Team:TU Darmstadt/protocols/Dephosphorylation
From 2013.igem.org
(Difference between revisions)
(2 intermediate revisions not shown) | |||
Line 2: | Line 2: | ||
<style type="text/css"> | <style type="text/css"> | ||
- | body | + | body |
{ | { | ||
margin:0; | margin:0; | ||
Line 15: | Line 15: | ||
{ | { | ||
background-color: white; | background-color: white; | ||
- | background-image: url("/wiki/images/ | + | background-image: url("/wiki/images/5/5c/Hintergrund_Grün(ohne_Header%2C_Logo_und_Schlagschatten).jpg"); |
background-attachment: scroll; | background-attachment: scroll; | ||
background-position: 50% 0; | background-position: 50% 0; | ||
Line 26: | Line 26: | ||
{ | { | ||
background: white; | background: white; | ||
- | background-image: url( | + | background-image: url("/wiki/images/2/2f/Header_%28mit_Logo%29.jpg"); |
margin: 0 auto; | margin: 0 auto; | ||
height:250px ; | height:250px ; | ||
Line 35: | Line 35: | ||
background-repeat: no-repeat; | background-repeat: no-repeat; | ||
background-size: 100% 100% ; | background-size: 100% 100% ; | ||
- | border-style: none; | + | border-style: none;;} |
- | } | + | |
#p-logo { display:none;} | #p-logo { display:none;} | ||
Line 42: | Line 41: | ||
p {line-height:1.5em; margin:0 0 15px; text-align:justify; color:white;} | p {line-height:1.5em; margin:0 0 15px; text-align:justify; color:white;} | ||
h1 {font-size:1.8em; font-weight:400; margin:0 0 12px;} | h1 {font-size:1.8em; font-weight:400; margin:0 0 12px;} | ||
+ | |||
#mm_icon1 | #mm_icon1 | ||
{ | { | ||
position: absolute; | position: absolute; | ||
- | top: | + | top: 150px; |
- | left: | + | left: 30px; |
} | } | ||
#mm_icon2 | #mm_icon2 | ||
{ | { | ||
- | position: | + | position: absolute; |
- | top: | + | top: 150px; |
left: 350px; | left: 350px; | ||
} | } | ||
Line 67: | Line 67: | ||
{ | { | ||
position: absolute; | position: absolute; | ||
- | top: | + | top: 150px; |
- | left: | + | left: 30px; |
background:white; | background:white; | ||
filter:alpha(opacity=83); opacity:0.83; | filter:alpha(opacity=83); opacity:0.83; | ||
Line 80: | Line 80: | ||
{ | { | ||
position: absolute; | position: absolute; | ||
- | top: | + | top: 150px; |
left: 350px; | left: 350px; | ||
background:white; | background:white; | ||
Line 89: | Line 89: | ||
border-radius:15px; | border-radius:15px; | ||
} | } | ||
+ | |||
+ | |||
#abstracticon3 | #abstracticon3 | ||
Line 94: | Line 96: | ||
position: absolute; | position: absolute; | ||
top: 150px; | top: 150px; | ||
- | left: | + | left: 670px; |
background:white; | background:white; | ||
filter:alpha(opacity=83); opacity:0.83; | filter:alpha(opacity=83); opacity:0.83; | ||
Line 102: | Line 104: | ||
border-radius:15px; | border-radius:15px; | ||
} | } | ||
- | |||
#taskbar | #taskbar | ||
Line 108: | Line 109: | ||
position:absolute; | position:absolute; | ||
top:10px; | top:10px; | ||
- | left: | + | left:500px; |
z-index: 5; | z-index: 5; | ||
+ | } | ||
+ | |||
+ | |||
+ | |||
+ | |||
+ | dl.igemTUD2013gelpicture | ||
+ | { | ||
+ | border: 1px solid #000; | ||
+ | background-color: #109f71; | ||
+ | width: 110px; | ||
+ | text-align: center; | ||
+ | padding: 5px 5px 5px 5px; | ||
+ | float: right; | ||
+ | margin: 0 0 0 0; | ||
+ | margin-left:15px | ||
+ | } | ||
+ | |||
+ | .igemTUD2013gelpicture dt | ||
+ | { | ||
+ | font-weight: bold; | ||
+ | background-color: #131210; | ||
+ | color: #959289; | ||
+ | padding: 0 0; | ||
+ | margin-bottom: 10px; | ||
+ | } | ||
+ | |||
+ | .igemTUD2013gelpicture dd img | ||
+ | { | ||
+ | border: 1px solid #000; | ||
+ | width: 100px; | ||
+ | height: 200px; | ||
+ | } | ||
+ | |||
+ | .igemTUD2013gelpicture dd | ||
+ | { | ||
+ | margin: 0; | ||
+ | padding: 5px 5px 5px 5px; | ||
+ | font-size: 100%; | ||
+ | text-align: left; | ||
+ | } | ||
+ | |||
+ | |||
+ | |||
+ | |||
+ | dl.igemTUD2013gelpicture2 | ||
+ | { | ||
+ | border: 1px solid #000; | ||
+ | background-color: #109f71; | ||
+ | width: 210px; | ||
+ | text-align: center; | ||
+ | padding: 5px 5px 5px 5px; | ||
+ | float: right; | ||
+ | margin: 0 0 0 0; | ||
+ | margin-left:15px | ||
+ | } | ||
+ | |||
+ | .igemTUD2013gelpicture2 dt | ||
+ | { | ||
+ | font-weight: bold; | ||
+ | background-color: #131210; | ||
+ | color: #959289; | ||
+ | padding: 0 0; | ||
+ | margin-bottom: 10px; | ||
+ | } | ||
+ | |||
+ | .igemTUD2013gelpicture2 dd img | ||
+ | { | ||
+ | border: 1px solid #000; | ||
+ | width: 200px; | ||
+ | height: 200px; | ||
+ | } | ||
+ | |||
+ | .igemTUD2013gelpicture2 dd | ||
+ | { | ||
+ | margin: 0; | ||
+ | padding: 5px 5px 5px 5px; | ||
+ | font-size: 100%; | ||
+ | } | ||
+ | LI.list1 {list-style: none; color:white;} | ||
+ | .blacktext {color:black} | ||
+ | p, ul { | ||
+ | padding: 0; | ||
+ | margin: 0; | ||
} | } | ||
</style> | </style> | ||
+ | |||
+ | <body> | ||
+ | |||
+ | <center> | ||
+ | <!-- central main menu --> | ||
+ | |||
+ | <br> | ||
+ | <br> | ||
<!-- Taskbar --> | <!-- Taskbar --> | ||
Line 122: | Line 214: | ||
<img alt="Problem" src="/wiki/images/6/66/Darmstadt_green_Problem.jpg" width="100" height="30"></a> | <img alt="Problem" src="/wiki/images/6/66/Darmstadt_green_Problem.jpg" width="100" height="30"></a> | ||
- | |||
- | |||
<a href="https://2013.igem.org/Team:TU_Darmstadt/result"> | <a href="https://2013.igem.org/Team:TU_Darmstadt/result"> | ||
Line 145: | Line 235: | ||
<a href="https://2013.igem.org/Team:TU_Darmstadt/labbook"> | <a href="https://2013.igem.org/Team:TU_Darmstadt/labbook"> | ||
- | <img alt="team" src="/wiki/images/ | + | <img alt="team" src="/wiki/images/4/4c/10._Labbook_(angewählt).jpg" width="90" height="30"></a> |
</div> | </div> | ||
- | < | + | |
+ | <br><br><br><br> | ||
<center> | <center> | ||
+ | <a href="https://2013.igem.org/Team:TU_Darmstadt/labbook"> | ||
+ | <font size="8" color="#F0F8FF" face="Arial regular">Lab book |</font> | ||
+ | </a> | ||
+ | <a href="https://2013.igem.org/Team:TU_Darmstadt/materials"> | ||
+ | <font size="8" color="#F0F8FF" face="Arial regular">Materials |</font> | ||
+ | </a> | ||
+ | <a href="https://2013.igem.org/Team:TU_Darmstadt/protocols"> | ||
+ | <font size="8" color="#F0F8FF" face="Arial regular">Protocols</font> | ||
+ | </a> | ||
+ | </center> | ||
<br> | <br> | ||
- | < | + | <!-- Dephosphorylation --> |
- | < | + | <center> |
- | + | ||
<h2><font size="6" color="#F0F8FF" face="Arial regular"> Dephosphorylation </font></h2> | <h2><font size="6" color="#F0F8FF" face="Arial regular"> Dephosphorylation </font></h2> | ||
<div id="all"> | <div id="all"> |
Latest revision as of 00:33, 5 October 2013
Dephosphorylation
Short explanation
Antarctic Phosphatase catalyzes the removal of 5' phosphate groups of DNA and RNA and thus prevents religation of cut vectors. It is used before ligation.
Procedure
The reaction mix contains:
up to 5 µg of digested DNA (no purification needed)
1/10 of reaction volume of 10x Antarctic Phosphatase Reaction Buffer
1 µL of Antarctic Phosphatase
Incubate at 37° C for 30 minutes (3' ends) or 60 minutes (5' ends)
Heat inactivate at 65° C for 15 minutes
Continue with ligation