Team:Exeter/Parts

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{| style="color:#2F2F4F;background-color:#B9D3EE;" cellpadding="3" cellspacing="1" align="center"
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<div class="container">
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!align="center"|[[Team:Exeter|Home]]
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!align="center"|[[Team:Exeter/Team|Team]]
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!align="center"|[https://igem.org/Team.cgi?year=2013&team_name=Exeter Official Team Profile]
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== Parts ==
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!align="center"|[[Team:Exeter/Project|Project]]
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!align="center"|[[Team:Exeter/Parts|Part Submissions]]
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!align="center"|[[Team:Exeter/Modelling|Modelling]]
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!align="center"|[[Team:Exeter/Notebook|Notebook]]
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!align="center"|[[Team:Exeter/Safety|Safety]]
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!align="center"|[[Team:Exeter/Attributions|Attributions]]
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''This page will document the parts that Exeter iGEM 2013 submit to the biobrick registry.''
''This page will document the parts that Exeter iGEM 2013 submit to the biobrick registry.''
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Our aim is to submit a composite biobrick for E. coli which will allow control three genes of your choice using Red, Green and Blue ([http://en.wikipedia.org/wiki/RGB_color_model RGB]) light. We will also submit the three constituent bio-bricks for each light input. See our [[Team:Exeter/Project|project section]] for details about our bio-bricks.
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Our aim is to submit a composite biobrick for <i>E. coli</i> which will allow control three genes of your choice using red, green and blue ([http://en.wikipedia.org/wiki/RGB_color_model RGB]) light. We have successful sent in the composite part for the green light module ([http://parts.igem.org/wiki/index.php?title=Part:BBa_K1173501]). We also aim to create constituent bio-bricks for red/blue/green light input matching cyan/yellow/magenta pigments respectively. We have managed to submit a brick for the red light module (includes the cyan pigment, see [http://parts.igem.org/wiki/index.php?title=Part:BBa_K1173500]). We will also submit a constituent bio-brick for red light input with cut sites to allow input of your favourite gene ([http://parts.igem.org/wiki/index.php?title=Part:BBa_K1173502]). See our [[Team:Exeter/Project|project section]] for details about our bio-bricks.
We plan to extensively characterise our system and provide a mathematical model of our system for quantative control of outputs. See our [[Team:Exeter/Modelling|modelling section]].
We plan to extensively characterise our system and provide a mathematical model of our system for quantative control of outputs. See our [[Team:Exeter/Modelling|modelling section]].
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'''Table including all of the parts we are hoping to utilise'''
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{| class="wikitable"
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|-
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! Part Code and link to Registry page !! Name of Part
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|-
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|[http://parts.igem.org/wiki/index.php?title=Part:BBa_K608002 BBa_K608002] || Strong promoter and strong RBS
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_I712074 BBa_I712074] || T7 promoter
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_B0015 BBa_B0015] || Terminator
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_Q04510 BBa_Q04510] || lambda cI inverter system
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K322124 BBa_K322124] || Cph8 red light sensor with RBS, version one
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592018 BBa_K592018]|| Cph8 red light sensor with RBS, version two
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K098011 BBa_K098011] || OmpR, the protein which communicates between the red light sensor and the cyan pigment gene
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_R0082 BBa_R0082] || OmpR specific promoter, only allows transcription when OmpR-P is present
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K322122 BBa_K322122] || Cyan pigment, version one (composed of HO1 and pcyA, makes phycocyanobillin)
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K909000 BBa_K909000] || Cyan pigment, version one, includes stronger RBS than BBa_K322122
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592011 BBa_K592011] || Cyan pigment, version two
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K864404 BBa_K864404] || Cyan pigment, version two, includes a promoter and RBS
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592022 BBa_K592022] || Cyan pigment, version two, includes a alternative promoter and RBS
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592004 BBa_K592004] || YF1 blue light sensor
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592005 BBa_K592005] || FixJ, the protein which communicates between the blue light sensor and the yellow pigment gene
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592006 BBa_K592006] || FixJ specific promoter, only allows transcription when FixJ-P is present
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592010 BBa_K592010] || Yellow pigment, version one
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_S05058 BBa_S05058] || Yellow pigment, version one, with added RBS
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592001 BBa_K592001] || CcaS green light sensor
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592002 BBa_K592002] || CcaR, the protein which communicates between the green light sensor and the lambda inverter system
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592017 BBa_K592017] || Combined CcaS and CcaR with RBS before each
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592003 BBa_K592003] || CcaR specific promoter, only allows transcription when CcaR-P is '''NOT''' present
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_K592012 BBa_K592012] || Magenta pigment
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_J04450 BBa_KJ04450] || RFP control
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|-
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| [http://parts.igem.org/wiki/index.php?title=Part:BBa_I746915 BBa_I746915] || Superfolder GFP
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|}
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[[File:John's plasmid designs.png|left||900px|Image: 900 pixels]]
<groupparts>iGEM013 Exeter</groupparts>
<groupparts>iGEM013 Exeter</groupparts>
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{{:Team:Exeter/Template/Footer}}

Latest revision as of 00:23, 5 October 2013

Exeter iGEM 2013 · Paint by Coli

Parts

This page will document the parts that Exeter iGEM 2013 submit to the biobrick registry.

Our aim is to submit a composite biobrick for E. coli which will allow control three genes of your choice using red, green and blue ([http://en.wikipedia.org/wiki/RGB_color_model RGB]) light. We have successful sent in the composite part for the green light module ([http://parts.igem.org/wiki/index.php?title=Part:BBa_K1173501]). We also aim to create constituent bio-bricks for red/blue/green light input matching cyan/yellow/magenta pigments respectively. We have managed to submit a brick for the red light module (includes the cyan pigment, see [http://parts.igem.org/wiki/index.php?title=Part:BBa_K1173500]). We will also submit a constituent bio-brick for red light input with cut sites to allow input of your favourite gene ([http://parts.igem.org/wiki/index.php?title=Part:BBa_K1173502]). See our project section for details about our bio-bricks.

We plan to extensively characterise our system and provide a mathematical model of our system for quantative control of outputs. See our modelling section.

Table including all of the parts we are hoping to utilise

Part Code and link to Registry page Name of Part
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K608002 BBa_K608002] Strong promoter and strong RBS
[http://parts.igem.org/wiki/index.php?title=Part:BBa_I712074 BBa_I712074] T7 promoter
[http://parts.igem.org/wiki/index.php?title=Part:BBa_B0015 BBa_B0015] Terminator
[http://parts.igem.org/wiki/index.php?title=Part:BBa_Q04510 BBa_Q04510] lambda cI inverter system
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K322124 BBa_K322124] Cph8 red light sensor with RBS, version one
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592018 BBa_K592018] Cph8 red light sensor with RBS, version two
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K098011 BBa_K098011] OmpR, the protein which communicates between the red light sensor and the cyan pigment gene
[http://parts.igem.org/wiki/index.php?title=Part:BBa_R0082 BBa_R0082] OmpR specific promoter, only allows transcription when OmpR-P is present
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K322122 BBa_K322122] Cyan pigment, version one (composed of HO1 and pcyA, makes phycocyanobillin)
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K909000 BBa_K909000] Cyan pigment, version one, includes stronger RBS than BBa_K322122
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592011 BBa_K592011] Cyan pigment, version two
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K864404 BBa_K864404] Cyan pigment, version two, includes a promoter and RBS
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592022 BBa_K592022] Cyan pigment, version two, includes a alternative promoter and RBS
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592004 BBa_K592004] YF1 blue light sensor
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592005 BBa_K592005] FixJ, the protein which communicates between the blue light sensor and the yellow pigment gene
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592006 BBa_K592006] FixJ specific promoter, only allows transcription when FixJ-P is present
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592010 BBa_K592010] Yellow pigment, version one
[http://parts.igem.org/wiki/index.php?title=Part:BBa_S05058 BBa_S05058] Yellow pigment, version one, with added RBS
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592001 BBa_K592001] CcaS green light sensor
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592002 BBa_K592002] CcaR, the protein which communicates between the green light sensor and the lambda inverter system
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592017 BBa_K592017] Combined CcaS and CcaR with RBS before each
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592003 BBa_K592003] CcaR specific promoter, only allows transcription when CcaR-P is NOT present
[http://parts.igem.org/wiki/index.php?title=Part:BBa_K592012 BBa_K592012] Magenta pigment
[http://parts.igem.org/wiki/index.php?title=Part:BBa_J04450 BBa_KJ04450] RFP control
[http://parts.igem.org/wiki/index.php?title=Part:BBa_I746915 BBa_I746915] Superfolder GFP
Image: 900 pixels

<groupparts>iGEM013 Exeter</groupparts>

Exeter iGEM 2013 · Paint by Coli

Retrieved from "http://2013.igem.org/Team:Exeter/Parts"