Team:ETH Zurich/Parameter

From 2013.igem.org

Revision as of 09:26, 10 September 2013 by Blockmoka (Talk | contribs)

Header2.png
80px-Eth igem logo.png


Parameters

Parameter Value Description Reference
DAHL 4.9 x 10-6 cm2/s AHL diffusion constant Stewart P.S., 2003
Cagar 0.9 Reduced diffusion coefficient Fatin-Rouge et al., 2004
αAHL 0.01 min-1 AHL synthesis rate
dAHL 0.01 min-1 AHL degradation rate (intracellular) Basu et al., 2005
dAHL,e 4.8135 x 10-4min-1 AHL extracellular decay Horswill et al., 2007
ρR 0.5 μM-3min-1 LuxR/AHL dimerization Basu et al., 2005
KR 0.01 μM LuxR/AHL activation coefficient Basu et al., 2005
η 1 Hill coefficient Basu et al., 2005
αGFP 2 μM min-1 GFP synthesis rate Basu et al., 2005
dGFP 0.0692 min-1 GFP degradation rate Basu et al., 2005
αGusA GusA synthesis rate
dGusA 4.01127 x 10-6 s-1 GusA decay (half-life 55oC 2 days) Jefferson, 1995
row 14, cell 1 row 14, cell 2 row 14, cell 3 row 14, cell 4
row 15, cell 1 row 15, cell 2 row 15, cell 3 row 15, cell 4
row 16, cell 1 row 16, cell 2 row 16, cell 3 row 16, cell 4
row 17, cell 1 row 17, cell 2 row 17, cell 3 row 17, cell 4
row 18, cell 1 row 18, cell 2 row 18, cell 3 row 18, cell 4
row 19, cell 1 row 19, cell 2 row 19, cell 3 row 19, cell 4
row 20, cell 1 row 20, cell 2 row 20, cell 3 row 20, cell 4

A little overview of the parameters used in the models.