19/09/13
From 2013.igem.org
(Difference between revisions)
(→Nanodropping the samples for concentration) |
(→Nanodropping the samples for concentration) |
||
Line 22: | Line 22: | ||
|Sample nr||Volume ul||Concentration ng/ul||260/280||260/230 | |Sample nr||Volume ul||Concentration ng/ul||260/280||260/230 | ||
|- | |- | ||
- | |X3||11.3||1.87||1.29 | + | |X3||41||11.3||1.87||1.29 |
|- | |- | ||
- | |X5||12.2||1.78||1.22 | + | |X5||47||12.2||1.78||1.22 |
|- | |- | ||
- | |X6||12.9||1.79||1.22 | + | |X6||34||12.9||1.79||1.22 |
|- | |- | ||
- | |X7||8||1.71||0.96 | + | |X7||45||8||1.71||0.96 |
|- | |- | ||
- | |X8||10.5||1.88||1.2 | + | |X8||43||10.5||1.88||1.2 |
+ | |- | ||
+ | |X10||44||9||1.88||1.2 | ||
+ | |- | ||
+ | |X12||45||12.8||1.70||1.40 | ||
+ | |- | ||
+ | |F1||44.5||11.2||1.69||1.22 | ||
+ | |- | ||
+ | |F2||44||9.1||1.88||1.20 | ||
+ | |- | ||
+ | |F3||45.2||10.6||1.77||0.99 | ||
+ | |- | ||
+ | |F4||43.7||9.7||1.82||1.10 | ||
+ | |- | ||
+ | |F5||45.2||10.6||1.67||1.19 | ||
+ | |- | ||
+ | |F6||45.4||9.6||1.82||0.85 | ||
+ | |- | ||
+ | |F7||46||11||1.76||1.14 | ||
+ | |- | ||
+ | |F8||46||11.7||1.73||1.24 | ||
+ | |- | ||
+ | |F9||42.4||10.5||1.83||1.32 | ||
+ | |- | ||
+ | |F10||44.3||11||1.93||1.39 | ||
+ | |- | ||
+ | |F11||45.5||10.3||1.82||1.18 | ||
+ | |- | ||
+ | |F12||45.5||14.9||1.83||1.32 | ||
+ | |- | ||
+ | |B1||45||6.9||1.56||0.86 | ||
+ | |- | ||
+ | |B2||46||10.5||1.64||1.17 | ||
+ | |- | ||
+ | |B3||46||10||1.78||1.41 | ||
+ | |- | ||
+ | |B4||47||11.5||1.70||1.35 | ||
+ | |- | ||
+ | |B5||47||10.4||1.84||1.25 | ||
+ | |- | ||
+ | |B6||47||8.6||1.96||1.33 | ||
+ | |- | ||
+ | |B7||47||9.7||1.74||1.01 | ||
+ | |- | ||
+ | |B8||46||10.7||1.86|1.22 | ||
+ | |- | ||
+ | |B9||45||12.4||1.58||1.05 | ||
+ | |- | ||
+ | |B10||46||11.1||1.73||1.32 | ||
+ | |- | ||
+ | |B11||46||10.2||1.87||1.56 | ||
+ | |- | ||
+ | |B12||46||12.1||1.75||1.38 | ||
|} | |} | ||
Revision as of 10:48, 20 September 2013
Home | Team | Official Team Profile | Project | Parts Submitted to the Registry | Modeling | Notebook | Safety | Attributions |
---|
Contents |
DNA isolation from PCR products
- Isolating DNA using Omega nucleic acid purification kit and following its protocol.
- Isolated DNA from all of the samples B and F and samples X3, 5, 6, 7, 8, 10, 12.
- Selection was made by looking at gel pictures and selecting samples with visible bands.
Nanodropping the samples for concentration
Sample nr | Volume ul | Concentration ng/ul | 260/280 | 260/230 |
X3 | 41 | 11.3 | 1.87 | 1.29 |
X5 | 47 | 12.2 | 1.78 | 1.22 |
X6 | 34 | 12.9 | 1.79 | 1.22 |
X7 | 45 | 8 | 1.71 | 0.96 |
X8 | 43 | 10.5 | 1.88 | 1.2 |
X10 | 44 | 9 | 1.88 | 1.2 |
X12 | 45 | 12.8 | 1.70 | 1.40 |
F1 | 44.5 | 11.2 | 1.69 | 1.22 |
F2 | 44 | 9.1 | 1.88 | 1.20 |
F3 | 45.2 | 10.6 | 1.77 | 0.99 |
F4 | 43.7 | 9.7 | 1.82 | 1.10 |
F5 | 45.2 | 10.6 | 1.67 | 1.19 |
F6 | 45.4 | 9.6 | 1.82 | 0.85 |
F7 | 46 | 11 | 1.76 | 1.14 |
F8 | 46 | 11.7 | 1.73 | 1.24 |
F9 | 42.4 | 10.5 | 1.83 | 1.32 |
F10 | 44.3 | 11 | 1.93 | 1.39 |
F11 | 45.5 | 10.3 | 1.82 | 1.18 |
F12 | 45.5 | 14.9 | 1.83 | 1.32 |
B1 | 45 | 6.9 | 1.56 | 0.86 |
B2 | 46 | 10.5 | 1.64 | 1.17 |
B3 | 46 | 10 | 1.78 | 1.41 |
B4 | 47 | 11.5 | 1.70 | 1.35 |
B5 | 47 | 10.4 | 1.84 | 1.25 |
B6 | 47 | 8.6 | 1.96 | 1.33 |
B7 | 47 | 9.7 | 1.74 | 1.01 |
B8 | 46 | 10.7 | 1.22 | |
B9 | 45 | 12.4 | 1.58 | 1.05 |
B10 | 46 | 11.1 | 1.73 | 1.32 |
B11 | 46 | 10.2 | 1.87 | 1.56 |
B12 | 46 | 12.1 | 1.75 | 1.38 |
Sending isolated DNA to be sequenced by PNACL
- Sending 4 samples from each operon that showed highest DNA concentration: B5, 4, 9, 12; F8, 1, 10, 12; X3, 5, 6, 12.
Preparing overnight broths
- Preparing broths from individual colonie plates from previous day
- Selecting 4 colonies from each that showed highest DNA concentration from nanodrop: B5, 4, 9, 12; F8, 1, 10, 12; X3, 5, 6, 12.