Team:ETH Zurich/Attributions

From 2013.igem.org

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Efficient secretory production of alkaline phosphatase by high cell density culture of recombinant Escherichia coli using the Bacillus sp. endoxylanase signal sequence.<br>[http://www.ncbi.nlm.nih.gov/pubmed/10919319 PubMed]</p>
Efficient secretory production of alkaline phosphatase by high cell density culture of recombinant Escherichia coli using the Bacillus sp. endoxylanase signal sequence.<br>[http://www.ncbi.nlm.nih.gov/pubmed/10919319 PubMed]</p>
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<p> Kiernan JA; Biotech Histochem. 2007 Apr; 82(2):73-103. <br>
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<p> Kiernan JA; Biotech Histochem. 2007 Apr; 82(2):73-103. <span id="Kiernan2007"></span><br>
Indigogenic substrates for detection and localization of enzymes. <br> [http://www.ncbi.nlm.nih.gov/pubmed/17577701 PubMed]</p>
Indigogenic substrates for detection and localization of enzymes. <br> [http://www.ncbi.nlm.nih.gov/pubmed/17577701 PubMed]</p>
<p> Jefferson RA; US 5432081 A. 1995 Jul <br>
<p> Jefferson RA; US 5432081 A. 1995 Jul <br>
Host cells transformed with the ''E. coli'' glucoronide permease gene </p>
Host cells transformed with the ''E. coli'' glucoronide permease gene </p>

Revision as of 11:22, 4 September 2013

Header2.png
80px-Eth igem logo.png

The work in the lab as well as the modeling part was fulfilled by the team members only.
We want to thanks our Advisors for supporting the project design, result interpretation and trouble shooting.

Acknowledgement

Thanks to Dr. Johannes Haerle (from Panke Group, D-BSSE Basel) for the hydrolase parts
Thanks to the iGEM 2012 Team ETH Zurich for the general structure of the template header code

References

Quorum sensing

Hai-Bao Zhang, Lian-Hui Wang, Lian-Hui Zhang, 1 JUN 2007 ; DOI: 10.1002/9780471729259.mc01c03s05
UNIT 1C.3 Detection and Analysis of Quorum-Quenching Enzymes Against Acyl Homoserine Lactone Quorum-Sensing Signals
Wiley Online library

Ravn L, Christensen AB, Molin S, Givskov M, Gram L. J Microbiol Methods ; 2001 Apr;44(3):239-51
Methods for detecting acylated homoserine lactones produced by Gram-negative bacteria and their application in studies of AHL-production kinetics
PubMed

Lingchong You, Robert Sidney Cox, Ron Weiss3 & Frances H. Arnold; Nature 428, 868-871
Programmed population control by cell–cell communication and regulated killing
Nature

Ramiz Daniel1 Jacob R. Rubens Rahul Sarpeshkar & Timothy K. Lu;doi:10.1038/nature12148
Synthetic analog computation in living cells
Nature

Subhayu Basu, Yoram Gerchman, Cynthia H. Collins, Frances H. Arnold & Ron Weiss;Nature 434, 1130-1134 (28 April 2005)
A synthetic multicellular system for programmed pattern formation
Nature

Grant D. Geske, Margrith E. Mattmann, Helen E. Blackwell;Bioorganic & Medicinal Chemistry Letters Volume 18, Issue 22, 15 November 2008, Pages 5978–5981
Evaluation of a focused library of N-aryl l-homoserine lactones reveals a new set of potent quorum sensing modulators
Science direct

Horswill AR, Stoodley P, Stewart PS, Parsek MR; Anal Bioanal Chem. 2007 Jan; 387(2): 371–380.
The effect of the chemical, biological, and physical environment on quorum sensing in structured microbial communities
Pubmed


Hydrolases

J. C. Jokerst,J. A. Adkins,B. Bisha,M. M. Mentele, L. D. Goodridge and C. S. Henry ; Chem. 2012, 84, 2900−2907
Development of a Paper-Based Analytical Device for Colorimetric, Detection of Select Foodborne Pathogens
pubs.acs

Choi JH, Jeong KJ, Kim SC, Lee SY; Appl Microbiol Biotechnol. 2000 Jun; 53(6): 640-5.
Efficient secretory production of alkaline phosphatase by high cell density culture of recombinant Escherichia coli using the Bacillus sp. endoxylanase signal sequence.
PubMed

Kiernan JA; Biotech Histochem. 2007 Apr; 82(2):73-103.
Indigogenic substrates for detection and localization of enzymes.
PubMed

Jefferson RA; US 5432081 A. 1995 Jul
Host cells transformed with the E. coli glucoronide permease gene