User:ChristopherW

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Revision as of 23:35, 27 July 2013 by ChristopherW (Talk | contribs)

AutoAnnotator by Team TU-Munich 2013

Enter a BioBrick number below, either starting with "BBa_" or just the alphanumeric code!
Alternatively (e.g. for new BioBricks, which aren't in the Registry yet) you can enter the nucleotide sequence directly.

Enter BioBrick number!


BioBrick: BBa_Automatically determined parameters using the BioBrick-AutoAnnotator version 1.0
RFC standard:RFC 10 BioBrickORF from 3 to 23 (excluding stop-codon)
Nucleotide sequence: (underlined part encodes the protein, italic parts were added)
 ATATGGGGTTA ... GTATACTCCTAGC
Amino acid sequence:
  1 MGLLVYS
Amino acid composition:
A (Ala)0 (0.0%)C (Cys)0 (0.0%)H (His)0 (0.0%)M (Met)1 (14.3%)T (Thr)0 (0.0%)
R (Arg)0 (0.0%)Q (Gln)0 (0.0%)I (Ile)0 (0.0%)F (Phe)0 (0.0%)W (Trp)0 (0.0%)
N (Asn)0 (0.0%)E (Glu)0 (0.0%)L (Leu)2 (28.6%)P (Pro)0 (0.0%)Y (Tyr)1 (14.3%)
D (Asp)0 (0.0%)G (Gly)1 (14.3%)K (Lys)0 (0.0%)S (Ser)1 (14.3%)V (Val)1 (14.3%)
Amino acid counting:Total number:7Positively charged (Arg + Lys):0 (0.0%)Negatively charged (Asp + Glu):0 (0.0%)
Biochemical parameters:Molecular mass [Da]:782.0Theoretical pI:5.27Extinction coefficient at 280 nm [M-1 cm-1]:1490 / 1490
(all Cys red./ox.)
Estimated half-life [h]:E. coli:>10S. cervisiae:>20Mammals:30
Codon usage (CAI):E. coli:acceptable (0.55)S. cervisiae:good (0.63)Mammals:acceptable (0.42)
The BioBrick-AutoAnnotator was created by TU-Munich 2013 iGEM team. For more information please read the description.

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