Team:UCSF/Home1

From 2013.igem.org

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<!--{{Team:HokkaidoU_Japan/Index/Slideshow}}-->
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// JavaScript Document
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/*! Copyright (c) 2009 Brandon Aaron (http://brandonaaron.net)
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* Dual licensed under the MIT (http://www.opensource.org/licenses/mit-license.php)
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* and GPL (http://www.opensource.org/licenses/gpl-license.php) licenses.
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* Thanks to: http://adomas.org/javascript-mouse-wheel/ for some pointers.
 +
* Thanks to: Mathias Bank(http://www.mathias-bank.de) for a scope bug fix.
 +
*
 +
* Version: 3.0.2
 +
*
 +
* Requires: 1.2.2+
 +
*/
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(function($) {
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var types = ['DOMMouseScroll', 'mousewheel'];
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$.event.special.mousewheel = {
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setup: function() {
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if ( this.addEventListener )
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for ( var i=types.length; i; )
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this.addEventListener( types[--i], handler, false );
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else
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this.onmousewheel = handler;
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},
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teardown: function() {
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if ( this.removeEventListener )
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for ( var i=types.length; i; )
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this.removeEventListener( types[--i], handler, false );
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else
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this.onmousewheel = null;
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}
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};
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$.fn.extend({
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mousewheel: function(fn) {
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return fn ? this.bind("mousewheel", fn) : this.trigger("mousewheel");
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},
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unmousewheel: function(fn) {
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return this.unbind("mousewheel", fn);
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}
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});
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function handler(event) {
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var args = [].slice.call( arguments, 1 ), delta = 0, returnValue = true;
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event = $.event.fix(event || window.event);
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event.type = "mousewheel";
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if ( event.wheelDelta ) delta = event.wheelDelta/120;
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if ( event.detail    ) delta = -event.detail/3;
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// Add events and delta to the front of the arguments
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args.unshift(event, delta);
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return $.event.handle.apply(this, args);
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}
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})(jQuery);
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 +
/**
 +
* @version $Id:  $Revision
 +
* @package jquery
 +
* @subpackage lofslidernews
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* @copyright Copyright (C) JAN 2010 LandOfCoder.com <@emai:landofcoder@gmail.com>. All rights reserved.
 +
* @website    http://landofcoder.com
 +
* @license This plugin is dual-licensed under the GNU General Public License and the MIT License
 +
*/
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// JavaScript Document
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(function($) {
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$.fn.lofJSidernews = function( settings ) {
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return this.each(function() {
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// get instance of the lofSiderNew.
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new  $.lofSidernews( this, settings );
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});
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}
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$.lofSidernews = function( obj, settings ){
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this.settings = {
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direction     : '',
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mainItemSelector    : 'li',
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navInnerSelector : 'ul',
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navSelector  : 'li' ,
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navigatorEvent : 'click',
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wapperSelector: '.lof-main-wapper',
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interval   : 4000,
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auto     : true, // whether to automatic play the slideshow
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maxItemDisplay : 3,
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startItem : 0,
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navPosition : 'vertical',
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navigatorHeight : 100,
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navigatorWidth : 310,
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duration : 600,
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navItemsSelector    : '.lof-navigator li',
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navOuterSelector    : '.lof-navigator-outer' ,
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isPreloaded : true,
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easing : 'easeInOutQuad'
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}
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$.extend( this.settings, settings ||{} );
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this.nextNo        = null;
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this.previousNo    = null;
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this.maxWidth  = this.settings.mainWidth || 600;
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this.wrapper = $( obj ).find( this.settings.wapperSelector );
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this.slides = this.wrapper.find( this.settings.mainItemSelector );
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if( !this.wrapper.length || !this.slides.length ) return ;
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// set width of wapper
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if( this.settings.maxItemDisplay > this.slides.length ){
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this.settings.maxItemDisplay = this.slides.length;
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}
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this.currentNo      = isNaN(this.settings.startItem)||this.settings.startItem > this.slides.length?0:this.settings.startItem;
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this.navigatorOuter = $( obj ).find( this.settings.navOuterSelector );
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this.navigatorItems = $( obj ).find( this.settings.navItemsSelector ) ;
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this.navigatorInner = this.navigatorOuter.find( this.settings.navInnerSelector );
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if( this.settings.navPosition == 'horizontal' ){
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this.navigatorInner.width( this.slides.length * this.settings.navigatorWidth );
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this.navigatorOuter.width( this.settings.maxItemDisplay * this.settings.navigatorWidth );
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this.navigatorOuter.height( this.settings.navigatorHeight );
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} else {
 +
this.navigatorInner.height( this.slides.length * this.settings.navigatorHeight );
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 +
this.navigatorOuter.height( this.settings.maxItemDisplay * this.settings.navigatorHeight );
 +
this.navigatorOuter.width( this.settings.navigatorWidth );
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}
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this.navigratorStep = this.__getPositionMode( this.settings.navPosition );
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this.directionMode = this.__getDirectionMode(); 
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 +
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if( this.settings.direction == 'opacity') {
 +
this.wrapper.addClass( 'lof-opacity' );
 +
$(this.slides).css('opacity',0).eq(this.currentNo).css('opacity',1);
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} else {
 +
this.wrapper.css({'left':'-'+this.currentNo*this.maxSize+'px', 'width':( this.maxWidth ) * this.slides.length } );
 +
}
 +
 
 +
 +
if( this.settings.isPreloaded ) {
 +
this.preLoadImage( this.onComplete );
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} else {
 +
this.onComplete();
 +
}
 +
 +
}
 +
    $.lofSidernews.fn =  $.lofSidernews.prototype;
 +
    $.lofSidernews.fn.extend =  $.lofSidernews.extend = $.extend;
 +
 +
$.lofSidernews.fn.extend({
 +
 
 +
startUp:function( obj, wrapper ) {
 +
seft = this;
 +
 
 +
this.navigatorItems.each( function(index, item ){
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$(item).click( function(){
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seft.jumping( index, true );
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seft.setNavActive( index, item );
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} );
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$(item).css( {'height': seft.settings.navigatorHeight, 'width':  seft.settings.navigatorWidth} );
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})
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this.registerWheelHandler( this.navigatorOuter, this );
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this.setNavActive(this.currentNo );
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if( this.settings.buttons && typeof (this.settings.buttons) == "object" ){
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this.registerButtonsControl( 'click', this.settings.buttons, this );
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}
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if( this.settings.auto )
 +
this.play( this.settings.interval,'next', true );
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 +
return this;
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},
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onComplete:function(){
 +
setTimeout( function(){ $('.preload').fadeOut( 900 ); }, 400 ); this.startUp( );
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},
 +
preLoadImage:function(  callback ){
 +
var self = this;
 +
var images = this.wrapper.find( 'img' );
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 +
var count = 0;
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images.each( function(index,image){
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if( !image.complete ){  
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image.onload =function(){
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count++;
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if( count >= images.length ){
 +
self.onComplete();
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}
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}
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image.onerror =function(){
 +
count++;
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if( count >= images.length ){
 +
self.onComplete();
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}
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}
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}else {
 +
count++;
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if( count >= images.length ){
 +
self.onComplete();
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}
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}
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} );
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},
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navivationAnimate:function( currentIndex ) {
 +
if (currentIndex <= this.settings.startItem
 +
|| currentIndex - this.settings.startItem >= this.settings.maxItemDisplay-1) {
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this.settings.startItem = currentIndex - this.settings.maxItemDisplay+2;
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if (this.settings.startItem < 0) this.settings.startItem = 0;
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if (this.settings.startItem >this.slides.length-this.settings.maxItemDisplay) {
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this.settings.startItem = this.slides.length-this.settings.maxItemDisplay;
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}
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}
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this.navigatorInner.stop().animate( eval('({'+this.navigratorStep[0]+':-'+this.settings.startItem*this.navigratorStep[1]+'})'),
 +
{duration:500, easing:'easeInOutQuad'} );
 +
},
 +
setNavActive:function( index, item ){
 +
if( (this.navigatorItems) ){
 +
this.navigatorItems.removeClass( 'active' );
 +
$(this.navigatorItems.get(index)).addClass( 'active' );
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this.navivationAnimate( this.currentNo );
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}
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},
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__getPositionMode:function( position ){
 +
if( position  == 'horizontal' ){
 +
return ['left', this.settings.navigatorWidth];
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}
 +
return ['top', this.settings.navigatorHeight];
 +
},
 +
__getDirectionMode:function(){
 +
switch( this.settings.direction ){
 +
case 'opacity': this.maxSize=0; return ['opacity','opacity'];
 +
default: this.maxSize=this.maxWidth; return ['left','width'];
 +
}
 +
},
 +
registerWheelHandler:function( element, obj ){
 +
element.bind('mousewheel', function(event, delta ) {
 +
var dir = delta > 0 ? 'Up' : 'Down',
 +
vel = Math.abs(delta);
 +
if( delta > 0 ){
 +
obj.previous( true );
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} else {
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obj.next( true );
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}
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return false;
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});
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},
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registerButtonsControl:function( eventHandler, objects, self ){
 +
for( var action in objects ){
 +
switch (action.toString() ){
 +
case 'next':
 +
objects[action].click( function() { self.next( true) } );
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break;
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case 'previous':
 +
objects[action].click( function() { self.previous( true) } );
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break;
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}
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}
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return this;
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},
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onProcessing:function( manual, start, end ){
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this.previousNo = this.currentNo + (this.currentNo>0 ? -1 : this.slides.length-1);
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this.nextNo = this.currentNo + (this.currentNo < this.slides.length-1 ? 1 : 1- this.slides.length);
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return this;
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},
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finishFx:function( manual ){
 +
if( manual ) this.stop();
 +
if( manual && this.settings.auto ){
 +
this.play( this.settings.interval,'next', true );
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}
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this.setNavActive( this.currentNo );
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},
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getObjectDirection:function( start, end ){
 +
return eval("({'"+this.directionMode[0]+"':-"+(this.currentNo*start)+"})");
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},
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fxStart:function( index, obj, currentObj ){
 +
if( this.settings.direction == 'opacity' ) {
 +
$(this.slides).stop().animate({opacity:0}, {duration: this.settings.duration, easing:this.settings.easing} );
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$(this.slides).eq(index).stop().animate( {opacity:1}, {duration: this.settings.duration, easing:this.settings.easing} );
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}else {
 +
this.wrapper.stop().animate( obj, {duration: this.settings.duration, easing:this.settings.easing} );
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}
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return this;
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},
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jumping:function( no, manual ){
 +
this.stop();
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if( this.currentNo == no ) return;
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var obj = eval("({'"+this.directionMode[0]+"':-"+(this.maxSize*no)+"})");
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this.onProcessing( null, manual, 0, this.maxSize )
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.fxStart( no, obj, this )
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.finishFx( manual );
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this.currentNo  = no;
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},
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next:function( manual , item){
 +
 
 +
this.currentNo += (this.currentNo < this.slides.length-1) ? 1 : (1 - this.slides.length);
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this.onProcessing( item, manual, 0, this.maxSize )
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.fxStart( this.currentNo, this.getObjectDirection(this.maxSize ), this )
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.finishFx( manual );
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},
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previous:function( manual, item ){
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this.currentNo += this.currentNo > 0 ? -1 : this.slides.length - 1;
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this.onProcessing( item, manual )
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.fxStart( this.currentNo, this.getObjectDirection(this.maxSize ), this )
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.finishFx( manual );
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},
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play:function( delay, direction, wait ){
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this.stop();
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if(!wait){ this[direction](false); }
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var self  = this;
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this.isRun = setTimeout(function() { self[direction](true); }, delay);
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},
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stop:function(){
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if (this.isRun == null) return;
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clearTimeout(this.isRun);
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            this.isRun = null;
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}
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})
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})(jQuery)
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</script>
<style type="text/css">
<style type="text/css">
@charset "utf-8";
@charset "utf-8";

Latest revision as of 09:45, 8 August 2013

</html>


  • HokkaidoU_Japan 2011

  • Welcome to the BIOxART Gallery!!

  • Be careful not to contaminate...

  • Meeting, meeting and MEETING!

  • Dr. E. coli get ready for the job

  • BIOxART, please feel free to look around

  • Experiment, experiment and EXPERIMENT!

Abstract

We further developed "Dr. E. coli": our project of iGEM 2010. Last year, we showed that Type 3 Secretion System (T3SS) works in E. coli by injecting GFP into RK13 cells. T3SS is a syringe like organelle found in bacterium such as Salmonella which uses it to inject virulence effector proteins into a target eukaryotic cell. We think this system can be applied to direct reprogramming of somatic cells among many other things.

We tested T3SS performance and tried to make it more convenient. For this purpose we designed a plasmid backbone which can instantly produce ready-to-inject fusion proteins from ordinary biobrick part. Using it, we tried to further characterize this system by injecting a library of protein domains.

In Science Gallery we exhibited awesome photographs related with biotechnology in public. We tried to catch the pedestrians’ interest in current synthetic biology and explore their thoughts.