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Team:UCLA/Modeling/Analysis
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== '''Analysis of Protein''' == | == '''Analysis of Protein''' == | ||
| + | |||
| + | ===Software=== | ||
<div> | <div> | ||
| - | + | Analysis of the protein was conducted using our own 'Protein Calculator' software alongside PyMOL. Instructions to download and use our program are as follows. (<b>Disclaimer!</b> There are still several bugs in the Protein Calculator program that are still in the process of being fixed. The dropbox download link below will be updated with newer versions as the fixes are made.) | |
| - | [[File:Walkthrough-1.png|thumb|left|Step 1.| | + | |
| + | |||
| + | First, click the link dropbox link below and download the files. | ||
| + | |||
| + | [[File:Walkthrough-1.png|thumb|left|Step 1.|800px]] | ||
| + | <br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br> | ||
| + | Then, blah blah blah blah. | ||
| - | [[File:Walkthrough-2.png|thumb|left|Step 2.| | + | [[File:Walkthrough-2.png|thumb|left|Step 2.|800px]] |
| + | <br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br> | ||
| + | Then, blah blah blah blah. | ||
| - | [[File:Walkthrough-3.png|thumb|left|Step 3.| | + | [[File:Walkthrough-3.png|thumb|left|Step 3.|800px]] |
| + | <br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br> | ||
| + | Then, blah blah blah blah. | ||
| - | [[File:Walkthrough-4.png|thumb|left|Step 4.| | + | [[File:Walkthrough-4.png|thumb|left|Step 4.|800px]] |
| + | <br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br> | ||
| + | Then, blah blah blah blah. | ||
| - | [[File:Walkthrough-5.png|thumb|left|Step 5.| | + | [[File:Walkthrough-5.png|thumb|left|Step 5.|800px]] |
| + | <br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br> | ||
| + | Then, blah blah blah blah. | ||
| - | [[File:Walkthrough-6.png|thumb|left|Step 6.| | + | [[File:Walkthrough-6.png|thumb|left|Step 6.|800px]] |
| + | <br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br> | ||
| + | Then, blah blah blah blah. | ||
| - | [[File:Walkthrough-7.png|thumb|left|Step 7.| | + | [[File:Walkthrough-7.png|thumb|left|Step 7.|800px]] |
| + | <br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br> | ||
| + | Then, blah blah blah blah. | ||
| - | [[File:Walkthrough-8.png|thumb|left|Step 8.| | + | [[File:Walkthrough-8.png|thumb|left|Step 8.|800px]] |
</div> | </div> | ||
Revision as of 13:12, 27 September 2013
Analysis of Protein
Software
Analysis of the protein was conducted using our own 'Protein Calculator' software alongside PyMOL. Instructions to download and use our program are as follows. (Disclaimer! There are still several bugs in the Protein Calculator program that are still in the process of being fixed. The dropbox download link below will be updated with newer versions as the fixes are made.)
First, click the link dropbox link below and download the files.
Then, blah blah blah blah.
Then, blah blah blah blah.
Then, blah blah blah blah.
Then, blah blah blah blah.
Then, blah blah blah blah.
Then, blah blah blah blah.
Then, blah blah blah blah.
https://www.dropbox.com/s/bai70ev5oqksj98/Protein%20Calculator.zip
REFERENCES
Overstreet, C M., et al. Self-made phage libraries with heterologous inserts in the Mtd of Bordetella bronchiseptica. Protein Eng. Des. Sel. 145 (2012)
