Template:Team:Bielefeld-Germany/Notebook/Week02

From 2013.igem.org

(Difference between revisions)
m
Line 80: Line 80:
                 - Using ''E. coli'' KRX Genome DNA for PCR <br />
                 - Using ''E. coli'' KRX Genome DNA for PCR <br />
                 - PCR-program: <br />
                 - PCR-program: <br />
-
<!--
 
-
{|cellspacing="0" border="1"
 
-
|'''Component'''
 
-
|'''Volume'''
 
-
|-
 
-
|H2O
 
-
|to 50 μL
 
-
|-
 
-
|5 x Phusion CC Buffer
 
-
|10 μL
 
-
|-
 
-
|10 mM dNTPs
 
-
|2 μL
 
-
|-
 
-
|Fwd and Rev Primer Mix 10 μM
 
-
|2,5 μL
 
-
|-
 
-
|Tempalte 100 ng
 
-
|1 μL
 
-
|-
 
-
|DMSO
 
-
|1,5 μL
 
-
|-
 
-
|Phusion DNA Polymerase
 
-
|0,5 μL
 
-
|} -->
 
-
 
-
 
                 Table PCR-program <br />
                 Table PCR-program <br />
                 - PCR products are used for agarose gel electrophoresis <br />
                 - PCR products are used for agarose gel electrophoresis <br />

Revision as of 11:30, 12 June 2013


Week 2, 13.05.2013, Monday

Posted on 10/06/2013

1) Experiment 1
We did it!

2) Experiment 2
Succeeded!

Week 2, 14.05.2013, Tuesday

Posted on 10/06/2013

1) Starting with experiment Glycerol dehydrogenase
- Preparing overnight culture ''E. coli'' KRX

2) Experiment 2 - Incubation
Description of experiment 2

Week 2, 15.05.2013, Wednesday

Posted on 10/06/2013

1) Glycerol dehydrogenase
- Using overnight culture ''E. coli'' KRX
- Genome Isolation ''E. coli'' KRX using innuPrep Plasmid MiniKit ''JenaAnalytik''
- Using ''E. coli'' KRX Genome DNA for PCR
- PCR-program:
Table PCR-program
- PCR products are used for agarose gel electrophoresis
Table gel-program
- Agarose gel electrophoresis failed, no bands found


2) Experiment 2

Week 1, 09.05.2013, Thursday

Posted on 10/06/2013

1) Glycerol dehydrogenase
- Using'' E. coli'' KRX Genome DNA for PCR
- PCR-program:
Table PCR-components
Table PCR-program
- PCR products are used for agarose gel electrophoresis
Table gel-program
- Agarose gel electrophoresis worked, see image.
Picture Agarosegel glda_1
- Bands are at expected size of 1050 bp


2) Experiment 2

Week 1, 10.05.2013, Friday

Posted on 10/06/2013

1) Glycerol dehydrogenase
- Repeating agarose gel electrophoresis form 23.05.2013 with more sample volume
- Isolation of bands at 1050 bp using innuPrep Gel Extraction Kit ''JenaAnalytik''
- Measurement of DNA-concentration using nanodrop