Team:UNITN-Trento/Parts
From 2013.igem.org
(Difference between revisions)
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- | <td rowspan="2" class="grade"><img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> | + | <td rowspan="2" class="grade"><img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /></td> |
<td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065000">BBa_K1065000</a></td> | <td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065000">BBa_K1065000</a></td> | ||
<td class="name">EFE</td> | <td class="name">EFE</td> | ||
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<table> | <table> | ||
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- | <td rowspan="2" class="grade" | + | <td rowspan="2" class="grade"<img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /></td> |
<td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065002">BBa_K1065002</a></td> | <td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065002">BBa_K1065002</a></td> | ||
<td class="name">EFE with double-terminator</td> | <td class="name">EFE with double-terminator</td> | ||
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<table> | <table> | ||
<tr> | <tr> | ||
- | <td rowspan="2" class="grade"><img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> | + | <td rowspan="2" class="grade"><img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /></td> |
<td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065100">BBa_K1065100</a></td> | <td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065100">BBa_K1065100</a></td> | ||
<td class="name">BSMT1</td> | <td class="name">BSMT1</td> | ||
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<td colspan="2" class="descr"> | <td colspan="2" class="descr"> | ||
- | This part encodes | + | This part encodes BSMT1, an enzyme that methylates salycilic acid to obtain methyl salycilate. It is the original part from the '<i>Eau de coli</i>' MIT iGEM 2006 project, re-submitted (<i>and resurrected</i>) by us in pSB1C3. |
</td> | </td> | ||
</tr> | </tr> | ||
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<table> | <table> | ||
<tr> | <tr> | ||
- | <td rowspan="2" class="grade"><img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" />& | + | <td rowspan="2" class="grade"><img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" />&</td> |
<td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065103">BBa_K1065103</a></td> | <td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065103">BBa_K1065103</a></td> | ||
<td class="name">PchBA</td> | <td class="name">PchBA</td> | ||
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<td colspan="2" class="descr"> | <td colspan="2" class="descr"> | ||
- | PchA | + | PchA is the enzyme responsible for the formation of isochorismate from chorismate. The next step is performed by the PchB enzyme, which converts isochorismate in salicylic acid. |
</td> | </td> | ||
</tr> | </tr> | ||
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<table> | <table> | ||
<tr> | <tr> | ||
- | <td rowspan="2" class="grade"><img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> | + | <td rowspan="2" class="grade"><img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /></td> |
<td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065104">BBa_K1065104</a></td> | <td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065104">BBa_K1065104</a></td> | ||
<td class="name">SAM synthetase</td> | <td class="name">SAM synthetase</td> | ||
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<td colspan="2" class="descr"> | <td colspan="2" class="descr"> | ||
- | This part encodes the SAM (S-AdoMet) synthetase gene, | + | This part encodes the SAM (S-AdoMet) synthetase gene, which we friendly call "uncle SAM". SAM is a methyl donor required to produce MeSA and other methylated molecules. |
</td> | </td> | ||
</tr> | </tr> | ||
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</tr> | </tr> | ||
<tr> | <tr> | ||
- | <td colspan="2" class="descr"> | + | <td colspan="2" class="descr">inducible |
- | A methyltransferase (BSMT1) regulated by the araCpBAD | + | A methyltransferase (BSMT1) regulated by the araCpBAD promoter. |
</td> | </td> | ||
</tr> | </tr> | ||
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<td rowspan="2" class="grade"><img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> </td> | <td rowspan="2" class="grade"><img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> <img src="https://static.igem.org/mediawiki/2013/1/10/Tn-2013-parts-Banana-parts.png" /> </td> | ||
<td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065105">Bba_K1065105</a></td> | <td class="code"><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1065105">Bba_K1065105</a></td> | ||
- | <td class="name">SAM synthetase | + | <td class="name">SAM synthetase under pLac promoter</td> |
</tr> | </tr> | ||
<tr> | <tr> | ||
<td colspan="2" class="descr"> | <td colspan="2" class="descr"> | ||
- | This is | + | This is SAM synthetase (<i>uncle SAM</i>) regulated by the costitutive Lac promoter. |
</td> | </td> | ||
</tr> | </tr> | ||
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Revision as of 21:09, 20 September 2013
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BBa_K1065000 | EFE |
Ethylene Forming Enzyme gene (EFE) that forms ethylene starting from 2-oxoglutarate. |
BBa_K1065002 | EFE with double-terminator | |
EFE followed by the double terminator BBa_B0015. |
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BBa_K1065001 | EFE arabinose-regulated |
This is EFE followed by a double terminator (B0015) under the control of the araCpBAD inducible promoter. |
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BBa_K1065100 | BSMT1 |
This part encodes BSMT1, an enzyme that methylates salycilic acid to obtain methyl salycilate. It is the original part from the 'Eau de coli' MIT iGEM 2006 project, re-submitted (and resurrected) by us in pSB1C3. |
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BBa_K1065103 | PchBA |
PchA is the enzyme responsible for the formation of isochorismate from chorismate. The next step is performed by the PchB enzyme, which converts isochorismate in salicylic acid. |
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BBa_K1065104 | SAM synthetase |
This part encodes the SAM (S-AdoMet) synthetase gene, which we friendly call "uncle SAM". SAM is a methyl donor required to produce MeSA and other methylated molecules. |
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BBa_K1065101 | BSMT1 arabinose-regulated |
inducible A methyltransferase (BSMT1) regulated by the araCpBAD promoter. |
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Bba_K1065105 | SAM synthetase under pLac promoter |
This is SAM synthetase (uncle SAM) regulated by the costitutive Lac promoter. |
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BBa_K1065102 | PchBA IPTG-regulated and BSMT1 arabinose-regulated |
This is EFE followed by a double terminator (B0015) under the control of the araCpBAD inducible promoter. |
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BBa_K1065106 | BSMT1, PchBA and SAM synthetase |
An improved version of the wintergreen device with BMST1, PCHBA (BBa_K1065102) with added SAM synthetase enzymes to boost wintergreen production. |
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Bba_K1065301 | amilCP IPTG-regulated |
We attached pLac promoter to amilCP gene. This part does not work (sadly we saw no blue color). In fact, we started from BBa_K592009 which lacks the RBS (it is a coding part). No RBS, no party! |
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Bba_K1065300 | BBa_K952003 with Yf1 and FixJ IPTG-regulated. |
pLac+Yf1-FixJ-pFixK2-amil GFP without RBS and with pLac upstream. |
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BBa_K1065303 | Yf1+FixJ+pFixK2 |
The starting point to build a blue-light sensing circuit: the photosensor, the response regulator with its promoter. This part was build merging BBa_K592016 and BBa_K592006. |
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BBa_K1065310 | Yf1+FixJ+pFixK2+Inverter+pLambda+amilCP |
This is a complete blue-light sensing circuit, inverted with cI. Yf1 and FixJ are under the Anderson promoter (BBa_J23100). pLambda regulates the expression of the reporter gene amilCP. When exposed to blue-light, amilCP is synthesized, when the blue-light is not present, amilCP is not produced. |
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BBa_K1065302 | BBa_K1065300 improved |
The same as BBa_K1065300: we performed a mutagenesis to add the missing RBS, now this works!!! It is: pLac+Yf1+FixJ+pFixK2+amilGFP. |
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BBa_K1065305 | BBa_K952003 improved |
The same as BBa_K952003: we performed a mutagenesis to add the missing RBS, now this works!!! It is: Yf1+FixJ+pFixK2+amilGFP. |
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BBa_K1065306 | J23100+Yf1+FixJ |
Yf1 and FixJ under the Anderson promoter (BBa_J23100). |
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BBa_K1065204 | pXyl+EFE |
EFE in pXyl vector, specific for B. subtilis. |
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BBa_K1065309 | BBa_K1065302+BBa_K1065002 |
Complete blue-light sensing circuit without inverter, producing both amilGFP and EFE. |
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BBa_K1065201 | pXyl+GFP |
An improved version of the wintergreen device with BMST1, PCHBA (BBa_K1065102) with added SAM synthetase enzymes to boost wintergreen production. |
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BBa_K1065106 | BSMT1, PchBA and SAM synthetase |
A B. subtilis xylose inducible plasmid (from LMU Munich iGEM 2012) to produce GFPmut3b, regulated by a strong ribosome binding site (Bba_e0840). |
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BBa_K1065204 | pXyl+EFE |
EFE in pXyl vector, specific for B. subtilis. |
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BBa_K1065311 | Complete blue-light sensing device with inverter, amilCP and EFE |
Our complete circuit composed by:J23100, Yf1 and FixJ, pFixK2, CI, pLambda, amilCP and EFE. |
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