User:ChristopherW

From 2013.igem.org

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=Test=
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|colspan="20"|'''Automatically determined parameters using the [http://www.mediawiki.org/wiki/Table BioBrick-AutoAnnotator]'''
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|-
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|colspan="10"|BioBrick: BBa_K1159000
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|colspan="10"|Used open reading frame from position ?x? to ?y?.
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|-
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|A (Ala)
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|10 (4.00%)
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|R (Arg)
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|8 (3.20%)
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|N (Asn)
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|13 (5.20%)
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|D (Asp)
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|18 (7.20%)
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|C (Cys)
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|2 (0.80%)
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|Q (Gln)
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|8 (3.20%)
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|E (Glu)
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|16 (6.40%)
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|G (Gly)
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|25 (10.00%)
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|H (His)
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|10 (4.00%)
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|-
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|K (Lys):
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|20 (8.00%)
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|M (Met)
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|6 (2.40%)
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|F (Phe)
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|13 (5.20%)
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|P (Pro)
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|11 (4.40%)
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|S (Ser)
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|9 (3.60%)
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|T (Thr)
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|16 (6.40%)
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|W (Trp)
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|1 (0.40%)
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|Y (Tyr)
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|12 (4.80%)
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|V (Val)
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|17 (6.80%)
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|-
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|colspan="3"|'''Amino acid counting:'''
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|colspan="3"|Total number of amino acids (aa):
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|colspan="2"|250
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|colspan="3"|Number of positively charged aa:
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|colspan="2"|?9?
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|colspan="3"|Number of negatively charged aa:
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|colspan="2"|?9?
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|-
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|colspan="3"|'''Biochemical parameters:'''
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|colspan="3"|Molecular weight [Da]:
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|colspan="2"|24190.279999999995
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|colspan="3"|Theoretical pI:
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|colspan="2"|?4?
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|colspan="3"|Extinction coefficient:
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|colspan="2"|?4?
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|-
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|colspan="3"|'''Estimated half-life:'''
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|colspan="3"|Mammals:
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|colspan="2"|?4 h?
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|colspan="3"|Yeast:
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|colspan="2"|?4?
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|colspan="3"|''E. coli'':
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|colspan="2"|?4?
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|-
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|colspan="3"|'''Codon usage:'''
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|colspan="3"|Mammals:
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|colspan="2"|?good?
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|colspan="3"|Yeast:
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|colspan="2"|?Ok?
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|colspan="3"|''E. coli'':
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|colspan="2"|?bad ?
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|-
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|colspan="3"|'''RFC standard:'''
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|colspan="17"|This is a RFC 25 BioBrick, thus ATGGCCGGC and ACCGGT were added to the 5' and 3' ends.
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|-
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|colspan="20"| The BioBrick-AutoAnnotator was created by [https://2013.igem.org/Team:TU-Munich TU-Munich 2013] iGEM team. For information please read the [https://2013.igem.org/Team:TU-Munich/Results/Software description].
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|}

Revision as of 22:25, 14 July 2013

AutoAnnotator by Team TU-Munich 2013

Enter a sequence below!

Enter sequence!

Counting Array will appear here!

Test

Automatically determined parameters using the [http://www.mediawiki.org/wiki/Table BioBrick-AutoAnnotator]
BioBrick: BBa_K1159000 Used open reading frame from position ?x? to ?y?.
A (Ala) 10 (4.00%) R (Arg) 8 (3.20%) N (Asn) 13 (5.20%) D (Asp) 18 (7.20%) C (Cys) 2 (0.80%) Q (Gln) 8 (3.20%) E (Glu) 16 (6.40%) G (Gly) 25 (10.00%) H (His) 10 (4.00%)
K (Lys): 20 (8.00%) M (Met) 6 (2.40%) F (Phe) 13 (5.20%) P (Pro) 11 (4.40%) S (Ser) 9 (3.60%) T (Thr) 16 (6.40%) W (Trp) 1 (0.40%) Y (Tyr) 12 (4.80%) V (Val) 17 (6.80%)
Amino acid counting: Total number of amino acids (aa): 250 Number of positively charged aa: ?9? Number of negatively charged aa: ?9?
Biochemical parameters: Molecular weight [Da]: 24190.279999999995 Theoretical pI: ?4? Extinction coefficient: ?4?
Estimated half-life: Mammals: ?4 h? Yeast: ?4? E. coli: ?4?
Codon usage: Mammals: ?good? Yeast: ?Ok? E. coli: ?bad ?
RFC standard: This is a RFC 25 BioBrick, thus ATGGCCGGC and ACCGGT were added to the 5' and 3' ends.
The BioBrick-AutoAnnotator was created by TU-Munich 2013 iGEM team. For information please read the description.
Retrieved from "http://2013.igem.org/User:ChristopherW"