Team:HIT-Harbin/Parts
From 2013.igem.org
Parts
Sequence optimization was done using JCat(Java Codon Adaptation Tool)[1] developed by Andreas Grote
CODON OPTIMIZATION FOR HRPS AND HRPR GENE
![](https://static.igem.org/mediawiki/2013/f/f8/Hrps_sequence_cai_before_optimization.png)
Figure1: Codon Adaptation of hrpS gene in E.coli before optimization
![](https://static.igem.org/mediawiki/2013/d/d3/Hrps_sequence_cai_after_optimization.png)
Figure2: Codon Adaptation of hrpS gene in E.coli after optimization
![](https://static.igem.org/mediawiki/2013/a/a8/Hrpr_sequence_cai_before_optimization.png)
Figure3: Codon Adaptation of hrpR gene in E.coli before optimization
![](https://static.igem.org/mediawiki/2013/8/8b/Hrpr_sequence_cai_after_optimization.png)
Figure4: Codon Adaptation of hrpR gene in E.coli after optimization
reference
[1] Andreas Grote et al. JCat: a novel tool to adapt codon usage of a target gene to its potential expression host. Nucleic Acids Research 2005 Vol.33<groupparts>iGEM013 HIT-Harbin</groupparts>