User:ChristopherW
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ChristopherW (Talk | contribs) (→Sample Output) |
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|colspan="2"|A (Ala) | |colspan="2"|A (Ala) | ||
- | + | |4 (7.02%) | |
|colspan="2"|R (Arg) | |colspan="2"|R (Arg) | ||
- | | | + | |2 (3.51%) |
|colspan="2"|N (Asn) | |colspan="2"|N (Asn) | ||
- | + | |3 (5.26%) | |
|colspan="2"|D (Asp) | |colspan="2"|D (Asp) | ||
- | | | + | |4 (7.02%) |
|colspan="2"|C (Cys) | |colspan="2"|C (Cys) | ||
- | | | + | |4 (7.02%) |
|- | |- | ||
- | |Q (Gln) | + | |colspan="2"|Q (Gln) |
- | |2 ( | + | |2 (3.51%) |
- | |E (Glu) | + | |colspan="2"|E (Glu) |
- | | | + | |2 (3.51%) |
- | |G (Gly) | + | |colspan="2"|G (Gly) |
- | | | + | |4 (7.02%) |
- | |H (His) | + | |colspan="2"|H (His) |
- | | | + | |3 (5.26%) |
- | |I (Ile) | + | |colspan="2"|I (Ile) |
- | | | + | |3 (5.26%) |
|- | |- | ||
- | |L (Leu) | + | |colspan="2"|L (Leu) |
- | |3 ( | + | |3 (5.26%) |
- | |K (Lys): | + | |colspan="2"|K (Lys): |
- | | | + | |3 (5.26%) |
- | |M (Met) | + | |colspan="2"|M (Met) |
- | | | + | |3 (5.26%) |
- | |F (Phe) | + | |colspan="2"|F (Phe) |
- | |1 ( | + | |1 (1.75%) |
- | |P (Pro) | + | |colspan="2"|P (Pro) |
- | |2 ( | + | |2 (3.51%) |
|- | |- | ||
- | |S (Ser) | + | |colspan="2"|S (Ser) |
- | | | + | |4 (7.02%) |
- | |T (Thr) | + | |colspan="2"|T (Thr) |
- | |1 ( | + | |1 (1.75%) |
- | |W (Trp) | + | |colspan="2"|W (Trp) |
- | | | + | |3 (5.26%) |
- | |Y (Tyr) | + | |colspan="2"|Y (Tyr) |
- | | | + | |3 (5.26%) |
- | |V (Val) | + | |colspan="2"|V (Val) |
- | | | + | |3 (5.26%) |
|- | |- | ||
|colspan="3"|'''Amino acid counting:''' | |colspan="3"|'''Amino acid counting:''' | ||
|colspan="3"|Total number of amino acids (aa): | |colspan="3"|Total number of amino acids (aa): | ||
- | |colspan="2"| | + | |colspan="2"|57 |
|colspan="3"|Number of positively charged aa (Arg + Lys): | |colspan="3"|Number of positively charged aa (Arg + Lys): | ||
- | |||
- | |||
|colspan="2"|5 | |colspan="2"|5 | ||
+ | |colspan="3"|Number of negatively charged aa (Asp + Glu): | ||
+ | |colspan="2"|6 | ||
|- | |- | ||
|colspan="3"|'''Biochemical parameters:''' | |colspan="3"|'''Biochemical parameters:''' | ||
|colspan="3"|Molecular weight [Da]: | |colspan="3"|Molecular weight [Da]: | ||
- | |colspan="2"| | + | |colspan="2"|6577.50 |
|colspan="3"|Theoretical pI: | |colspan="3"|Theoretical pI: | ||
- | |colspan="2"| | + | |colspan="2"|6.28 |
|colspan="3"|Extinction coefficient: | |colspan="3"|Extinction coefficient: | ||
|colspan="2"|?4? | |colspan="2"|?4? |
Revision as of 20:36, 16 July 2013
Enter a sequence below!
Enter sequence!
Sample Output
Automatically determined parameters using the [http://www.mediawiki.org/wiki/Table BioBrick-AutoAnnotator] | |||||||||||||||||||
BioBrick: BBa_K1159000 | Used open reading frame from position ?x? to ?y?. | ||||||||||||||||||
A (Ala) | 4 (7.02%) | R (Arg) | 2 (3.51%) | N (Asn) | 3 (5.26%) | D (Asp) | 4 (7.02%) | C (Cys) | 4 (7.02%) | ||||||||||
Q (Gln) | 2 (3.51%) | E (Glu) | 2 (3.51%) | G (Gly) | 4 (7.02%) | H (His) | 3 (5.26%) | I (Ile) | 3 (5.26%) | ||||||||||
L (Leu) | 3 (5.26%) | K (Lys): | 3 (5.26%) | M (Met) | 3 (5.26%) | F (Phe) | 1 (1.75%) | P (Pro) | 2 (3.51%) | ||||||||||
S (Ser) | 4 (7.02%) | T (Thr) | 1 (1.75%) | W (Trp) | 3 (5.26%) | Y (Tyr) | 3 (5.26%) | V (Val) | 3 (5.26%) | ||||||||||
Amino acid counting: | Total number of amino acids (aa): | 57 | Number of positively charged aa (Arg + Lys): | 5 | Number of negatively charged aa (Asp + Glu): | 6 | |||||||||||||
Biochemical parameters: | Molecular weight [Da]: | 6577.50 | Theoretical pI: | 6.28 | Extinction coefficient: | ?4? | |||||||||||||
Estimated half-life: | Mammals: | ?4 h? | Yeast: | ?4? | E. coli: | ?4? | |||||||||||||
Codon usage: | Mammals: | ?good? | Yeast: | ?Ok? | E. coli: | ?bad ? | |||||||||||||
RFC standard: | This is a RFC 25 BioBrick, thus ATGGCCGGC and ACCGGT were added to the 5' and 3' ends. | ||||||||||||||||||
The BioBrick-AutoAnnotator was created by TU-Munich 2013 iGEM team. For information please read the description. |