Team:TU-Munich/Modeling/Filter

From 2013.igem.org

(Difference between revisions)
(→Fixed number of remediation rafts)
(→Filter calculator)
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To simplify the testing of use cases and for the comfort of future users, we implemented a filter calculator. The filter calculator either calculates the number of remediation rafts needed to degrade a certain amount of pollutant, or it computes the residual subtrate concentration after a certain number of remediation rafts is used.
To simplify the testing of use cases and for the comfort of future users, we implemented a filter calculator. The filter calculator either calculates the number of remediation rafts needed to degrade a certain amount of pollutant, or it computes the residual subtrate concentration after a certain number of remediation rafts is used.
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=== Fixed number of remediation rafts ===
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=== Calculate number of remediation rafts ===
<html><div id="rafts">
<html><div id="rafts">
<p id="enzyme">Select enzyme: <select>
<p id="enzyme">Select enzyme: <select>
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<script src="https://2013.igem.org/Team:TU-Munich/TUM13_filter-calculator.js?action=raw&ctype=text/javascript" type="text/javascript"></script>
<script src="https://2013.igem.org/Team:TU-Munich/TUM13_filter-calculator.js?action=raw&ctype=text/javascript" type="text/javascript"></script>
</html>
</html>
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 +
=== Calculate pollutant degradation ===
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<html><div id="substrate">
 +
<p id="enzyme">Select enzyme: <select>
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            <option selected="selected">EreB</option>
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            <option>Laccase</option>
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            <option>Custom</option>
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        </select></p>
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<p id="activity">Enter enzyme activity: <input type="text" />k<sub>cat</sub>/k<sub>M</sub></p>
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<p id="mass">Enter molecular mass: <input type="text" />Da</p>
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<p id="flow">Flowrate: <input type="text" />L/day</p>
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<p id="substrate">Subtrate concentration before filter: <input type="text" />nM</p>
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<p id="number">Number of remediation rafts: <input type="text" /></p>
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<p><input type="submit" value="Calculate substrate concentration" /></p>
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</div></html>
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Revision as of 00:16, 4 October 2013


Figure 1: Work flow for the generation of transgenic moss.

Filter calculator

To simplify the testing of use cases and for the comfort of future users, we implemented a filter calculator. The filter calculator either calculates the number of remediation rafts needed to degrade a certain amount of pollutant, or it computes the residual subtrate concentration after a certain number of remediation rafts is used.

Calculate number of remediation rafts

Select enzyme:

Enter enzyme activity: kcat/kM

Enter molecular mass: Da

Flowrate: L/day

Subtrate concentration before filter: nM

Desired substrate concentration after filter: nM

Calculate pollutant degradation

Select enzyme:

Enter enzyme activity: kcat/kM

Enter molecular mass: Da

Flowrate: L/day

Subtrate concentration before filter: nM

Number of remediation rafts:

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