Team:Nanjing-China/pre

From 2013.igem.org

(Difference between revisions)

Revision as of 07:51, 24 September 2013

Pre-experiment: Through consulting literatures and materials, we found that the concentration of atrazine used in experiments related to its degradation were the most changeful. As we all know, atrazine, which is toxic to bacteria, can reduce the amount of bacteria, and influence the efficiency of degradation. To avoid this problem as well as to provide the public with a standard of atrazine concentration in experiments, we conducted a series of pre-experiments, studying the relationship between atrazine and bacteria.
Experiments and Results

The bacteria strain we used is called K-12, a strain isolated from Escherichia coli. It is a type strain which moves the fastest in soil of all strains with clear genetic background and handy genetic modification.

As Fig. 3-2-1 shows, when the concentration of atrazine was between 200μM and 500μM, the trend of the growth curve was similar to the nature growth curve without any atrazine. However, when bacteria exposed to atrazine of 1000μM, the growth curve of K-12 had changed a lot, especially in plateau period.

Growth Curve of K-12 cultured in different concentration of atrazine. Atrazine could not restrain bacteria growth significantly if the concentration was between 200μM and 500μM, but the growth curve changed a lot when the concentration of atrazine rose to 1000μM, suggesting that high concentration of atrazine is harmful to K-12.

In order to make their relationship more intuitive, we performed another experiment, comparing the amount of bacteria in plateau period. As illustrated in Fig. 3-2-2, the amount of bacteria cultured in atrazine of 200μM or 500μM hardly changed, while it declined sharply when cultured in concentration of 1000μM.

Fig.3-2-2 The amount of bacteria cultured for 10h in different concentration of atrazine. After 10h, plateau period had been reached. It was obvious that the maximum of bacteria exposed to atrazine of 200μM or 500μM hardly changed, but it became much lower when the concentration turned to 1000μM.

Taking the condition of bacteria's growth for consideration, we finally chose 200μM-500μM as the concentration of atrazine in our all experiments.

@@ Line 62: / Line 62: @@
              <dd class="dd_1">
 Through consulting literatures and materials, we found that the concentration of atrazine used in experiments related to its degradation were the most changeful. As we all know, atrazine, which is toxic to bacteria, can reduce the amount of bacteria, and influence the efficiency of degradation. To avoid this problem as well as to provide the public with a standard of atrazine concentration in experiments, we conducted a series of pre-experiments, studying the relationship between atrazine and bacteria.<br/>
-Experiments and Results<br/>
+Experiments and Results<br/><br/>
-The bacteria strain we used is called K-12, a strain isolated from Escherichia coli. It is a type strain which moves the fastest in soil of all strains with clear genetic background and handy genetic modification.<br/>
+The bacteria strain we used is called K-12, a strain isolated from Escherichia coli. It is a type strain which moves the fastest in soil of all strains with clear genetic background and handy genetic modification.<br/><br/>
 As Fig. 3-2-1 shows, when the concentration of atrazine was between 200μM and 500μM, the trend of the growth curve was similar to the nature growth curve without any atrazine. However, when bacteria exposed to atrazine of 1000μM, the growth curve of K-12 had changed a lot, especially in plateau period.<br/><br>
 <img src="https://static.igem.org/mediawiki/2013/8/89/Fig_3-2-1.png" align="middle"><br><br>
-Growth Curve of K-12 cultured in different concentration of atrazine. Atrazine could not restrain bacteria growth significantly if the concentration was between 200μM and 500μM, but the growth curve changed a lot when the concentration of atrazine rose to 1000μM, suggesting that high concentration of atrazine is harmful to K-12.<br/>
+Growth Curve of K-12 cultured in different concentration of atrazine. Atrazine could not restrain bacteria growth significantly if the concentration was between 200μM and 500μM, but the growth curve changed a lot when the concentration of atrazine rose to 1000μM, suggesting that high concentration of atrazine is harmful to K-12.<br/><br/>
-In order to make their relationship more intuitive, we performed another experiment, comparing the amount of bacteria in plateau period. As illustrated in Fig. 3-2-2, the amount of bacteria cultured in atrazine of 200μM or 500μM hardly changed, while it declined sharply when cultured in concentration of 1000μM.<br/>
+In order to make their relationship more intuitive, we performed another experiment, comparing the amount of bacteria in plateau period. As illustrated in Fig. 3-2-2, the amount of bacteria cultured in atrazine of 200μM or 500μM hardly changed, while it declined sharply when cultured in concentration of 1000μM.<br/><br/>
 Fig.3-2-2 The amount of bacteria cultured for 10h in different concentration of atrazine. After 10h, plateau period had been reached. It was obvious that the maximum of bacteria exposed to atrazine of 200μM or 500μM hardly changed, but it became much lower when the concentration turned to 1000μM.<br/>
 <img src="https://static.igem.org/mediawiki/2013/c/c0/Fig_3-2-2.jpg"><br><br>