Team:SUSTC-Shenzhen-B/clotho.html
From 2013.igem.org
m |
|||
(10 intermediate revisions not shown) | |||
Line 1: | Line 1: | ||
<html> | <html> | ||
- | + | <head> | |
- | + | <meta charset="utf-8" /> | |
- | + | <meta http-equiv="content-type" content="text/html; charset=UTF-8" /> | |
- | + | ||
- | + | <meta name="description" content="" /> | |
- | + | <meta name="author" content="SUSTC-ShenZhen-B" /> | |
- | + | ||
- | + | <title>SUSTC-ShenZhen-B</title> | |
- | + | ||
- | + | <style type="text/css"> | |
- | + | #globalWrapper {width: 100%;font-size: 100%;} | |
- | + | #top-section {width: 100%; height:100%; border:none;} | |
- | + | #p-logo {display:none;} | |
- | + | #search-controls {display:none;} | |
- | + | .printfooter {display:none;} | |
- | + | #footer-box {border:none;} | |
- | + | .firstHeading {display:none;} | |
- | + | #content { border:none !important; width:1024px !important; background: url('') !important;} | |
- | + | #bodyContent {border:none;} | |
- | + | #catlinks {display:none;} | |
- | + | #footer-box {display:none;} | |
- | + | #menubar {display:none;} | |
- | + | body { | |
- | + | padding: 0; | |
- | + | } | |
- | + | ||
- | + | .caret { | |
- | + | display: inline-block; | |
- | + | width: 0; | |
- | + | height: 0; | |
- | + | margin-left: 2px; | |
- | + | vertical-align: middle; | |
- | + | border-top: 4px solid #000000; | |
- | + | border-right: 4px solid transparent; | |
- | + | border-bottom: 0 dotted; | |
- | + | border-left: 4px solid transparent; | |
- | + | content: ""; | |
- | + | } | |
- | + | .icon.caret { | |
- | + | opacity: 0.75; | |
- | + | } | |
- | + | .white.caret { | |
- | + | border-top-color: #FFFFFF; | |
- | + | } | |
- | + | .main.menu { | |
- | + | top: 0; | |
- | + | } | |
- | + | .script.image { | |
- | + | display: none; | |
- | + | } | |
- | + | .minimize { | |
- | + | max-width: 90%; | |
- | + | } | |
- | + | </style> | |
- | + | <link rel="stylesheet" type="text/css" href="/SUSTC-SZ-B_2013iGEM/CSS/wiki-all.min.css?action=raw&ctype=text/css" /> | |
- | + | <link rel="stylesheet" type="text/css" href="http://fonts.googleapis.com/css?family=Source+Sans+Pro:400,700|Open+Sans:300italic,400,300,700" /> | |
- | + | ||
- | + | </head> | |
- | + | <body id="example"> | |
- | + | <div class="ui fixed transparent inverted main menu"> | |
- | + | <div class="container"> | |
- | + | <a href="#" class="brand">SUSTC-ShenZhen-B</a> | |
- | + | <div class="right menu"> | |
- | + | <a href="http://circuitplus.org" class="item">Visit Circuit+</a> | |
- | + | </div> | |
- | + | <div href="/" class="ui dropdown link item"> | |
- | + | iGEM | |
- | + | <span class="icon white caret"></span> | |
- | + | <div class="menu"> | |
- | + | <a href="https://2013.igem.org/Main_Page" class="item">iGEM homepage</a> | |
- | + | <a href="/Team:SUSTC-Shenzhen-B" class="item">wiki homepage</a> | |
- | + | <a href="https://igem.org/User_Information" class="item">My Account</a> | |
- | + | <a href="/wiki/index.php?title=Team:SUSTC-Shenzhen-B/clotho.html&action=edit" class="item">Edit</a> | |
- | + | </div> | |
- | + | </div> | |
- | + | <a href="project.html" class="item">Overview</a> | |
- | + | <a href="standard.html" class="item">Standard and database</a> | |
- | + | <div href="/Team:SUSTC-Shenzhen-B/Software" class="ui dropdown link active item"> | |
- | + | Software | |
- | + | <span class="white caret"></span> | |
- | + | <div class="menu"> | |
- | + | <a href="circuitplus.html" class="item">Circuit+</a> | |
- | + | <a href="tutorial.html" class="item">Tutorial</a> | |
- | + | <a href="safety.html" class="item">Safety</a> | |
- | + | <a href="feedback.html" class="item">Feedback</a> | |
- | + | <a href="future.html" class="item">Future</a> | |
- | + | <a href="lab.html" class="item">Lab Manager</a> | |
- | + | <a href="clotho.html" class="item">Clotho</a> | |
- | + | </div> | |
- | + | </div> | |
- | + | <div href="/Team:SUSTC-Shenzhen-B/HumanPractice" class="ui dropdown link item"> | |
- | + | Human practice | |
- | + | <span class="white caret"></span> | |
- | + | <div class="menu"> | |
- | + | <a href="workshop.html" class="item">Workshop meeting</a> | |
- | + | <a href="publicity.html" class="item">Publicity</a> | |
- | + | </div> | |
- | + | </div> | |
- | + | <a href="achievement.html" class="item">Achievement</a> | |
- | + | <div href="/Team:SUSTC-Shenzhen-B/Team" class="ui dropdown link item"> | |
- | + | Team | |
- | + | <span class="white caret"></span> | |
- | + | <div class="menu"> | |
- | + | <a href="about.html" class="item">About us</a> | |
- | + | <a href="notebook.html" class="item">Notebook</a> | |
- | + | <a href="acknowledgement.html" class="item">Acknoledgement</a> | |
- | + | </div> | |
- | + | </div> | |
- | + | </div> | |
- | + | </div> | |
- | + | <div class="header"> | |
- | + | <div class="segment"> | |
- | + | <div id="overview" class="container"> | |
- | + | <div class="introduction"> | |
- | + | <h1 class="ui dividing header">Clotho</h1> | |
- | + | <p class="lead">Clotho applications.</p> | |
- | + | </div> | |
- | + | </div> | |
- | + | </div> | |
- | + | </div> | |
+ | <div class="main container page"> | ||
+ | <div class="peek"> | ||
+ | <div class="ui vertical pointing secondary menu"> | ||
+ | <a class="active item">Introduction</a> | ||
+ | <a class="item">Circuit List</a> | ||
+ | <a class="item">TTEC</a> | ||
+ | <a class="active item" href="/Team:SUSTC-Shenzhen-B">Back to Homepage</a> | ||
+ | </div> | ||
+ | </div> | ||
+ | <div class="page-container"> | ||
+ | <h2 class="ui dividing header">Introduction</h2> | ||
+ | <section id=""></section> | ||
+ | <p>Clotho is a popular software framework in synthetic biology. It provides many applications which are very useful in synthetic biology. It can also extend itself by utilizing applications developed by others. So, in order to enrich the function of Clotho and to make more people experience our software, we developed two applications, Circuit List and TTEC.</p> | ||
+ | <h2 class="ui dividing header">Circuit List</h2> | ||
+ | <section id=""></section> | ||
+ | <p>We developed a Clotho verion of Circuit+, Circuit List. Though it's not very perfect, it can make users experience Circuit+ on Clotho.</p> | ||
+ | <img class="minimize" src="https://static.igem.org/mediawiki/2013/e/eb/Circuit_list_all.png" /> | ||
+ | <h2 class="ui dividing header">TTEC</h2> | ||
+ | <section id=""></section> | ||
+ | <p>TTEC, which is short for Transcriptional Terminator Efficiency Calculator, was developed by team SUSTC-Shenzhen-B in 2012. It calculate the efficiency of transcription terminator from the primary nucleotide sequences. We transplanted TTEC to Clotho platform to make more people use this useful tool. And this is prompted by iGEM that use existing iGEM software to develop new tools.If you want to know more about TTEC, the older one, please visit <a href="https://2012.igem.org/Team:SUSTC-Shenzhen-B">wiki of SUSTC-Shenzhen-B 2012</a>. </p> | ||
+ | <img class="minimize" src="https://static.igem.org/mediawiki/2013/7/71/Ttec_all.png" /> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | <div class="footer"> | ||
+ | <div class="ui divider"> | ||
+ | </div> | ||
+ | <div class="ui divided horizontal footer link list"> | ||
+ | <div class="item"> | ||
+ | © SUSTC-ShenZhen-B | ||
+ | </div> | ||
+ | </div> | ||
+ | </div> | ||
+ | |||
+ | <script type="text/javascript" src="http://code.jquery.com/jquery-2.0.3.min.js"></script> | ||
+ | <script type="text/javascript" src="https://2013.igem.org/SUSTC-SZ-B_2013iGEM/JS/wiki-all.min.js?action=raw&ctype=text/javascript"></script> | ||
+ | |||
+ | <script type="text/javascript"> | ||
+ | function png2text(pngurl, id, callback) { | ||
+ | var canvas = document.createElement("canvas"), | ||
+ | ctx = canvas.getContext("2d"); | ||
+ | img = new Image(); | ||
+ | |||
+ | img.id = 'pt-' + id; | ||
+ | img.className = 'script image'; | ||
+ | img.style.position = "absolute"; | ||
+ | img.style.left = "-10000px"; | ||
+ | document.body.appendChild(img); | ||
+ | |||
+ | img.onload = function() { | ||
+ | var | ||
+ | w = this.width, | ||
+ | h = this.height; | ||
+ | |||
+ | canvas.width = w; | ||
+ | canvas.height = h; | ||
+ | canvas.style.width = w+"px"; | ||
+ | canvas.style.height = h+"px"; | ||
+ | |||
+ | ctx.drawImage(this, 0, 0); | ||
+ | |||
+ | var data = ctx.getImageData(0, 0, w, h).data, | ||
+ | a = [], | ||
+ | len = data.length, | ||
+ | p = -1; | ||
+ | |||
+ | for (var i=0; i < len; i += 4) { | ||
+ | if (data[i] > 0) | ||
+ | a[++p] = String.fromCharCode(data[i]); | ||
+ | }; | ||
+ | |||
+ | canvas = undefined; | ||
+ | try { | ||
+ | //document.body.removeChild(img); | ||
+ | $('#pt-' + id).remove(); | ||
+ | } catch (e) { | ||
+ | } | ||
+ | |||
+ | if (callback) callback(a.join("")); | ||
+ | }; | ||
+ | |||
+ | img.src = pngurl; | ||
+ | } | ||
+ | |||
+ | function baseRemove() { | ||
+ | $('#top-section').remove(); | ||
+ | $('#content').attr('id', ''); | ||
+ | $('#bodyContent').attr('id', ''); | ||
+ | $('#globalWrapper').attr('id', ''); | ||
+ | |||
+ | $('.main.container.page').parent().attr('id', 'example'); | ||
+ | } | ||
+ | |||
+ | function loadJavascript() { | ||
+ | /* $.get("https://2013.igem.org/SUSTC-SZ-B_2013iGEM/JS/wiki-all.min.js?action=raw&ctype=text/javascript", function (data) { | ||
+ | eval(data); | ||
+ | }); */ | ||
+ | /* png2text('https://static.igem.org/mediawiki/2013/4/43/Wiki-all-min-js.png', 'wiki-all', function (text) { | ||
+ | eval(text); | ||
+ | }); */ | ||
+ | } | ||
+ | |||
+ | $(document).ready(function () { | ||
+ | baseRemove(); | ||
+ | loadJavascript(); | ||
+ | }); | ||
+ | </script> | ||
+ | </body> | ||
</html> | </html> |
Latest revision as of 03:53, 29 October 2013
Clotho
Clotho applications.
Introduction
Clotho is a popular software framework in synthetic biology. It provides many applications which are very useful in synthetic biology. It can also extend itself by utilizing applications developed by others. So, in order to enrich the function of Clotho and to make more people experience our software, we developed two applications, Circuit List and TTEC.
Circuit List
We developed a Clotho verion of Circuit+, Circuit List. Though it's not very perfect, it can make users experience Circuit+ on Clotho.
TTEC
TTEC, which is short for Transcriptional Terminator Efficiency Calculator, was developed by team SUSTC-Shenzhen-B in 2012. It calculate the efficiency of transcription terminator from the primary nucleotide sequences. We transplanted TTEC to Clotho platform to make more people use this useful tool. And this is prompted by iGEM that use existing iGEM software to develop new tools.If you want to know more about TTEC, the older one, please visit wiki of SUSTC-Shenzhen-B 2012.