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Team:Chiba/Project/uptake
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In most cases, it combines with <i>Fur</i> box (which is near the promoter) and regulates transcription.<br> | In most cases, it combines with <i>Fur</i> box (which is near the promoter) and regulates transcription.<br> | ||
<br> | <br> | ||
| - | When iron is rich, <i>Fur</i> becomes active and when <i>Fur</i> becomes active, it restricts the expression of iron transporter, and that means that the iron uptake would stop. At the same time,<i> Fur</i> restricts the expression of RyhB. RyhB is one of the sRNA that restricts the expression of Ferritin, so making <i>Fur</i> active leads ferritin to express.<br> | + | When iron is rich, <i>Fur</i> becomes active and when <i>Fur</i> becomes active, it restricts the expression of iron transporter, and that means that the iron uptake would stop. At the same time,<i> Fur</i> restricts the expression of <i>RyhB</i>. <i>RyhB</i> is one of the sRNA that restricts the expression of Ferritin, so making <i>Fur</i> active leads ferritin to express.<br> |
| - | Conversely, when iron is lacking, Fur becomes inactive, and the iron transporter would work normally, so iron would be taken in. RyhB would also work normally, so expression of ferritin is restricted and Ferritin wouldn't be expressed.<br> | + | Conversely, when iron is lacking, <i>Fur</i> becomes inactive, and the iron transporter would work normally, so iron would be taken in. <i>RyhB</i> would also work normally, so expression of ferritin is restricted and Ferritin wouldn't be expressed.<br> |
<br> | <br> | ||
| - | In short, if we knockdown/knockout <i>Fur</i>, iron transporter would be active so iron would be taken in, but the expression of Ferritin is stopped by RhyB.<br> | + | In short, if we knockdown/knockout <i>Fur</i>, iron transporter would be active so iron would be taken in, but the expression of Ferritin is stopped by <i>RhyB</i>.<br> |
<br> | <br> | ||
Also, there is a Regulator called <i>fieF</i> (ferric iron efflux). It makes iron and zinc flow out of cell and controls detoxification of cell. When <i>fieF</i> is knocked down/out, the tolerance of cell to iron would be lowered.<br> | Also, there is a Regulator called <i>fieF</i> (ferric iron efflux). It makes iron and zinc flow out of cell and controls detoxification of cell. When <i>fieF</i> is knocked down/out, the tolerance of cell to iron would be lowered.<br> | ||
<br> | <br> | ||
<i>Fec</i> has a character that can recognize ferric citrate and taking Fe(III) in. <i>Fec</i> is controlled by <i>Fur</i> and when the density of Fe(III) in the cell is too high, <i>Fur</i> restricts Fec and stops iron uptake.<br> | <i>Fec</i> has a character that can recognize ferric citrate and taking Fe(III) in. <i>Fec</i> is controlled by <i>Fur</i> and when the density of Fe(III) in the cell is too high, <i>Fur</i> restricts Fec and stops iron uptake.<br> | ||
| - | In the same way, EfeUOB has a character that can recognize ascorbic acid and taking Fe(II) in. <i>EfeUOB</i> is also controlled by <i>Fur</i> and when the density of Fe(II) in the cell is too high, <i>Fur</i> restricts EfeUOB and stops iron uptake.<br> | + | In the same way, <i>EfeUOB</i> has a character that can recognize ascorbic acid and taking Fe(II) in. <i>EfeUOB</i> is also controlled by <i>Fur</i> and when the density of Fe(II) in the cell is too high, <i>Fur</i> restricts <i>EfeUOB</i> and stops iron uptake.<br> |
<br> | <br> | ||
Using these characters, and by knocking down/out <i>Fur</i> and <i>fieF</i>, <i>Fec</i>/<i>EfeUOB</i> expression wouldn't be restricted so the amount of iron coming in would increase and the amount of iron going out would decrease. The system would work like when iron is lacking.<br> | Using these characters, and by knocking down/out <i>Fur</i> and <i>fieF</i>, <i>Fec</i>/<i>EfeUOB</i> expression wouldn't be restricted so the amount of iron coming in would increase and the amount of iron going out would decrease. The system would work like when iron is lacking.<br> | ||
Revision as of 01:38, 27 September 2013
Uptake
1.Introduction
Fur (Ferric uptake regulator) controls iron metabolism such as taking iron in or storing iron.
In most cases, it combines with Fur box (which is near the promoter) and regulates transcription.
When iron is rich, Fur becomes active and when Fur becomes active, it restricts the expression of iron transporter, and that means that the iron uptake would stop. At the same time, Fur restricts the expression of RyhB. RyhB is one of the sRNA that restricts the expression of Ferritin, so making Fur active leads ferritin to express.
Conversely, when iron is lacking, Fur becomes inactive, and the iron transporter would work normally, so iron would be taken in. RyhB would also work normally, so expression of ferritin is restricted and Ferritin wouldn't be expressed.
In short, if we knockdown/knockout Fur, iron transporter would be active so iron would be taken in, but the expression of Ferritin is stopped by RhyB.
Also, there is a Regulator called fieF (ferric iron efflux). It makes iron and zinc flow out of cell and controls detoxification of cell. When fieF is knocked down/out, the tolerance of cell to iron would be lowered.
Fec has a character that can recognize ferric citrate and taking Fe(III) in. Fec is controlled by Fur and when the density of Fe(III) in the cell is too high, Fur restricts Fec and stops iron uptake.
In the same way, EfeUOB has a character that can recognize ascorbic acid and taking Fe(II) in. EfeUOB is also controlled by Fur and when the density of Fe(II) in the cell is too high, Fur restricts EfeUOB and stops iron uptake.
Using these characters, and by knocking down/out Fur and fieF, Fec/EfeUOB expression wouldn't be restricted so the amount of iron coming in would increase and the amount of iron going out would decrease. The system would work like when iron is lacking.
As a result, the amount of iron inside E.coli would increase.
2.Materials&Methods
2.1.plasmid construct
プラスミドについて書く
Part link
2.2.Fur,fieFのノックダウン評価
3.Results & Discussion
3.1.plasmid建設の説明
3.2.Fur,fieFのノックダウン評価
4.Conclusion
それは・・
