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Team:Paris Bettencourt/Project/Target/FBA
From 2013.igem.org
E coli essential genes
List of predicted complementary knockouts
| M Tuberculosis essential gene(s) | BioCyc Link | E coli knockout(s) | BioCyc Link | Cellular Process |
|---|---|---|---|---|
| accD3 accD5 Rv3281 | browse | accA accD accB accC | browse | fatty acid biosynthesis |
| argB | browse | argB | browse | arginine biosynthesis |
| ilvG ilvN ilvB ilvB2 ilvX | browse | ilvI ilvH ilvN ilvB ilvG_1 ilvG_2 ilvM | browse | valine biosynthesis |
| argD | browse | argD | browse | arginine biosynthesis |
| cysD cysN | browse | cysC | browse | phosphorylation |
| purB | browse | purB | browse | purine nucleotide biosynthesis |
| purB | browse | purB | browse | purine nucleotide biosynthesis |
| purA | browse | purA | browse | purine nucleotide biosynthesis |
| argC | browse | argC | browse | arginine biosynthesis |
| ddlA | browse | ddlB ddlA | browse | peptidoglycan biosynthesis |
| trpD | browse | trpD | browse | tryptophan biosynthesis |
| trpE Rv2859c | browse | trpD trpE | browse | tryptophan biosynthesis |
| asd | browse | asd | browse | homoserine biosynthesis |
| pyrB | browse | pyrI pyrB | browse | pyrimidine nucleotide biosynthesis |
| ask | browse | thrA metL lysC | browse | homoserine biosynthesis |
| aspC aspB | browse | aspC | browse | L-phenylalanine biosynthesis |
| hisG | browse | hisG | browse | histidine biosynthesis |
| fabG2 inhA fas pks15 | browse | fabZ fabA fabG fabF fabI fabB | browse | fatty acid biosynthesis |
| Rv1885c | browse | pheA tyrA | browse | L-phenylalanine biosynthesis |
| aroF | browse | aroC | browse | chorismate biosynthesis |
| cysM3 cysM cysK | browse | cysK cysM | browse | cysteine biosynthesis |
| metC | browse | malY metC | browse | transcription, DNA-dependent |
| lysA | browse | lysA | browse | cellular amino acid biosynthesis |
| dapF | browse | dapF | browse | cellular amino acid biosynthesis |
| aroG | browse | aroG aroH aroF | browse | L-phenylalanine biosynthesis |
| ilvD | browse | ilvD | browse | valine biosynthesis |
| dapB | browse | dapB | browse | diaminopimelate biosynthesis |
| dapA | browse | dapA | browse | diaminopimelate biosynthesis |
| dfrA | browse | folA | browse | 10-formyltetrahydrofolate biosynthesis |
| pyrC | browse | pyrC | browse | pyrimidine nucleotide biosynthesis |
| aroD | browse | aroD | browse | chorismate biosynthesis |
| aroB | browse | aroB | browse | chorismate biosynthesis |
| glmU | browse | glmU | browse | UDP-N-acetylglucosamine biosynthesis |
| glmS | browse | glmS | browse | UDP-N-acetylglucosamine biosynthesis |
| gmk | browse | gmk | browse | purine nucleotide biosynthesis |
| glnA3 glnA glnA1 glnA2 glnA4 | browse | puuA glnA | browse | putrescine catabolism |
| purF hisH | browse | purF | browse | purine nucleotide biosynthesis |
| murI | browse | murI | browse | peptidoglycan biosynthesis |
| guaA | browse | guaA | browse | GMP biosynthesis |
| Rv3273 Rv3588c | browse | |can| cynT | browse | cyanate catabolism |
| hisD | browse | hisD | browse | histidine biosynthesis |
| hisC cobC hisC2 | browse | hisC | browse | histidine biosynthesis |
| hisF | browse | hisH hisF | browse | histidine biosynthesis |
| hisB | browse | hisB | browse | histidine biosynthesis |
| trpC | browse | trpC | browse | tryptophan biosynthesis |
| ilvE | browse | ilvE | browse | valine biosynthesis |
| purH | browse | purH | browse | purine nucleotide biosynthesis |
| guaB1 guaB3 guaB2 | browse | guaB | browse | purine nucleotide biosynthesis |
| leuB | browse | leuB | browse | leucine biosynthesis |
| leuD leuC | browse | leuD leuC | browse | leucine biosynthesis |
| leuD leuC | browse | leuD leuC | browse | leucine biosynthesis |
| leuA | browse | leuA | browse | leucine biosynthesis |
| ilvC | browse | ilvC | browse | valine biosynthesis |
| ilvC | browse | ilvC | browse | valine biosynthesis |
| ilvE | browse | ilvE tyrB | browse | valine biosynthesis |
| fadD37 fabD | browse | fabD | browse | fatty acid biosynthesis |
| metK | browse | metK | browse | S-adenosylmethionine biosynthesis |
| metH | browse | metE metH | browse | methionine biosynthesis |
| ndkA | browse | ndk | browse | purine nucleotide biosynthesis |
| ndkA | browse | ndk | browse | purine nucleotide biosynthesis |
| argF | browse | argF argI | browse | arginine biosynthesis |
| pyrF | browse | pyrF | browse | purine nucleotide biosynthesis |
| umpA | browse | pyrE | browse | pyrimidine nucleotide biosynthesis |
| murX | browse | mraY | browse | peptidoglycan biosynthesis |
| cysH | browse | cysH | browse | sulfur compound metabolism |
| Rv0728c serA | browse | serA | browse | L-serine biosynthesis |
| pgmA | browse | pgm yqaB | browse | glucose metabolism |
| ppa | browse | ppa | browse | phosphate-containing compound metabolism |
| tyrA | browse | tyrA | browse | L-phenylalanine biosynthesis |
| pheA | browse | pheA | browse | L-phenylalanine biosynthesis |
| purD | browse | purD | browse | purine nucleotide biosynthesis |
| purM | browse | purM | browse | purine nucleotide biosynthesis |
| hisA | browse | trpC | browse | tryptophan biosynthesis |
| hisI2 | browse | hisI | browse | histidine biosynthesis |
| purC | browse | purC | browse | purine nucleotide biosynthesis |
| hisI | browse | hisI | browse | histidine biosynthesis |
| purQ purL | browse | purL | browse | purine nucleotide biosynthesis |
| hisA | browse | hisA | browse | histidine biosynthesis |
| prsA | browse | prs | browse | nucleotide biosynthesis |
| aroA | browse | aroA | browse | chorismate biosynthesis |
| serC | browse | serC | browse | L-serine biosynthesis |
| serB serB2 | browse | serB | browse | L-serine biosynthesis |
| rpi | browse | rpiA rpiB | browse | D-ribose metabolism |
| dapE | browse | dapE | browse | cellular amino acid biosynthesis |
| cysE | browse | cysE | browse | cysteine biosynthesis |
| aroE | browse | ydiB aroE | browse | chorismate biosynthesis |
| aroK | browse | aroL aroK | browse | chorismate biosynthesis |
| metZ metB | browse | metB | browse | methionine biosynthesis |
| Rv1739c cysA cysW cysT subI | browse | cysZ cysA cysW cysU cysP sbp | browse | sulfur compound metabolism |
| Rv1201c | browse | dapD | browse | lysine biosynthesis |
| Rv2754c thyA | browse | thyA | browse | 10-formyltetrahydrofolate biosynthesis |
| trxB2 | browse | trxB | browse | oxidation-reduction process |
| murE | browse | murE | browse | peptidoglycan biosynthesis |
| murA | browse | murA | browse | peptidoglycan biosynthesis |
| glmU | browse | glmU | browse | UDP-N-acetylglucosamine biosynthesis |
| murG | browse | murG | browse | peptidoglycan biosynthesis |
| murD | browse | murD | browse | peptidoglycan biosynthesis |
| murC | browse | murC | browse | peptidoglycan biosynthesis |
| murB | browse | murB | browse | peptidoglycan biosynthesis |
| murF | browse | murF | browse | peptidoglycan biosynthesis |
Table style from the HTML Table Generator
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