Team:TU-Munich/Modeling/Protein Predictions

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(→Analysis of Receptor Sequences)
(→Prediction of Signal Peptides)
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===Prediction of Signal Peptides===
===Prediction of Signal Peptides===
<div class="box-left">[http://www.cbs.dtu.dk/services/SignalP SignalP]</div>
<div class="box-left">[http://www.cbs.dtu.dk/services/SignalP SignalP]</div>
-
<div class="box-right">figure</div>
+
<div class="box-right">[[File:TUM13 Modeling_Signal-P.png|thumb|center|350px]]</div>
-
 
+
===Prediction of Transmembrane Regions===
===Prediction of Transmembrane Regions===

Revision as of 18:18, 2 July 2013


Prediction of Protein Structures

Text

Search for Homologous Structures using HHprd

Text
figure

Prediction of Possible Structure using iTasser

Text
figure



Analysis of Receptor Sequences

Text


Prediction of Signal Peptides

[http://www.cbs.dtu.dk/services/SignalP SignalP]
TUM13 Modeling Signal-P.png

Prediction of Transmembrane Regions

[http://www.cbs.dtu.dk/services/TMHMM TMHMM]
figure


Prediction of Cellular Localization

[http://wolfpsort.org Wolfpsort]
figure



Choice of the SERK Receptor

Text
figure

Analysis of Protein-Ligand Interaction

Text

Structure based prediction using PDBePISA

Text
figure

References:

http://www.ncbi.nlm.nih.gov/pubmed/6327079 Edens et al., 1984

  1. http://www.ncbi.nlm.nih.gov/pubmed/6327079 Edens et al., 1984 Edens, L., Bom, I., Ledeboer, A. M., Maat, J., Toonen, M. Y., Visser, C., and Verrips, C. T. (1984). Synthesis and processing of the plant protein thaumatin in yeast. Cell, 37(2):629–33.




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