Team:Paris Bettencourt/Project/Target/FBA

From 2013.igem.org

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     <img src="https://static.igem.org/mediawiki/2013/c/c7/PB_targettitle.png" style="margin-bottom:15px"/>
     <img src="https://static.igem.org/mediawiki/2013/c/c7/PB_targettitle.png" style="margin-bottom:15px"/>
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    <h2><i>E coli</i> essential genes</h2>
 +
    <a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=cysZ,purD,gmk,tyrA,dapE,sbp,leuD,hisH,trpE,ilvM,murE,rpiA,leuB,trpC,thrA,cysU,murF,tyrB,accB,argB,pyrE,lysA,metL,metC,hisC,glmU,guaB,hisG,ydiB,cynT,metE,hisI,fabB,accD,lysC,dapD,thyA,purL,cysH,folA,yqaB,purB,cysP,mraY,murI,ilvE,ilvG_2,cysM,ilvC,fabZ,serC,metH,purH,aroH,aroL,argI,dapA,serB,metB,cysE,aroD,hisB,dapF,aroF,trxB,pheA,ddlB,fabG,purA,murB,aroB,accC,pyrF,murA,dapB,metK,puuA,ilvI,trpD,fabD,ilvH,ilvB,murG,purF,ndk,murD,aroK,pyrB,cysA,argD,ilvN,fabF,ilvG_1,purM,prs,cysW,argC,pyrI,rpiB,accA,cysC,hisD,argF,ilvD,fabA,aroG,malY,glmS,murC,leuA,purC,glnA,can,cysK,fabI,serA,hisF,ppa,guaA,pgm,ddlA,leuC,aroC,pyrC,aroE,asd,aspC,hisA,aroA" target="_blank"><img src="https://static.igem.org/mediawiki/2013/2/21/PB_EcoCyc_Essential.png" width="100%" /></a> 
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 +
    <h2>List of predicted complementary knockouts</h2>
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    <center>
     <table id="fbatable" class="tftable" border="1">
     <table id="fbatable" class="tftable" border="1">
       <tr>
       <tr>
-
<th><i>M Tuberculosis<i> essential genes</th>
+
<th><i>M Tuberculosis</i> essential gene(s)</th>
-
<th>Genes in BioCyc</th>
+
<th>BioCyc Link</th>
-
<th><i>E coli</i> knockouts</th>
+
<th><i>E coli</i> knockout(s)</th>
-
<th>Genes in BioCyc</th>
+
<th>BioCyc Link</th>
 +
        <th>Cellular Process</th>
 +
      </tr>
 +
      <tr>
 +
        <td>accD3 accD5 Rv3281 </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=accD3,accD5,Rv3281" target="_blank">browse</a></td>
 +
        <td>accA accD accB accC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=accA,accD,accB,accC" target="_blank">browse</a></td>
 +
        <td>fatty acid biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>argB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=argB" target="_blank">browse</a></td>
 +
        <td>argB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=argB" target="_blank">browse</a></td>
 +
        <td>arginine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ilvG ilvN ilvB ilvB2 ilvX </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ilvG,ilvN,ilvB,ilvB2,ilvX" target="_blank">browse</a></td>
 +
        <td>ilvI ilvH ilvN ilvB ilvG_1 ilvG_2 ilvM </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ilvI,ilvH,ilvN,ilvB,ilvG_1,ilvG_2,ilvM" target="_blank">browse</a></td>
 +
        <td>valine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>argD </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=argD" target="_blank">browse</a></td>
 +
        <td>argD </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=argD" target="_blank">browse</a></td>
 +
        <td>arginine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>cysD cysN </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=cysD,cysN" target="_blank">browse</a></td>
 +
        <td>cysC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=cysC" target="_blank">browse</a></td>
 +
        <td>phosphorylation</td>
 +
      </tr>
 +
      <tr>
 +
        <td>purB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=purB" target="_blank">browse</a></td>
 +
        <td>purB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=purB" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>purB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=purB" target="_blank">browse</a></td>
 +
        <td>purB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=purB" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>purA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=purA" target="_blank">browse</a></td>
 +
        <td>purA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=purA" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>argC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=argC" target="_blank">browse</a></td>
 +
        <td>argC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=argC" target="_blank">browse</a></td>
 +
        <td>arginine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ddlA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ddlA" target="_blank">browse</a></td>
 +
        <td>ddlB ddlA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ddlB,ddlA" target="_blank">browse</a></td>
 +
        <td>peptidoglycan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>trpD </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=trpD" target="_blank">browse</a></td>
 +
        <td>trpD </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=trpD" target="_blank">browse</a></td>
 +
        <td>tryptophan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>trpE Rv2859c </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=trpE,Rv2859c" target="_blank">browse</a></td>
 +
        <td>trpD trpE </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=trpD,trpE" target="_blank">browse</a></td>
 +
        <td>tryptophan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>asd </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=asd" target="_blank">browse</a></td>
 +
        <td>asd </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=asd" target="_blank">browse</a></td>
 +
        <td>homoserine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>pyrB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=pyrB" target="_blank">browse</a></td>
 +
        <td>pyrI pyrB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=pyrI,pyrB" target="_blank">browse</a></td>
 +
        <td>pyrimidine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ask </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ask" target="_blank">browse</a></td>
 +
        <td>thrA metL lysC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=thrA,metL,lysC" target="_blank">browse</a></td>
 +
        <td>homoserine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>aspC aspB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=aspC,aspB" target="_blank">browse</a></td>
 +
        <td>aspC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=aspC" target="_blank">browse</a></td>
 +
        <td>L-phenylalanine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>hisG </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=hisG" target="_blank">browse</a></td>
 +
        <td>hisG </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=hisG" target="_blank">browse</a></td>
 +
        <td>histidine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>fabG2 inhA fas pks15 </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=fabG2,inhA,fas,pks15" target="_blank">browse</a></td>
 +
        <td>fabZ fabA fabG fabF fabI fabB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=fabZ,fabA,fabG,fabF,fabI,fabB" target="_blank">browse</a></td>
 +
        <td>fatty acid biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>Rv1885c </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=Rv1885c" target="_blank">browse</a></td>
 +
        <td>pheA tyrA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=pheA,tyrA" target="_blank">browse</a></td>
 +
        <td>L-phenylalanine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>aroF </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=aroF" target="_blank">browse</a></td>
 +
        <td>aroC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=aroC" target="_blank">browse</a></td>
 +
        <td>chorismate biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>cysM3 cysM cysK </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=cysM3,cysM,cysK" target="_blank">browse</a></td>
 +
        <td>cysK cysM </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=cysK,cysM" target="_blank">browse</a></td>
 +
        <td>cysteine biosynthesis </td>
 +
      </tr>
 +
      <tr>
 +
        <td>metC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=metC" target="_blank">browse</a></td>
 +
        <td>malY metC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=malY,metC" target="_blank">browse</a></td>
 +
        <td>transcription, DNA-dependent</td>
 +
      </tr>
 +
      <tr>
 +
        <td>lysA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=lysA" target="_blank">browse</a></td>
 +
        <td>lysA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=lysA" target="_blank">browse</a></td>
 +
        <td>cellular amino acid biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>dapF </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=dapF" target="_blank">browse</a></td>
 +
        <td>dapF </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=dapF" target="_blank">browse</a></td>
 +
        <td>cellular amino acid biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>aroG </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=aroG" target="_blank">browse</a></td>
 +
        <td>aroG aroH aroF </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=aroG,aroH,aroF" target="_blank">browse</a></td>
 +
        <td>L-phenylalanine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ilvD </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ilvD" target="_blank">browse</a></td>
 +
        <td>ilvD </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ilvD" target="_blank">browse</a></td>
 +
        <td>valine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>dapB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=dapB" target="_blank">browse</a></td>
 +
        <td>dapB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=dapB" target="_blank">browse</a></td>
 +
        <td>diaminopimelate biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>dapA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=dapA" target="_blank">browse</a></td>
 +
        <td>dapA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=dapA" target="_blank">browse</a></td>
 +
        <td>diaminopimelate biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>dfrA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=dfrA" target="_blank">browse</a></td>
 +
        <td>folA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=folA" target="_blank">browse</a></td>
 +
        <td>10-formyltetrahydrofolate biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>pyrC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=pyrC" target="_blank">browse</a></td>
 +
        <td>pyrC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=pyrC" target="_blank">browse</a></td>
 +
        <td>pyrimidine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>aroD </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=aroD" target="_blank">browse</a></td>
 +
        <td>aroD </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=aroD" target="_blank">browse</a></td>
 +
        <td>chorismate biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>aroB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=aroB" target="_blank">browse</a></td>
 +
        <td>aroB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=aroB" target="_blank">browse</a></td>
 +
        <td>chorismate biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>glmU </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=glmU" target="_blank">browse</a></td>
 +
        <td>glmU </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=glmU" target="_blank">browse</a></td>
 +
        <td>UDP-N-acetylglucosamine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>glmS </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=glmS" target="_blank">browse</a></td>
 +
        <td>glmS </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=glmS" target="_blank">browse</a></td>
 +
        <td>UDP-N-acetylglucosamine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>gmk </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=gmk" target="_blank">browse</a></td>
 +
        <td>gmk </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=gmk" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>glnA3 glnA glnA1 glnA2 glnA4 </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=glnA3,glnA,glnA1,glnA2,glnA4" target="_blank">browse</a></td>
 +
        <td>puuA glnA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=puuA,glnA" target="_blank">browse</a></td>
 +
        <td>putrescine catabolism</td>
 +
      </tr>
 +
      <tr>
 +
        <td>purF hisH </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=purF,hisH" target="_blank">browse</a></td>
 +
        <td>purF </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=purF" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>murI </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=murI" target="_blank">browse</a></td>
 +
        <td>murI </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=murI" target="_blank">browse</a></td>
 +
        <td>peptidoglycan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>guaA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=guaA" target="_blank">browse</a></td>
 +
        <td>guaA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=guaA" target="_blank">browse</a></td>
 +
        <td>GMP biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>Rv3273 Rv3588c </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=Rv3273,Rv3588c" target="_blank">browse</a></td>
 +
        <td>|can| cynT </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=|can|,cynT" target="_blank">browse</a></td>
 +
        <td>cyanate catabolism</td>
 +
      </tr>
 +
      <tr>
 +
        <td>hisD </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=hisD" target="_blank">browse</a></td>
 +
        <td>hisD </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=hisD" target="_blank">browse</a></td>
 +
        <td>histidine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>hisC cobC hisC2 </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=hisC,cobC,hisC2" target="_blank">browse</a></td>
 +
        <td>hisC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=hisC" target="_blank">browse</a></td>
 +
        <td>histidine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>hisF </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=hisF" target="_blank">browse</a></td>
 +
        <td>hisH hisF </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=hisH,hisF" target="_blank">browse</a></td>
 +
        <td>histidine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>hisB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=hisB" target="_blank">browse</a></td>
 +
        <td>hisB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=hisB" target="_blank">browse</a></td>
 +
        <td>histidine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>trpC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=trpC" target="_blank">browse</a></td>
 +
        <td>trpC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=trpC" target="_blank">browse</a></td>
 +
        <td>tryptophan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ilvE </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ilvE" target="_blank">browse</a></td>
 +
        <td>ilvE </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ilvE" target="_blank">browse</a></td>
 +
        <td>valine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>purH </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=purH" target="_blank">browse</a></td>
 +
        <td>purH </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=purH" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>guaB1 guaB3 guaB2 </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=guaB1,guaB3,guaB2" target="_blank">browse</a></td>
 +
        <td>guaB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=guaB" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>leuB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=leuB" target="_blank">browse</a></td>
 +
        <td>leuB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=leuB" target="_blank">browse</a></td>
 +
        <td>leucine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>leuD leuC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=leuD,leuC" target="_blank">browse</a></td>
 +
        <td>leuD leuC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=leuD,leuC" target="_blank">browse</a></td>
 +
        <td>leucine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>leuD leuC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=leuD,leuC" target="_blank">browse</a></td>
 +
        <td>leuD leuC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=leuD,leuC" target="_blank">browse</a></td>
 +
        <td>leucine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>leuA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=leuA" target="_blank">browse</a></td>
 +
        <td>leuA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=leuA" target="_blank">browse</a></td>
 +
        <td>leucine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ilvC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ilvC" target="_blank">browse</a></td>
 +
        <td>ilvC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ilvC" target="_blank">browse</a></td>
 +
        <td>valine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ilvC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ilvC" target="_blank">browse</a></td>
 +
        <td>ilvC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ilvC" target="_blank">browse</a></td>
 +
        <td>valine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ilvE </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ilvE" target="_blank">browse</a></td>
 +
        <td>ilvE tyrB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ilvE,tyrB" target="_blank">browse</a></td>
 +
        <td>valine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>fadD37 fabD </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=fadD37,fabD" target="_blank">browse</a></td>
 +
        <td>fabD </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=fabD" target="_blank">browse</a></td>
 +
        <td>fatty acid biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>metK </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=metK" target="_blank">browse</a></td>
 +
        <td>metK </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=metK" target="_blank">browse</a></td>
 +
        <td>S-adenosylmethionine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>metH </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=metH" target="_blank">browse</a></td>
 +
        <td>metE metH </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=metE,metH" target="_blank">browse</a></td>
 +
        <td>methionine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ndkA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ndkA" target="_blank">browse</a></td>
 +
        <td>ndk </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ndk" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ndkA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ndkA" target="_blank">browse</a></td>
 +
        <td>ndk </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ndk" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>argF </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=argF" target="_blank">browse</a></td>
 +
        <td>argF argI </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=argF,argI" target="_blank">browse</a></td>
 +
        <td>arginine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>pyrF </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=pyrF" target="_blank">browse</a></td>
 +
        <td>pyrF </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=pyrF" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>umpA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=umpA" target="_blank">browse</a></td>
 +
        <td>pyrE </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=pyrE" target="_blank">browse</a></td>
 +
        <td>pyrimidine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>murX </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=murX" target="_blank">browse</a></td>
 +
        <td>mraY </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=mraY" target="_blank">browse</a></td>
 +
        <td>peptidoglycan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>cysH </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=cysH" target="_blank">browse</a></td>
 +
        <td>cysH </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=cysH" target="_blank">browse</a></td>
 +
        <td>sulfur compound metabolism</td>
 +
      </tr>
 +
      <tr>
 +
        <td>Rv0728c serA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=Rv0728c,serA" target="_blank">browse</a></td>
 +
        <td>serA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=serA" target="_blank">browse</a></td>
 +
        <td>L-serine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>pgmA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=pgmA" target="_blank">browse</a></td>
 +
        <td>pgm yqaB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=pgm,yqaB" target="_blank">browse</a></td>
 +
        <td>glucose metabolism</td>
 +
      </tr>
 +
      <tr>
 +
        <td>ppa </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=ppa" target="_blank">browse</a></td>
 +
        <td>ppa </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ppa" target="_blank">browse</a></td>
 +
        <td>phosphate-containing compound metabolism</td>
 +
      </tr>
 +
      <tr>
 +
        <td>tyrA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=tyrA" target="_blank">browse</a></td>
 +
        <td>tyrA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=tyrA" target="_blank">browse</a></td>
 +
        <td>L-phenylalanine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>pheA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=pheA" target="_blank">browse</a></td>
 +
        <td>pheA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=pheA" target="_blank">browse</a></td>
 +
        <td>L-phenylalanine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>purD </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=purD" target="_blank">browse</a></td>
 +
        <td>purD </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=purD" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>purM </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=purM" target="_blank">browse</a></td>
 +
        <td>purM </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=purM" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>hisA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=hisA" target="_blank">browse</a></td>
 +
        <td>trpC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=trpC" target="_blank">browse</a></td>
 +
        <td>tryptophan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>hisI2 </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=hisI2" target="_blank">browse</a></td>
 +
        <td>hisI </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=hisI" target="_blank">browse</a></td>
 +
        <td>histidine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>purC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=purC" target="_blank">browse</a></td>
 +
        <td>purC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=purC" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>hisI </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=hisI" target="_blank">browse</a></td>
 +
        <td>hisI </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=hisI" target="_blank">browse</a></td>
 +
        <td>histidine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>purQ purL </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=purQ,purL" target="_blank">browse</a></td>
 +
        <td>purL </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=purL" target="_blank">browse</a></td>
 +
        <td>purine nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>hisA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=hisA" target="_blank">browse</a></td>
 +
        <td>hisA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=hisA" target="_blank">browse</a></td>
 +
        <td>histidine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>prsA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=prsA" target="_blank">browse</a></td>
 +
        <td>prs </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=prs" target="_blank">browse</a></td>
 +
        <td>nucleotide biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>aroA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=aroA" target="_blank">browse</a></td>
 +
        <td>aroA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=aroA" target="_blank">browse</a></td>
 +
        <td>chorismate biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>serC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=serC" target="_blank">browse</a></td>
 +
        <td>serC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=serC" target="_blank">browse</a></td>
 +
        <td>L-serine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>serB serB2 </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=serB,serB2" target="_blank">browse</a></td>
 +
        <td>serB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=serB" target="_blank">browse</a></td>
 +
        <td>L-serine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>rpi </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=rpi" target="_blank">browse</a></td>
 +
        <td>rpiA rpiB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=rpiA,rpiB" target="_blank">browse</a></td>
 +
        <td>D-ribose metabolism</td>
 +
      </tr>
 +
      <tr>
 +
        <td>dapE </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=dapE" target="_blank">browse</a></td>
 +
        <td>dapE </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=dapE" target="_blank">browse</a></td>
 +
        <td>cellular amino acid biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>cysE </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=cysE" target="_blank">browse</a></td>
 +
        <td>cysE </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=cysE" target="_blank">browse</a></td>
 +
        <td>cysteine biosynthesis </td>
 +
      </tr>
 +
      <tr>
 +
        <td>aroE </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=aroE" target="_blank">browse</a></td>
 +
        <td>ydiB aroE </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=ydiB,aroE" target="_blank">browse</a></td>
 +
        <td>chorismate biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>aroK </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=aroK" target="_blank">browse</a></td>
 +
        <td>aroL aroK </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=aroL,aroK" target="_blank">browse</a></td>
 +
        <td>chorismate biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>metZ metB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=metZ,metB" target="_blank">browse</a></td>
 +
        <td>metB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=metB" target="_blank">browse</a></td>
 +
        <td>methionine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>Rv1739c cysA cysW cysT subI </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=Rv1739c,cysA,cysW,cysT,subI" target="_blank">browse</a></td>
 +
        <td>cysZ cysA cysW cysU cysP sbp </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=cysZ,cysA,cysW,cysU,cysP,sbp" target="_blank">browse</a></td>
 +
        <td>sulfur compound metabolism</td>
 +
      </tr>
 +
      <tr>
 +
        <td>Rv1201c </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=Rv1201c" target="_blank">browse</a></td>
 +
        <td>dapD </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=dapD" target="_blank">browse</a></td>
 +
        <td>lysine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>Rv2754c thyA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=Rv2754c,thyA" target="_blank">browse</a></td>
 +
        <td>thyA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=thyA" target="_blank">browse</a></td>
 +
        <td>10-formyltetrahydrofolate biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>trxB2 </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=trxB2" target="_blank">browse</a></td>
 +
        <td>trxB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=trxB" target="_blank">browse</a></td>
 +
        <td>oxidation-reduction process</td>
 +
      </tr>
 +
      <tr>
 +
        <td>murE </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=murE" target="_blank">browse</a></td>
 +
        <td>murE </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=murE" target="_blank">browse</a></td>
 +
        <td>peptidoglycan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>murA </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=murA" target="_blank">browse</a></td>
 +
        <td>murA </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=murA" target="_blank">browse</a></td>
 +
        <td>peptidoglycan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>glmU </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=glmU" target="_blank">browse</a></td>
 +
        <td>glmU </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=glmU" target="_blank">browse</a></td>
 +
        <td>UDP-N-acetylglucosamine biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>murG </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=murG" target="_blank">browse</a></td>
 +
        <td>murG </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=murG" target="_blank">browse</a></td>
 +
        <td>peptidoglycan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>murD </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=murD" target="_blank">browse</a></td>
 +
        <td>murD </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=murD" target="_blank">browse</a></td>
 +
        <td>peptidoglycan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>murC </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=murC" target="_blank">browse</a></td>
 +
        <td>murC </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=murC" target="_blank">browse</a></td>
 +
        <td>peptidoglycan biosynthesis</td>
 +
      </tr>
 +
      <tr>
 +
        <td>murB </td>
 +
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=murB" target="_blank">browse</a></td>
 +
        <td>murB </td>
 +
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=murB" target="_blank">browse</a></td>
 +
        <td>peptidoglycan biosynthesis</td>
       </tr>
       </tr>
       <tr>
       <tr>
-
<td>accD3,accD5,Rv3281</td>
+
        <td>murF </td>
-
<td><a href="http://www.biocyc.org/group?id=biocyc14-5099-3591795959#maintablewrapper" target="_blank">here</a></td>
+
        <td><a href="http://biocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=355&lat=29779&orgid=MTBRV&gnids=murF" target="_blank">browse</a></td>
-
<td>accA,accD,accB,accC</td>
+
        <td>murF </td>
-
<td><a href="http://www.biocyc.org/group?id=biocyc14-5099-3591794876#maintablewrapper" target="_blank">here</a></td>
+
        <td><a href="http://www.ecocyc.org/overviewsWeb/celOv.shtml?zoomlevel=0&lon=600&lat=29765&orgid=ECOLI&gnids=murF" target="_blank">browse</a></td>
 +
        <td>peptidoglycan biosynthesis</td>
       </tr>
       </tr>
     </table>
     </table>
-
+
    </center>
-
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+
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Latest revision as of 14:29, 28 October 2013

E coli essential genes

List of predicted complementary knockouts

M Tuberculosis essential gene(s) BioCyc Link E coli knockout(s) BioCyc Link Cellular Process
accD3 accD5 Rv3281 browse accA accD accB accC browse fatty acid biosynthesis
argB browse argB browse arginine biosynthesis
ilvG ilvN ilvB ilvB2 ilvX browse ilvI ilvH ilvN ilvB ilvG_1 ilvG_2 ilvM browse valine biosynthesis
argD browse argD browse arginine biosynthesis
cysD cysN browse cysC browse phosphorylation
purB browse purB browse purine nucleotide biosynthesis
purB browse purB browse purine nucleotide biosynthesis
purA browse purA browse purine nucleotide biosynthesis
argC browse argC browse arginine biosynthesis
ddlA browse ddlB ddlA browse peptidoglycan biosynthesis
trpD browse trpD browse tryptophan biosynthesis
trpE Rv2859c browse trpD trpE browse tryptophan biosynthesis
asd browse asd browse homoserine biosynthesis
pyrB browse pyrI pyrB browse pyrimidine nucleotide biosynthesis
ask browse thrA metL lysC browse homoserine biosynthesis
aspC aspB browse aspC browse L-phenylalanine biosynthesis
hisG browse hisG browse histidine biosynthesis
fabG2 inhA fas pks15 browse fabZ fabA fabG fabF fabI fabB browse fatty acid biosynthesis
Rv1885c browse pheA tyrA browse L-phenylalanine biosynthesis
aroF browse aroC browse chorismate biosynthesis
cysM3 cysM cysK browse cysK cysM browse cysteine biosynthesis
metC browse malY metC browse transcription, DNA-dependent
lysA browse lysA browse cellular amino acid biosynthesis
dapF browse dapF browse cellular amino acid biosynthesis
aroG browse aroG aroH aroF browse L-phenylalanine biosynthesis
ilvD browse ilvD browse valine biosynthesis
dapB browse dapB browse diaminopimelate biosynthesis
dapA browse dapA browse diaminopimelate biosynthesis
dfrA browse folA browse 10-formyltetrahydrofolate biosynthesis
pyrC browse pyrC browse pyrimidine nucleotide biosynthesis
aroD browse aroD browse chorismate biosynthesis
aroB browse aroB browse chorismate biosynthesis
glmU browse glmU browse UDP-N-acetylglucosamine biosynthesis
glmS browse glmS browse UDP-N-acetylglucosamine biosynthesis
gmk browse gmk browse purine nucleotide biosynthesis
glnA3 glnA glnA1 glnA2 glnA4 browse puuA glnA browse putrescine catabolism
purF hisH browse purF browse purine nucleotide biosynthesis
murI browse murI browse peptidoglycan biosynthesis
guaA browse guaA browse GMP biosynthesis
Rv3273 Rv3588c browse |can| cynT browse cyanate catabolism
hisD browse hisD browse histidine biosynthesis
hisC cobC hisC2 browse hisC browse histidine biosynthesis
hisF browse hisH hisF browse histidine biosynthesis
hisB browse hisB browse histidine biosynthesis
trpC browse trpC browse tryptophan biosynthesis
ilvE browse ilvE browse valine biosynthesis
purH browse purH browse purine nucleotide biosynthesis
guaB1 guaB3 guaB2 browse guaB browse purine nucleotide biosynthesis
leuB browse leuB browse leucine biosynthesis
leuD leuC browse leuD leuC browse leucine biosynthesis
leuD leuC browse leuD leuC browse leucine biosynthesis
leuA browse leuA browse leucine biosynthesis
ilvC browse ilvC browse valine biosynthesis
ilvC browse ilvC browse valine biosynthesis
ilvE browse ilvE tyrB browse valine biosynthesis
fadD37 fabD browse fabD browse fatty acid biosynthesis
metK browse metK browse S-adenosylmethionine biosynthesis
metH browse metE metH browse methionine biosynthesis
ndkA browse ndk browse purine nucleotide biosynthesis
ndkA browse ndk browse purine nucleotide biosynthesis
argF browse argF argI browse arginine biosynthesis
pyrF browse pyrF browse purine nucleotide biosynthesis
umpA browse pyrE browse pyrimidine nucleotide biosynthesis
murX browse mraY browse peptidoglycan biosynthesis
cysH browse cysH browse sulfur compound metabolism
Rv0728c serA browse serA browse L-serine biosynthesis
pgmA browse pgm yqaB browse glucose metabolism
ppa browse ppa browse phosphate-containing compound metabolism
tyrA browse tyrA browse L-phenylalanine biosynthesis
pheA browse pheA browse L-phenylalanine biosynthesis
purD browse purD browse purine nucleotide biosynthesis
purM browse purM browse purine nucleotide biosynthesis
hisA browse trpC browse tryptophan biosynthesis
hisI2 browse hisI browse histidine biosynthesis
purC browse purC browse purine nucleotide biosynthesis
hisI browse hisI browse histidine biosynthesis
purQ purL browse purL browse purine nucleotide biosynthesis
hisA browse hisA browse histidine biosynthesis
prsA browse prs browse nucleotide biosynthesis
aroA browse aroA browse chorismate biosynthesis
serC browse serC browse L-serine biosynthesis
serB serB2 browse serB browse L-serine biosynthesis
rpi browse rpiA rpiB browse D-ribose metabolism
dapE browse dapE browse cellular amino acid biosynthesis
cysE browse cysE browse cysteine biosynthesis
aroE browse ydiB aroE browse chorismate biosynthesis
aroK browse aroL aroK browse chorismate biosynthesis
metZ metB browse metB browse methionine biosynthesis
Rv1739c cysA cysW cysT subI browse cysZ cysA cysW cysU cysP sbp browse sulfur compound metabolism
Rv1201c browse dapD browse lysine biosynthesis
Rv2754c thyA browse thyA browse 10-formyltetrahydrofolate biosynthesis
trxB2 browse trxB browse oxidation-reduction process
murE browse murE browse peptidoglycan biosynthesis
murA browse murA browse peptidoglycan biosynthesis
glmU browse glmU browse UDP-N-acetylglucosamine biosynthesis
murG browse murG browse peptidoglycan biosynthesis
murD browse murD browse peptidoglycan biosynthesis
murC browse murC browse peptidoglycan biosynthesis
murB browse murB browse peptidoglycan biosynthesis
murF browse murF browse peptidoglycan biosynthesis
Table style from the HTML Table Generator
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