Team:USTC CHINA/Notebook/Protocols/Sample analysis
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- | <h1> | + | <h1>Sample analysis</h1> |
- | <p> | + | <p>Sample analysis |
- | + | 1. Preparation of soluble and insoluble cell extracts from B. subtilis | |
- | 1. | + | - harvest cells by centrifugation (10 min, 6,000 x g, 4 °C) |
- | + | - wash and resuspend in 50 mM sodium phosphate buffer (pH 7.0) at an OD600 of 10 | |
- | + | - disrupt cells by ultrasonication (12 W, 6 x 15 pulses with 15 sec intervals) in 1.5 ml | |
- | + | Eppendorf tubes containing 1 ml of cell suspension, supplemented with lysozyme | |
- | + | (250 μg/μl, CB-0663-5GAM), on ice | |
- | + | 破碎1:超声 | |
- | + | - alternatively, cells can be disrupted by beat beating: | |
- | + | disrupt three times with glass beads (0.1 mm in diameter) (1 g/ml of cell suspension) in | |
- | + | an orbital mixer at 180 V, with the mix kept on ice for 3 min between each disruption | |
- | + | 破碎2:玻璃珠机械破碎 | |
- | + | - take 100 μl of the preparation as first total protein sample (T1) | |
- | + | 得到T1 | |
- | + | - remove cell debris by centrifugation at 4,300 x g, 10 min | |
+ | - take 100 μl of the supernatant for the second total protein sample (T2) | ||
+ | - spin at 8.200 x g (10 min, 4 °C) | ||
+ | to separate into insoluble (I) and soluble (S) protein fractions. | ||
+ | - per sample use the amount of protein corresponding to 0.025 of OD600 for separation by | ||
+ | SDS-PAGE | ||
+ | - analyze samples by immunoblotting with specific antiserum | ||
+ | |||
+ | |||
+ | |||
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Revision as of 14:41, 25 September 2013