Team:KAIT Japan/Protocol

From 2013.igem.org

(Difference between revisions)
Line 53: Line 53:
#Storage
#Storage
 +
=='''Colony PCR'''==
 +
:'''Reagent'''
 +
:*TaKaRa Ex Taq(5units/μL) 0.5μL
 +
:*10×Ex Taq buffer 10μL
 +
:*dNTP Mixture(2.5Meach) 8μL
 +
:*Primer F(10μM) 4μL
 +
:*Primer R(10μM) 4μL
 +
:*Template(E.coli DH5α)
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:*sterilized water(73.5μL)
 +
:'''Conditions of the thermal cycler'''
 +
#95°C(2min)
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#95°C(30sec)
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#54°C(30sec)
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#72°C(40sec)
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#72°C(5min)
 +
#4°C(Save)
 +
#*2-4:40cycle
 +
#*gradient:57-62°C(+0.1c)

Revision as of 04:09, 19 August 2013

KAIT Japan 2013RogoTop.png

KAIT Japan2013 Kanako.png KAIT Japan 2013 iGEMRogo.png

KAIT Japan home.png Home
KAIT Japan team.png Team
KAIT Japan project.png Project
KAIT Japan parts.png Parts

KAIT_Japan_protocol.png Protocol

KAIT Japan notebook.png Notebook
KAIT Japan results.png Results
KAIT Japan safety.png Safety
KAIT Japan human practice.png Human Practice


Protocol

Miniprep

  1. Add culture medium 1mL in a microtube
  2. Centrifuge(1min,4°C,10,000rpm)
  3. Remove the supernatant to new microtube
  4. Repeat 1-3
  5. Add SolI 100μL and Vortex
  6. Add SolII 200μL and invert
  7. ice-cold 3min
  8. Add SolIII 150μL and invert
  9. ice-cold 3min
  10. Centrifuge(10min,4°C,10,000rpm)
  11. Add the supernatant to new microtube
  12. Add RNase 0.8μL
  13. Incubation(1h,37°C)
  14. Add phenol:chloroform 200μL
  15. Vortex
  16. Centrifuge(5min,4°C,10,000rpm)
  17. Add the supernatant to new microtube
  18. Add chloroform 200μL
  19. Tapping
  20. Centrifuge(1min,4°C,10,000rpm)
  21. Add the supernatant(150μL) to new microtube
  22. Add 3M-acetic acid 15μL
  23. Add 100%Et 400μL and invert
  24. Centrifuge(20min,4°C,10,000rpm)
  25. Remove the supernatant to new microtube
  26. Add 70%Et 400 μL
  27. Tapping
  28. Centrifuge(20min,4°C,10,000rpm)
  29. Remove the supernatant to new microtube
  30. Dry
  31. Add TE buffer 50μL
  32. Storage

Colony PCR

Reagent
  • TaKaRa Ex Taq(5units/μL) 0.5μL
  • 10×Ex Taq buffer 10μL
  • dNTP Mixture(2.5Meach) 8μL
  • Primer F(10μM) 4μL
  • Primer R(10μM) 4μL
  • Template(E.coli DH5α)
  • sterilized water(73.5μL)
Conditions of the thermal cycler
  1. 95°C(2min)
  2. 95°C(30sec)
  3. 54°C(30sec)
  4. 72°C(40sec)
  5. 72°C(5min)
  6. 4°C(Save)
    • 2-4:40cycle
    • gradient:57-62°C(+0.1c)