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Team:TU Darmstadt/safety
From 2013.igem.org
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| - | <h2>Why biosafety?</h2> | + | |
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One key issue for the implementation Synthetic Biology in everyday life is safety. Since genetically modified organisms (GMOs) can interact with natural organisms, evolve and adapt to their environment, completely new approaches are needed to address scientific and public safety concerns. Safety measures have to work independently of the operator’s skills or background knowledge. | One key issue for the implementation Synthetic Biology in everyday life is safety. Since genetically modified organisms (GMOs) can interact with natural organisms, evolve and adapt to their environment, completely new approaches are needed to address scientific and public safety concerns. Safety measures have to work independently of the operator’s skills or background knowledge. | ||
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| + | <h2><font size="6" color="#F0F8FF" face="Arial regular">A light-induced kill switch</font></h2> | ||
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Many different kill switches that are promoters that induced by the presence of an inducer signal like IPTG or heat. Since these kill switches can malfunction due to human failure we chose a different approach that fits perfectly to our device: A promoter that is induced by blue light. | Many different kill switches that are promoters that induced by the presence of an inducer signal like IPTG or heat. Since these kill switches can malfunction due to human failure we chose a different approach that fits perfectly to our device: A promoter that is induced by blue light. | ||
Ohlendorf et al. constructed the pDawn vector which contains the blue light sensitive histidine kinase YF1. In the presence of blue light YF1 doesn’t phosphorylate its cognate response regulator FixJ which then doesn’t drive gene expression from the FixK2 promoter. Downstream of the promoter lies the λ phage repressor cI which represses the strong λ phage promotor pR. Downstream of this promotor lies our toxin of choice, PezT, which was characterized by Mutschler et al. to be a very strong inhibitor of cell growth. | Ohlendorf et al. constructed the pDawn vector which contains the blue light sensitive histidine kinase YF1. In the presence of blue light YF1 doesn’t phosphorylate its cognate response regulator FixJ which then doesn’t drive gene expression from the FixK2 promoter. Downstream of the promoter lies the λ phage repressor cI which represses the strong λ phage promotor pR. Downstream of this promotor lies our toxin of choice, PezT, which was characterized by Mutschler et al. to be a very strong inhibitor of cell growth. | ||
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| + | <h2><font size="6" color="#F0F8FF" face="Arial regular">What happens after a spill?</font></h2> | ||
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In the absence of blue light (or day light respectively) the PezT toxin is not expressed and the bacteria are alive. After the FRET measurement or spilling the expression of PezT is induced by the inducing blue light or day light. Even if the spill remains unbeknownst to the operator the leaking bacteria contain themselves by committing suicide. Used capsules can be disposed without prior autoclaving. All these safety measures raise our device’s applicability and operability in everyday life so our device can be handled theoretically by untrained workers without an increase in risk. | In the absence of blue light (or day light respectively) the PezT toxin is not expressed and the bacteria are alive. After the FRET measurement or spilling the expression of PezT is induced by the inducing blue light or day light. Even if the spill remains unbeknownst to the operator the leaking bacteria contain themselves by committing suicide. Used capsules can be disposed without prior autoclaving. All these safety measures raise our device’s applicability and operability in everyday life so our device can be handled theoretically by untrained workers without an increase in risk. | ||
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Revision as of 13:21, 28 September 2013
Why biosafety?
One key issue for the implementation Synthetic Biology in everyday life is safety. Since genetically modified organisms (GMOs) can interact with natural organisms, evolve and adapt to their environment, completely new approaches are needed to address scientific and public safety concerns. Safety measures have to work independently of the operator’s skills or background knowledge.
A light-induced kill switch
Many different kill switches that are promoters that induced by the presence of an inducer signal like IPTG or heat. Since these kill switches can malfunction due to human failure we chose a different approach that fits perfectly to our device: A promoter that is induced by blue light. Ohlendorf et al. constructed the pDawn vector which contains the blue light sensitive histidine kinase YF1. In the presence of blue light YF1 doesn’t phosphorylate its cognate response regulator FixJ which then doesn’t drive gene expression from the FixK2 promoter. Downstream of the promoter lies the λ phage repressor cI which represses the strong λ phage promotor pR. Downstream of this promotor lies our toxin of choice, PezT, which was characterized by Mutschler et al. to be a very strong inhibitor of cell growth.
What happens after a spill?
In the absence of blue light (or day light respectively) the PezT toxin is not expressed and the bacteria are alive. After the FRET measurement or spilling the expression of PezT is induced by the inducing blue light or day light. Even if the spill remains unbeknownst to the operator the leaking bacteria contain themselves by committing suicide. Used capsules can be disposed without prior autoclaving. All these safety measures raise our device’s applicability and operability in everyday life so our device can be handled theoretically by untrained workers without an increase in risk.
