Team:ETH Zurich/Parameter

From 2013.igem.org

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<td>&alpha; <sub>GFP</sub></td>
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<td>&alpha;<sub>GFP</sub></td>
<td> 2 &mu;M min<sup>-1</sup></td>
<td> 2 &mu;M min<sup>-1</sup></td>
<td>GFP synthesis rate</td>
<td>GFP synthesis rate</td>
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<td>d<sub>GFP</sub></td>
<td>d<sub>GFP</sub></td>
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<td>0.0692 min<sup>-1</sup </td>
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<td>0.0692 min<sup>-1</sup> </td>
<td> GFP degradation rate</td>
<td> GFP degradation rate</td>
<td>Basu <i> et al.</i>, 2005</td>
<td>Basu <i> et al.</i>, 2005</td>
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<td>row 11, cell 1</td>
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<td>&alpha;<sub>GusA</sub></td>
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<td>row 11, cell 2</td>
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<td>4.01127 x 10<sup>-6</sup> min<sup>-1</sup></td>
<td>row 11, cell 3</td>
<td>row 11, cell 3</td>
<td>row 11, cell 4</td>
<td>row 11, cell 4</td>
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<td>row 13, cell 1</td>
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<td>d<sub>GFP</sub></td>
<td>row 13, cell 2</td>
<td>row 13, cell 2</td>
<td>row 13, cell 3</td>
<td>row 13, cell 3</td>

Revision as of 16:27, 3 September 2013

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Parameters

Parameter Value Description Reference
DAHL 4.9 x 10-6 cm2/s AHL diffusion constant Stewart P.S., 2003
Cagar 0.9 Reduced diffusion coefficient Fatin-Rouge et al., 2004
αAHL 0.01 min-1 AHL synthesis rate
dAHL 0.01 min-1 AHL degradation rate (intracellular) Basu et al., 2005
dAHL,e 4.8135 x 10-4min-1 AHL degradation rate (extracellular)
ρR 0.5 μM-3min-1 LuxR/AHL dimerization Basu et al., 2005
KR 0.01 μM LuxR/AHL activation coefficient Basu et al., 2005
η 1 Hill coefficient Basu et al., 2005
αGFP 2 μM min-1 GFP synthesis rate Basu et al., 2005
dGFP 0.0692 min-1 GFP degradation rate Basu et al., 2005
αGusA 4.01127 x 10-6 min-1 row 11, cell 3 row 11, cell 4
dGFP row 13, cell 2 row 13, cell 3 row 13, cell 4
row 14, cell 1 row 14, cell 2 row 14, cell 3 row 14, cell 4
row 15, cell 1 row 15, cell 2 row 15, cell 3 row 15, cell 4
row 16, cell 1 row 16, cell 2 row 16, cell 3 row 16, cell 4
row 17, cell 1 row 17, cell 2 row 17, cell 3 row 17, cell 4
row 18, cell 1 row 18, cell 2 row 18, cell 3 row 18, cell 4
row 19, cell 1 row 19, cell 2 row 19, cell 3 row 19, cell 4
row 20, cell 1 row 20, cell 2 row 20, cell 3 row 20, cell 4
row 21, cell 1 row 21, cell 2 row 21, cell 3 row 21, cell 4
row 22, cell 1 row 22, cell 2 row 22, cell 3 row 22, cell 4
row 23, cell 1 row 23, cell 2 row 23, cell 3 row 23, cell 4
row 24, cell 1 row 24, cell 2 row 24, cell 3 row 24, cell 4
row 25, cell 1 row 25, cell 2 row 25, cell 3 row 25, cell 4
row 26, cell 1 row 26, cell 2 row 26, cell 3 row 26, cell 4
row 27, cell 1 row 27, cell 2 row 27, cell 3 row 27, cell 4
row 28, cell 1 row 28, cell 2 row 28, cell 3 row 28, cell 4
row 29, cell 1 row 29, cell 2 row 29, cell 3 row 29, cell 4
row 29, cell 1 row 29, cell 2 row 29, cell 3 row 29, cell 4