Safety

Ethylene pathway selection

When we decided to engineer a biological system able to produce ethylene, we looked at all the existing natural pathways. We firstly checked the plants ethylene producing pathway.

An unwanted byproduct is produced in the last step of ethylene synthesis: hydrogen cyanide, an highly toxic gas that inhibits the cytochrome C oxydase enzyme. At very low concentration (around 300ppm) it can kill a human within 10 minutes. Plants however have a detoxyfication mechanism that gets rid of this hazardous acid. That's why we don't die when we eat a fruit!

This pathway would have been the easiest choice for us to produce ethylene because it already contains SAM synthetase that could have been exploited even for methyl salycilate production. We decided to go for a more SAFE alternative pathway to produce ethylene:

Pseudomonas Syrigae pv., a plant pathogen bacteria, is able to produce ethylene exploiting only one enzyme. 2-Oxoglutarate Oxygenase/Decarboxylase enzyme takes 2-Oxoglutarate as substrate and transforms it into ethylene + water + carbon-dioxyde (Goto M. Plant and Cell Physiology (2012) 26, 141-150).

A solution to avoid unsafe storage of ethylene cylinders

Ethylene is the simplest unsatured hydrocarbon. Like all hydrocarbons, ethylene is an asphyxiant and combustible. In the ripen facility it is stored in high pressure cylinders that can be very dangerous. Using our system can avoid this problem since a bacteria can not produce ethylene in a concentration high enaugh to be explosive (from 2.7% to 34% vol is needed). In fact with an air volume / culture volume ratio equal to 4, we detected and quantified about 200 ppm of ethylene. ;

Precautions taken

We always worked with our producing ethylene bacteria under the hood and with special glass air-tight jars. Changing the coltures every 24 hours prevented the increase of concentration inside the jars and so the risk of explosion. Also for MeSa we worked in safe conditions as it's nocive and irritating. We carefully checked the MSDS both for ethylene and MeSa.

Safety Form

We used some strains of E. coli (NEB 10beta, NEB5 alpha, BL21, TOP10, TB1, JM29) and one the strain of B. subtilis 168. All these strains belong to risk group 1. In our project we used only two biobrick coming from organisms of the second risk group that are:

• BBa_C0040: confers tetracycline resistance and comes from Acinetobacter baumannii
• BBa_J45319: catalyses the production of salycilate from chorismate and comes from Pseudomonas aeruginosa