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- | <title>BostonU iGEM Team: Welcome</title> | + | <h2>Acknowledgements</h2> |
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- | /*actual content styles*/ | + | <p><center><img src="https://static.igem.org/mediawiki/2013/7/7d/Cidar_logo.png" width="300px"></a></center></p> |
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- | #bu-wellesley_wiki_content {height:auto; line-height:100%;}
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| + | <tr> |
| + | <td><center><h7>Professor Douglas Densmore</h7><br><h7>Principal Investigator</h7></center></td> |
| + | <td><center><h7>Dr. Swapnil Bhatia</h7><br><h7>Puppeteer</h7></center></td> |
| + | <td><center><h7>Dr. Ernst Oberortner</h7><br><h7>Eugene</h7></center></td> |
| + | </tr> |
| + | <tr> |
| + | <td><center><img src="https://static.igem.org/mediawiki/2013/d/d1/DougHeadshot2.png" width="120" height="180"></center></td> |
| + | <td><center><img src="https://static.igem.org/mediawiki/2013/1/1d/SwapnilHeadshot2.jpg" width="140" height="180"></center></td> |
| + | <td><center><img src="https://static.igem.org/mediawiki/2013/b/b2/ErnstHeadshot.png" width="170" height="180"></td> |
| + | </center></tr> |
| + | </table> |
| + | </center> |
| + | <h7> |
| + | <p><center>Janoo Fernandes and Alejandro Pelaez Lechuga</p> |
| | | |
- | .navbar li {color: #ffffff;}
| + | <p><center>And the rest of the CIDAR team for helping us throughout the summer!</p></center> |
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| + | <h6><center>Center of Synthetic Biology (CoSBi)</h6> |
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| + | <table> |
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| + | <td><center><h7>Professor James Collins</h7><br></center></td> |
- | font-size: 20pt;
| + | </tr> |
- | }
| + | <tr> |
| + | <td><center><img src="https://static.igem.org/mediawiki/2013/0/0b/JimCollins_v.jpg" width="135" height="190"></center></td> |
| + | </table> |
| + | </center> |
| + | <p><h7><center>We would like to also thank Professor Collins for his support and for access to lab equipment.</h7></p></center> |
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| + | <h5><center>CoSBi UROP Faculty Sponsors</h5></center> |
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| + | <td><center><h7>Professor Ahmad "Mo" Khalil</h7><br></center></td> |
- | color: #696969;
| + | <td><center><h7>Professor Wilson Wong</h7><br></center></td> |
- | font-size: 12pt;
| + | </tr> |
- | }
| + | <tr> |
| + | <td><center><img src="https://static.igem.org/mediawiki/2013/1/13/Mo-Khalil-Lab-Web.jpg" width="140" height="160"></center></td> |
| + | <td><center><img src="https://static.igem.org/mediawiki/2013/7/7f/Wilson-Wong.jpg" width="90" height="160"></center></td> |
| + | </center></tr> |
| + | </table> |
| + | </center> |
| + | <p><h7><center>We would like to thank Professor Khalil and Professor Wong for their Summer UROP Faculty Sponsorships.</h7></p></center> |
| + | <br> |
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- | <link rel="stylesheet" type="text/css" href="http://static.tumblr.com/bepcnvc/YKnm67emn/team.css"> | + | <h6><center>Corporate Collaborations - BBN Technologies</h6></center> |
- | <link href='http://fonts.googleapis.com/css?family=Signika' rel='stylesheet' type='text/css'> | + | <center> |
- | <link href='http://fonts.googleapis.com/css?family=Electrolize' rel='stylesheet' type='text/css'> | + | <table> |
| + | <tr> |
| + | <td><center><h7>Dr. Jacob Beal</h7><br></center></td> |
| + | </tr> |
| + | <tr> |
| + | <td><center><img src="https://static.igem.org/mediawiki/2013/1/1f/BU_JBeal.jpg" width="160" height="160"></center></td> |
| + | </table> |
| + | </center> |
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- | <style type="text/css">@import "http://cs.wellesley.edu/~hcilab/iGEM_wiki/css/videobox.css";</style>
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| | | |
- | </head> | + | <p><h7><center>We would like to thank Dr. Jacob Beal from BBN Technologies for teaching us how to use the BBN Synthetic Biology Tools and offering guidance for our characterization work.</h7></p></center> |
- | <body class="basiclayout"> | + | <br> |
- | <div id="bu-wellesley_wiki_content"> | + | |
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- | <p style="text-align:center;"><a href="https://2012.igem.org/Team:BostonU"><img src="https://static.igem.org/mediawiki/2012/e/ea/Rainbowsky.png" width="800px"></a></p> | + | <h6><center>University of Wisconsin Madison</h6></center> |
| + | <p><center><img src="https://static.igem.org/mediawiki/2013/5/53/Holden.png" width="300px"></a></center></p> |
| + | <p><h7><center>We would like to thank Dr. James Thoden and Dr. Hazel M. Holden from the <a href="http://www.biochem.wisc.edu/faculty/holden/lab/default.aspx">Holden Lab</a> at the University of Wisconsin-Madison for sending us genomic DNA for our <a href="https://2013.igem.org/Team:BostonU/QS">Quorum Sensing</a> project.</h7></p></center> |
| + | <br> |
| | | |
- | <ul id="nav">
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- | <li><a href="#">Our Team</a>
| |
- | <ul>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Team">Team</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Social">Summer Fun</a></li>
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- | </ul>
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- | </li>
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- | <li><a href="#">Project</a>
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- | <ul>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Project_Overview">Project Overview and Abstract</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/MoClo2">Introduction to MoClo</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Characterization">Introduction to Characterization</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/DataSheet">Introduction to Data Sheets</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Methodology ">Methodology Overview</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Results ">Results Summary</a></li>
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- | </ul>
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- | </li>
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- | <li><a href="#">Achievements</a>
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- | <ul>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Data">Data Collected</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Parts">Parts Submitted</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/MoClo">MoClo Kit</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Gold">Medal Fulfillment</a></li>
| |
| | | |
- | </ul>
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- | </li>
| |
| | | |
- | <li><a href="#">Notebook</a>
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- | <ul>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Protocols">Protocols</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Clotho">Clotho and Eugene</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Notebook">Weekly Notebook</a></li>
| |
- | </ul>
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- | </li>
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- |
| |
| | | |
- | <li><a href="#">Considerations</a>
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- | <ul>
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- | <li><a href="https://2012.igem.org/Team:BostonU/NEGEM">New England iGEM Regional Meeting</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Human Practices">Human Practices</a></li>
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- | <li><a href="https://2012.igem.org/Team:BostonU/Safety">Safety</a></li>
| |
| | | |
- | </ul>
| + | <p><h6>Contributions</h6></p> |
| + | <p><h7>The laboratory work was completed by Jake Awtry, Devina Desai, Shawn Jin, Thomas Lozanoski, and Pooja Shah. They utilized Clotho, Eugene, and Pigeon with initial instruction from the <a href="http://wiki.bu.edu/ece-cidar/index.php/Main_Page">CIDAR</a> lab. The team adviser, Dr. Traci Haddock, and mentor, Sonya Iverson, provided instruction in protocols and troubleshooting guidance throughout the project for the wet lab experiments.</h7></p> |
| | | |
- | <li><a href="#">Acknowledgements</a>
| + | <p><h7>Evan Appleton and Jenhan Tao helped Pooja and Devina write the code for the <a href="https://2013.igem.org/Team:BostonU/Human_Practices">Data Sheet App</a> and introduced them to some computer science principles, Java, and JavaScript. Dr. Ernst Oberortner taught the team how to use Eugene and met with them on a weekly basis to go over advancements and feedback about the Eugene program.</h7></p> |
- | <ul>
| + | |
- | <li><a href="https://2012.igem.org/Team:BostonU/Collaborations">Collaborations</a></li>
| + | |
- | <li><a href="https://2012.igem.org/Team:BostonU/Acknowledgements">Acknowledgements</a></li>
| + | |
| | | |
- | </ul>
| + | <p><h7>The website template is from our 2011 iGEM team's wiki page (<a href="https://2011.igem.org/Team:BU_Wellesley_Software">BU Wellesley Software</a>). Traci, Pooja, and Devina edited the CSS file and created the new pages for this year's wiki. It was a full team effort to fill in the various Wiki pages.</h7></p> |
- | </li>
| + | |
- |
| + | |
- | </ul> | + | |
| | | |
- | <br>
| + | <p><h6>Sponsors</h6></p> |
- | <h4>Acknowledgements</h4>
| + | <p><h7>We'd like to thank all of our sponsors for their generous support. Without the support from the following Boston University departments and corporate sponsors, we never would have been able to compete in iGEM.</h7></p> |
- | <br>
| + | <p><h7>Thank you very much!</h7></p> |
- | <ul>
| + | |
- | <h8><p dir="ltr">
| + | |
- | Densmore Laboratory: Cross-disciplinary Integration of Design Automation Research <a href="http://wiki.bu.edu/ece-cidar/index.php/Main_Page">(CIDAR)</a></h8>
| + | |
- | | + | |
- | <br><ul><h7>Professor Douglas Densmore (Faculty Sponsor)<br>
| + | |
- | <img src="http://wiki.bu.edu/wiki/ece-cidar/images/d/d1/DougHeadshot2.png" width="150"><br><br>
| + | |
- | Dr. Swapnil Bhatia and Dr. Ernst Oberortner<br>
| + | |
- | <img src="http://wiki.bu.edu/wiki/ece-cidar/images/1/1d/SwapnilHeadshot2.jpg" width="140">  
| + | |
- | <img src="http://wiki.bu.edu/wiki/ece-cidar/images/b/b2/ErnstHeadshot.png" width="170"><br><br>
| + | |
- | Jenhan Tao and Janoo Fernandes<br>And the rest of the CIDAR team for helping us throughout the summer!</h7>
| + | |
- | <br>
| + | |
- | </ul>
| + | |
- | </ul>
| + | |
- | | + | |
- | <ul>
| + | |
- | <h8><p dir="ltr">Voigt Lab at MIT</h8>
| + | |
- | <br>
| + | |
- | <ul><h7>Dr. Michael Smanski for supplying us with the plasmid we used to amplify <i>lacZ</i></h7>
| + | |
- | <br>
| + | |
- | </ul></ul>
| + | |
- | | + | |
- | <ul>
| + | |
- | <h8><p dir="ltr">Semrau Lab at University of Michigan</h8>
| + | |
- | <br>
| + | |
- | <ul><h7>Dr. Alexey Vorobev for supplying us with the <i>Methylosinus trichosporium</i> OB3b genomic DNA</h7>
| + | |
- | <br>
| + | |
- | </ul></ul>
| + | |
- | | + | |
- | <ul>
| + | |
- | <h8><p dir="ltr">Somerville High School</h8>
| + | |
- | <br>
| + | |
- | <ul><h7>Mr. Christopher Angelli for his assistance with our Human Practices project</h7>
| + | |
- | <br>
| + | |
- | </ul></ul>
| + | |
- | | + | |
- | <ul>
| + | |
- | <h8><p dir="ltr">Other iGEM Teams</h8>
| + | |
- | <ul>
| + | |
- | <h7>The Wellesley HCI iGEM Team for their collaboration this summer and participating in NEGEM
| + | |
- | <br>
| + | |
- | The MIT iGEM Team for organizing the Gingko Bioworks Tour and participating in NEGEM
| + | |
- | <br>
| + | |
- | The Brown students from the Stanford-Brown iGEM Team for participating in NEGEM</h7>
| + | |
- | <br><br>
| + | |
- | </ul>
| + | |
- | </ul>
| + | |
- | | + | |
- | <h4>Contributions</h4>
| + | |
- | <ul><br>
| + | |
- | <h7><p dir="ltr">All of the lab work shown in the team notebook was done by Shawn and Monique. They also used Clotho and Eugene themselves, with some initial instruction from Jenhan Tao and Ernst Oberortner from the <a href="http://wiki.bu.edu/ece-cidar/index.php/Members">CIDAR lab</a>.
| + | |
- | <br><br>The team mentors and adviser primarily offered instruction in protocols and troubleshooting guidance for the wet lab work conducted.
| + | |
- | <br><br>Sonya and Swati, two of the team mentors, taught Shawn and Monique the wet lab protocols and helped them troubleshoot problems with their methods (including PCR, cloning, and gel electrophoresis) throughout the summer. Sonya built the B0032 inverter.
| + | |
- | <br><br>Evan, the third team mentor, helped Monique run the characterization experiments. Specifically, he ran the flow cytometer with Monique as only graduate students and above are allowed to run the instrument independently. Monique set up the cultures and conducted the characterization experiments and analysis under Evan's guidance.
| + | |
- | <br><br>Traci, the team adviser, oversaw the team's work and experiments throughout the summer. Specifically, she taught Shawn and Monique how to design primers and run MoClo reactions. Traci also taught them some of the protocols they used in their research and helped them troubleshoot some of their PCR and cloning problems. Traci built the B0034 inverter.
| + | |
- | <br><br>The website template is from our 2011 iGEM team's wiki page (<a href="https://2011.igem.org/Team:BU_Wellesley_Software">BU Wellesley Software</a>). Traci edited the css file and created the new pages for this year's wiki. It was a full team effort to fill in the various Wiki pages.
| + | |
- | </h7>
| + | |
- | </p>
| + | |
- | </ul>
| + | |
- | <!--<br><br><br><br><br><br>-->
| + | |
- | <h4>Sponsors</h4>
| + | |
- | <p>
| + | |
- | <ul>
| + | |
- | <h7><p dir="ltr">We'd like to thank all of our sponsors for their generous support. Without the support from the following Boston University departments and various industrial companies, we never would have been able to compete in iGEM.
| + | |
- | <br> | + | |
- | <br> | + | |
- | Thank you very much! | + | |
- | </p></h7>
| + | |
- | </ul> | + | |
| <br> | | <br> |
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| <p><center> | | <p><center> |
| + | <img src="https://static.igem.org/mediawiki/2013/f/f9/Bu.gif" width="250px"><br><br> |
| + | <img src="https://static.igem.org/mediawiki/2013/8/83/Eng_ctsi.png" width="500px"><br><br> |
| + | <img src="https://static.igem.org/mediawiki/2013/1/1e/Urop.jpg" width="150px"> |
| + | <img src="https://static.igem.org/mediawiki/2013/8/82/Autodesk.jpg" width="300px"><br><br> |
| + | <img src="https://static.igem.org/mediawiki/2013/3/36/Epoch.jpg" width="175px"> |
| + | <img src="https://static.igem.org/mediawiki/2013/f/fc/TueSponsorsNEB.png" width="175px"> |
| + | <img src="https://static.igem.org/mediawiki/2013/thumb/8/8d/Tecan.gif/800px-Tecan.gif" width="200px"> |
| + | </center></p> |
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- | <img src = "http://imageshack.us/a/img841/3749/buctsi.png" width="250px">  
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- | <img src = "http://imageshack.us/a/img35/618/newenglandbiolabs.png" width="150px">  
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- | <img src = "http://imageshack.us/a/img43/3867/tecan.gif" width="150px">  
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- | <img src = "http://imageshack.us/a/img842/7492/urop.jpg" width="150px">  
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- | <img src = "http://imageshack.us/a/img832/6857/autodeskn.jpg" width="150px">  
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| </html> | | </html> |
Janoo Fernandes and Alejandro Pelaez Lechuga
And the rest of the CIDAR team for helping us throughout the summer!
Center of Synthetic Biology (CoSBi)
Professor James Collins
|
|
We would like to also thank Professor Collins for his support and for access to lab equipment.
CoSBi UROP Faculty Sponsors
Professor Ahmad "Mo" Khalil
|
Professor Wilson Wong
|
|
|
We would like to thank Professor Khalil and Professor Wong for their Summer UROP Faculty Sponsorships.
Corporate Collaborations - BBN Technologies
Dr. Jacob Beal
|
|
We would like to thank Dr. Jacob Beal from BBN Technologies for teaching us how to use the BBN Synthetic Biology Tools and offering guidance for our characterization work.
University of Wisconsin Madison
We would like to thank Dr. James Thoden and Dr. Hazel M. Holden from the Holden Lab at the University of Wisconsin-Madison for sending us genomic DNA for our Quorum Sensing project.
Contributions
The laboratory work was completed by Jake Awtry, Devina Desai, Shawn Jin, Thomas Lozanoski, and Pooja Shah. They utilized Clotho, Eugene, and Pigeon with initial instruction from the CIDAR lab. The team adviser, Dr. Traci Haddock, and mentor, Sonya Iverson, provided instruction in protocols and troubleshooting guidance throughout the project for the wet lab experiments.
Evan Appleton and Jenhan Tao helped Pooja and Devina write the code for the Data Sheet App and introduced them to some computer science principles, Java, and JavaScript. Dr. Ernst Oberortner taught the team how to use Eugene and met with them on a weekly basis to go over advancements and feedback about the Eugene program.
The website template is from our 2011 iGEM team's wiki page (BU Wellesley Software). Traci, Pooja, and Devina edited the CSS file and created the new pages for this year's wiki. It was a full team effort to fill in the various Wiki pages.
Sponsors
We'd like to thank all of our sponsors for their generous support. Without the support from the following Boston University departments and corporate sponsors, we never would have been able to compete in iGEM.
Thank you very much!