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AutoAnnotator by Team TU-Munich 2013

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Sample Output

Automatically determined parameters using the [http://www.mediawiki.org/wiki/Table BioBrick-AutoAnnotator]
BioBrick: BBa_K1159000 Used open reading frame from position ?x? to ?y?.
A (Ala) 3 (8.57%) R (Arg) 0 (0.00%) N (Asn) 0 (0.00%) D (Asp) 2 (5.71%) C (Cys) 1 (2.86%) Q (Gln) 2 (5.71%) E (Glu) 1 (2.86%) G (Gly) 1 (2.86%) H (His) 1 (2.86%)
K (Lys): 2 (5.71%) M (Met) 2 (5.71%) F (Phe) 2 (5.71%) P (Pro) 2 (5.71%) S (Ser) 3 (8.57%) T (Thr) 3 (8.57%) W (Trp) 2 (5.71%) Y (Tyr) 2 (5.71%) V (Val) 2 (5.71%)
Amino acid counting: Total number of amino acids (aa): 35 Number of positively charged aa (Arg + Lys): 2 Number of negatively charged aa (Asp + Glu): 3
Biochemical parameters: Molecular weight [Da]: 3613.05 Theoretical pI: 5.38 Extinction coefficient: ?4?
Estimated half-life: Mammals: ?4 h? Yeast: ?4? E. coli: ?4?
Codon usage: Mammals: ?good? Yeast: ?Ok? E. coli: ?bad ?
RFC standard: This is a RFC 25 BioBrick, thus ATGGCCGGC and ACCGGT were added to the 5' and 3' ends.
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