Team:AITM-Nepal

From 2013.igem.org

(Difference between revisions)
 
(70 intermediate revisions not shown)
Line 1: Line 1:
<html>
<html>
<head>
<head>
-
        <style>
+
<style>
-
#catlinks,#top-section,#footer-box
+
/* Igm Css  Override */
-
{
+
-
display:none;
+
-
}
+
 +
#catlinks,#top-section,#footer-box,#top,#p-logo
 +
{
 +
display:none;
 +
}
 +
h1
 +
{
 +
display:none;
 +
}
 +
 +
/* Css Override Complete */
-
      body{
+
/* body layout start */
-
          background:#038c7e;
+
-
          }
+
 +
body
 +
{
 +
background:#aaaaaa;
 +
}
-
#p-logo
 
-
{
 
-
display:none;
 
-
}
 
-
#content
+
#content
-
{
+
{
-
background:#038c7e;
+
background:#aaaaaa;
-
}
+
width:auto;
 +
}
-
#access{
+
.AllContent
-
background: linear-gradient(#252525, #0A0A0A) repeat scroll 0 0 transparent;
+
{
-
    box-shadow: 0 1px 2px rgba(0, 0, 0, 0.4);
+
background:#FFFFFF;
-
    clear: both;
+
margin:auto;
-
    display: block;
+
width:1050px;
-
    float: left;
+
-webkit-box-shadow:rgb(110,110,110) 8px 8px 8px;
-
    margin: auto;
+
-
    margin-bottom:10px;
+
-
    width: 100%;
+
-
overflow:hidden;
+
}
}
-
+
        .maincontents
-
#access ul {
+
        {
-
    font-size: 13px;
+
        padding:10px;
-
    list-style: none outside none;
+
        }
-
    margin: 0 0 0 -0.8125em;
+
 
-
    padding-left: 0;
+
/* Body layout Complete */
 +
 
 +
/* Logos css start */
 +
 
 +
      .header
 +
        {
 +
      padding:20px;
 +
        }
 +
 
 +
#logo
 +
{
 +
width:150px;
 +
height:150px;
 +
margin-right:100px;
}
}
-
#access li {
+
#logo2
-
    float: left;
+
{
-
    margin-left:5px;
+
float:right;
-
    position: relative;
+
width:200px;
-
    list-style:none;
+
height:150px;
}
}
-
+
 
-
#access a{
+
/* Logos css Complete */
-
color: #EEEEEE;
+
 
-
    display: block;
+
/* Navbar css start */
-
    line-height: 3.333em;
+
 
-
    padding: 0 1.2125em;
+
 
-
    text-decoration: none;
+
.navbar
-
}
+
-
+
-
#access li:hover > a{
+
-
background: #efefef;
+
-
background: #f9f9f9; /* Show a solid color for older browsers */
+
-
background: -moz-linear-gradient(#f9f9f9, #e5e5e5);
+
-
background: -o-linear-gradient(#f9f9f9, #e5e5e5);
+
-
background: -webkit-gradient(linear, 0% 0%, 0% 100%, from(#f9f9f9), to(#e5e5e5)); /* Older webkit syntax */
+
-
background: -webkit-linear-gradient(#f9f9f9, #e5e5e5);
+
-
        padding-left:18px;
+
-
        padding-right:18px;
+
-
        -webkit-transition: -webkit-transform 1s, background 2s, padding-left 1s, padding-right 1s;
+
-
color: #373737;
+
-
}
+
-
+
-
#wrapper
+
{
{
-
background:#038c7e;
+
background:-webkit-linear-gradient(Top,#666,#000);
 +
width:1048px;
 +
height:50px;
 +
border:#000000 1px solid;
 +
-webkit-box-shadow:rgb(110,110,110) 0px 8px 8px;
 +
margin-bottom:20px;
}
}
 +
#navigationboxholder
 +
{
 +
        margin:auto;
 +
        width:1026px;
 +
        height:48px;
 +
        padding:10px;
 +
}
-
#headerbar
+
#navigation li
{
{
-
width:975;
+
display:inline;
-
height:100px;
+
list-style:none;
-
margin-bottom:15px;
+
-
margin:auto;
+
-
padding-left:10px;
+
}
}
 +
ul li .navbar-option
 +
{
 +
color:#FFF;
 +
padding-left:10px;
 +
padding-right:10px;
 +
padding-bottom:10px;
 +
padding-top:10px;
 +
text-decoration:none;
 +
}
-
h1
+
ul li .navbar-option:hover
{
{
-
display:none;
+
background:#0FF;
 +
border-top:black 1px solid;
 +
border-left:black 1px solid;
 +
padding-left:9px;
 +
padding-top:9px;
 +
color:#000;
 +
text-decoration:underline;
 +
-webkit-transition: background 1s, color 1s;
}
}
 +
.sub_navigation
 +
{
 +
display:none;
 +
list-style-type:none;
 +
padding:10px;
 +
position:absolute;
 +
background:#000000;
 +
color:#FFF;
 +
-webkit-box-shadow:rgb(110,110,110) 0px 8px 8px;
 +
}
 +
ul.sub_navigation li
 +
{
 +
clear:both;
 +
}
-
</style>
 
-
 
-
 
-
<script type="text/javascript">
 
-
 
-
var number=0;
 
-
 
-
var img = new Array(1);
 
-
img[0] = new Image();
 
-
img[0].src = "https://static.igem.org/mediawiki/2013/c/c3/Image1.png";
 
-
img[1] = new Image();
 
-
img[1].src= "https://static.igem.org/mediawiki/2013/7/77/Image020.jpg";
 
 +
/* navbar css complete */
 +
/*Image Slider css start */
-
function next(){
+
#box
-
number ++;
+
-
if (number>1)
+
{
{
-
number=0;
+
overflow:hidden;
 +
text-align:center;
 +
background-color:#2d2d2d;
 +
height:400px;
 +
width:900px;
 +
margin:auto;
 +
border-bottom:30px #666666 groove;
 +
border-bottom-left-radius:20px;
 +
border-bottom-right-radius:20px;
 +
border-top:30px #666666 groove;
 +
border-top-left-radius:20px;
 +
border-top-right-radius:20px;
 +
margin-top:20px;
}
}
-
document.slider.src = img[number].src;
 
-
}
 
-
 
-
function prev(){
 
-
number --;
 
-
if (number <0){
 
-
number = 1;
 
-
}
 
-
document.slider.src= img[number].src;
 
-
}
 
-
var intervalId = setInterval(function(){
+
/* Next and Previous Button css start */
-
number --;
+
#smallbox1
-
if (number <0){
+
{
-
number = 1;
+
position:absolute;
-
}
+
margin-top:180px;  
-
document.slider.src= img[number].src;
+
float:left;
 +
padding:20px;
 +
background:black;
 +
opacity:0.5;
 +
}
 +
 +
#smallbox2
 +
{
 +
position:absolute;
 +
margin-top:180px;
 +
margin-left:850px;
 +
padding:20px;
 +
background:black;
 +
opacity:0.5;
 +
}
 +
 +
#smallbox1:hover
 +
{
 +
opacity:0.8;
 +
}
 +
 +
#smallbox2:hover
 +
{
 +
opacity:0.8;
 +
}
-
}, 4000);
+
/* Next and Previous Button css Complete */
-
</script>
+
 +
/*Image Slider css Complete */
 +
</style>
-
</head>
+
<!-- Image Slider JavaScript Start -->
-
<body>
+
-
<script src="http://code.jquery.com/jquery-1.10.2.min.js"></script>
+
-
<script src="http://code.jquery.com/jquery-1.10.2.js"></script>
+
 +
<script type="text/javascript">
 +
   
 +
var number=0;
 +
 +
var img = new Array(2);
 +
img[0] = new Image();
 +
img[0].src = "https://static.igem.org/mediawiki/2013/c/c0/Aitmbanner_%282%29.png";
 +
 +
img[1] = new Image();
 +
img[1].src= "https://static.igem.org/mediawiki/2013/c/c0/Aitmbanner_%282%29.png";
 +
 +
img[2] = new Image();
 +
img[2].src= "https://static.igem.org/mediawiki/2013/c/c0/Aitmbanner_%282%29.png";
 +
   
 +
   
 +
   
 +
    function next(){
 +
number ++;
 +
if (number>0){
 +
number=0;
 +
}
 +
document.slider.src = img[number].src;
 +
        }
 +
       
 +
    function prev(){
 +
number --;
 +
if (number <0){
 +
number = 2;
 +
}
 +
document.slider.src= img[number].src;
 +
}
 +
   
 +
    var intervalId = setInterval(function(){
 +
number --;
 +
if (number <0){
 +
number = 2;
 +
}
 +
document.slider.src= img[number].src;
 +
        }, 4000);
-
<div id="headerbar">
 
-
<img src="https://static.igem.org/mediawiki/2013/d/d1/Hava1.png" height="98px' style="float:left;">
 
-
<a href="https://2013.igem.org/Main_Page"><img src="https://static.igem.org/mediawiki/2013/e/e3/Wiki1.png" style="float:right;" height="98px"></a>
 
-
</div>
+
 +
    </script>
-
<div style="margin-bottom:10px;">
+
<!-- Image Slider JavaScript Complete -->
-
<font size=6px color="white">Welcome to Team AITM_Nepal's Wiki!</font><br>
+
<script>
-
</div>
+
function togglemenu()
 +
{
 +
$('.sub_navigation').slideToggle();
 +
}
 +
</script>
-
<script type="text/javascript"> if (window.isMSIE55) fixalpha(); </script>
 
 +
</head>
 +
<body>
-
<div id="menubar" class="left-menu noprint">
+
<div class="AllContent">
-
  <ul>
+
-
                  <li class="selected"><a href="/Team:AITM-Nepal">Page              </a></li>
+
-
              <li class="new"><a href="/wiki/index.php?title=Talk:Team:AITM-Nepal&amp;action=edit&amp;redlink=1">Discussion              </a></li>
+
-
              <li><a href="/wiki/index.php?title=Team:AITM-Nepal&amp;action=edit">Edit              </a></li>
+
-
              <li><a href="/wiki/index.php?title=Team:AITM-Nepal&amp;action=history">History              </a></li>
+
-
              <li><a href="/Special:MovePage/Team:AITM-Nepal">Move              </a></li>
+
-
              <li><a href="/wiki/index.php?title=Team:AITM-Nepal&amp;action=unwatch">Unwatch              </a></li>
+
-
              <li style="color:white;cursor:default">teams</li>
+
-
  </ul>
+
-
</div> <!-- end menubar (left) -->
+
-
<div class="right-menu noprint" id="menubar">
+
<!-- Jquery src start -->
-
    <ul>
+
-
                <li id="pt-userpage"><a href="/User:Gmanandhar" title="Your user page [.]" accesskey="." class="new">Gmanandhar</a></li>                              <li id="pt-preferences"><a href="https://igem.org/User_Information" title="My account">My account</a></li>
+
-
                          <li id="pt-logout"><a href="/wiki/index.php?title=Special:UserLogout&amp;returnto=Team:AITM-Nepal" title="Log out">Log out</a></li>     </ul>
+
-
</div><!-- end right menubar -->
+
-
<!--
+
-
<div id="search-controls" class="noprint">
+
-
<form action="/Special:Search" id="searchform">
+
-
<input id="searchInput" name="search" type="text" title="Search 2013.igem.org [alt-f]" accesskey="f" value="" autocomplete="off">
+
-
<input type="submit" name="go" class="searchButton" id="searchGoButton" value="Go" title="Go to a page with this exact name if exists">&nbsp;
+
-
      <input type="submit" name="fulltext" class="searchButton" id="mw-searchButton" value="Search" title="Search the pages for this text">
+
-
</form>
+
-
</div> <!-- close search controls -->
+
-
<div id="wrapper">
+
<script src="http://code.jquery.com/jquery-1.10.2.min.js"></script>
 +
<script src="http://code.jquery.com/jquery-1.10.2.js"></script>
-
<div id="box" style="overflow:hidden; text-align:center; background-color:#2d2d2d; height:400px;">
+
<!-- Jquery src Complete -->
-
<div style="position:absolute; margin-top:180px; float:left; padding:20px; background:black; opacity:0.5; "><font color="white"><a href="" onClick="prev();"><</a></font></div>
+
<!-- Logo Section Start -->
-
<div style="position:absolute; margin-top:180px; margin-left:915px; padding:20px; background:black; opacity:0.5;  "><font color="white"><a href="" onClick="next();">></a></font></div>
+
 
-
<img src="https://static.igem.org/mediawiki/2013/c/c3/Image1.png" width=100% height=400px name="slider"/>
+
<div class="header">              
 +
    <img id="logo" src="https://static.igem.org/mediawiki/2013/d/d1/Hava1.png">
 +
<img src="https://static.igem.org/mediawiki/2013/8/8e/1186269_700314813316746_1614415077_n.png" width="500px" height="140px" style="margi:auto;">
 +
    <a href="https://2013.igem.org/Main_Page"><img id="logo2" src="https://static.igem.org/mediawiki/2013/e/e3/Wiki1.png"></a>
 +
</div>
 +
<!-- Logo Section Complete -->
 +
 +
<!-- Navbar Section Start -->
 +
 +
<div class="navbar">
 +
    <div id="navigationboxholder">
 +
        <ul id="navigation">
 +
               
 +
                <li><a  class="navbar-option" href="https://2013.igem.org/Team:AITM-Nepal">Home</a></li>
 +
                <li><a  class="navbar-option" href="https://2013.igem.org/Team:AITM-Nepal/Team">Team</a></li>
 +
                <li><a onMouseOver="togglemenu();" href="https://2013.igem.org/Team:AITM-Nepal/Project" class="navbar-option">Project</a>
 +
                            <ul class="sub_navigation">
 +
                                    <li><a href="https://2013.igem.org/Team:AITM-Nepal/Overview" class="navbar-option">Overview</a></li>
 +
                                    <li><a href="https://2013.igem.org/Team:AITM-Nepal/Device_made" class="navbar-option">Device Made</a></li>
 +
                                    <li><a href="https://2013.igem.org/Team:AITM-Nepal/Part1" class="navbar-option">Part 1</a></li>
 +
                                    <li><a href="https://2013.igem.org/Team:AITM-Nepal/Part2" class="navbar-option">Part 2</a></li>
 +
                                    <li><a href="https://2013.igem.org/Team:AITM-Nepal/Part3" class="navbar-option">Part 3</a></li>
 +
                            </ul></li>
 +
                <li><a class="navbar-option" href="https://igem.org/Team.cgi?year=2013&team_name=AITM-Nepal">Official Team Profile</a></li>
 +
                <li><a class="navbar-option" href="https://2013.igem.org/Team:AITM-Nepal/Parts">Parts Submitted To Registry</a></li>
 +
                <li><a class="navbar-option" href="https://2013.igem.org/Team:AITM-Nepal/Notebook">Notebook</a></li>
 +
                <li><a class="navbar-option" href="https://2013.igem.org/Team:AITM-Nepal/Safety">Safety</a></li>
 +
                <li><a class="navbar-option" href="https://2013.igem.org/Team:AITM-Nepal/Human_practise">Human Practice</a></li>
 +
                <li><a class="navbar-option" href="https://2013.igem.org/Team:AITM-Nepal/Attributions">Attributions</a></li>
 +
 +
    </ul>
 +
  </div>
</div>
</div>
 +
<!-- Navbar Section Complete -->
 +
                   
 +
<!-- Igm Javascript Start -->
 +
<script type="text/javascript"> if (window.isMSIE55) fixalpha(); </script>
 +
   
 +
   
 +
   
 +
            <div id="menubar" class="left-menu noprint">
 +
              <ul>
 +
                              <li class="selected"><a href="/Team:AITM-Nepal">Page              </a></li>
 +
                      <li class="new"><a href="/wiki/index.php?title=Talk:Team:AITM-Nepal&amp;action=edit&amp;redlink=1">Discussion              </a></li>
 +
                      <li><a href="/wiki/index.php?title=Team:AITM-Nepal&amp;action=edit">Edit              </a></li>
 +
                      <li><a href="/wiki/index.php?title=Team:AITM-Nepal&amp;action=history">History              </a></li>
 +
                      <li><a href="/Special:MovePage/Team:AITM-Nepal">Move              </a></li>
 +
                      <li><a href="/wiki/index.php?title=Team:AITM-Nepal&amp;action=unwatch">Unwatch              </a></li>
 +
                      <li style="color:white;cursor:default">teams</li>
 +
              </ul>
 +
            </div> <!-- end menubar (left) -->
 +
   
 +
            <div class="right-menu noprint" id="menubar">
 +
                <ul>
 +
                                        <li id="pt-userpage"><a href="/User:Gmanandhar" title="Your user page [.]" accesskey="." class="new">Gmanandhar</a></li>                              <li id="pt-preferences"><a href="https://igem.org/User_Information" title="My account">My account</a></li>
 +
                                                <li id="pt-logout"><a href="/wiki/index.php?title=Special:UserLogout&amp;returnto=Team:AITM-Nepal" title="Log out">Log out</a></li>     </ul>
 +
            </div><!-- end right menubar -->
 +
    <!--
 +
        <div id="search-controls" class="noprint">
 +
            <form action="/Special:Search" id="searchform">
 +
            <input id="searchInput" name="search" type="text" title="Search 2013.igem.org [alt-f]" accesskey="f" value="" autocomplete="off">
 +
                <input type="submit" name="go" class="searchButton" id="searchGoButton" value="Go" title="Go to a page with this exact name if exists">&nbsp;
 +
                  <input type="submit" name="fulltext" class="searchButton" id="mw-searchButton" value="Search" title="Search the pages for this text">
 +
            </form>
 +
        </div> <!-- close search controls -->
-
        <nav id="access">
+
<!-- Igm Javascript Ends -->                          
-
<div class="menu">
+
-
<ul>
+
-
<li>
+
-
<a href="https://2013.igem.org/Team:AITM-Nepal">Home</a>
+
-
</li>
+
-
<li>
+
-
<a href="https://2013.igem.org/Team:AITM-Nepal/Team">Team</a>
+
-
</li>
+
-
                        <li>
+
-
<a href="https://igem.org/Team.cgi?year=2013&team_name=AITM-Nepal">Official Team Profile</a>
+
-
</li>
+
-
                        <li>
+
-
<a href="https://2013.igem.org/Team:AITM-Nepal/Project">Project</a>
+
-
</li>
+
-
<li>
+
-
<a href="https://2013.igem.org/Team:AITM-Nepal/Parts">Parts Submitted To Registry</a>
+
-
</li>
+
-
                        <li>
+
-
<a href="https://2013.igem.org/Team:AITM-Nepal/Modeling">Modeling</a>
+
-
</li>
+
-
                        <li>
+
-
<a href="https://2013.igem.org/Team:AITM-Nepal/Notebook">Notebook</a>
+
-
</li>
+
-
<li>
+
-
<a href="https://2013.igem.org/Team:AITM-Nepal/Safety">Safety</a>
+
-
</li>
+
-
                        <li>
+
-
<a href="https://2013.igem.org/Team:AITM-Nepal/Attributions">Attributions</a>
+
-
</li>
+
-
</ul>
+
-
</div>
+
-
</nav>
+
-
<br/>
+
<div class="maincontents">
-
<div style="padding:'auto'; margin:10px;">
+
-
<h2><b><font color="white">Our Project:</font></b></h2>
+
<!-- Image Slider Section Starts -->
 +
    <div id="box">
 +
        <div id="smallbox1"><font color="white"><a href="" onClick="prev();"><</a></font></div>
 +
        <div id="smallbox2"><font color="white"><a href="" onClick="next();">></a></font></div>
 +
        <img src="https://static.igem.org/mediawiki/2013/c/c0/Aitmbanner_%282%29.png" width=100% height=400px name="slider"/>
 +
    </div>
 +
   
 +
<!-- Image Slider Section Complete -->
-
<h3><b><font color="white">ImmunEcoli</font></b></h3>
+
<br/>
-
<font color="white">This is the first approach for Synthetic Biology from Nepal. We are a team of Undergrads of Biotechnology from Asian Institute of Technology and Management. This year we are trying to engineer ''Escherichia coli'' which will be used as a carrier and immune modulation point using Outer Membrane Vesicle (OMVs). ''Escherichia coli'', being a model organism, is easier to work with , especially for the purpose of genetically engineered realm.
+
<!-- Main Content Section Starts -->
-
Contact us: aitmnepal2013@gmail.com
+
 
-
</font>
+
<div>
 +
 
 +
    <a href="http://www.aitm.edu.np"><img id="logo3" src="https://static.igem.org/mediawiki/2013/2/27/Team_AITM-NEPAL.gif"></a><br><br>
 +
   
 +
    <h2><b><font color="#000000" face="Georgia">Our Project:</font></b></h2>
 +
   
 +
    <h3><b><font color="#000000" face="Georgia">ImmunEcoli</b></h3>
 +
   
 +
    This is the first approach for Synthetic Biology from Nepal. We are a team of Undergrads of Biotechnology from Asian Institute of Technology and Management. This year we are trying to engineer ''Escherichia coli'' which will be used as a carrier and immune modulation point using Outer Membrane Vesicle (OMVs). ''Escherichia coli'', being a model organism, is easier to work with , especially for the purpose of genetically engineered realm.
 +
   
 +
    Canonical small interfering RNA (siRNA) duplexes are potent activators of the mammalian innate immune system. The induction of innate immunity by siRNA is dependent on siRNA structure and sequence, method of delivery, and cell type. The delivery of siRNA in a packaged outer membrane vesicle of gram negative bacteria is the theme of our work. The toll like receptor-7/8 activation by siRNA in order to boost the production of Interferon type -1 molecules to inhibit the viral and outer membrane LPS structure to activate Toll like receptor -4 to inhibit bacterial pathogens is the objective of this work. The delivery is made dependent on the peptide fragment which mediated the fusogenic mechanism so as to escape the endosomal compartment once endocytosed inside host(mamalian) cell. Thus freeing the siRNA to silence the myD88 transcript in host cytoplasm making RISC complex and hence, activating TLR-7/8 in endosomal membrane formerly.
 +
    Contact us: aitmnepal2013@gmail.com
 +
<br>
 +
<h2>Sponsors:</h2>
 +
<hr>
 +
<a href="http://www.cmdn.org.np/main/"><img src="https://static.igem.org/mediawiki/2013/7/78/Cmdnlogo.jpg"></a>
 +
</div>
</div>
</div>
</div>
</div>
 +
<!-- Main Content Section Complete -->

Latest revision as of 20:07, 21 November 2014




Our Project:

ImmunEcoli

This is the first approach for Synthetic Biology from Nepal. We are a team of Undergrads of Biotechnology from Asian Institute of Technology and Management. This year we are trying to engineer ''Escherichia coli'' which will be used as a carrier and immune modulation point using Outer Membrane Vesicle (OMVs). ''Escherichia coli'', being a model organism, is easier to work with , especially for the purpose of genetically engineered realm. Canonical small interfering RNA (siRNA) duplexes are potent activators of the mammalian innate immune system. The induction of innate immunity by siRNA is dependent on siRNA structure and sequence, method of delivery, and cell type. The delivery of siRNA in a packaged outer membrane vesicle of gram negative bacteria is the theme of our work. The toll like receptor-7/8 activation by siRNA in order to boost the production of Interferon type -1 molecules to inhibit the viral and outer membrane LPS structure to activate Toll like receptor -4 to inhibit bacterial pathogens is the objective of this work. The delivery is made dependent on the peptide fragment which mediated the fusogenic mechanism so as to escape the endosomal compartment once endocytosed inside host(mamalian) cell. Thus freeing the siRNA to silence the myD88 transcript in host cytoplasm making RISC complex and hence, activating TLR-7/8 in endosomal membrane formerly. Contact us: aitmnepal2013@gmail.com

Sponsors: