Team:USTC CHINA/Notebook/Protocols/Plasmid mini-prep

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<div id="breadcrumb"><a href="https://2013.igem.org/Team:USTC_CHINA">Home</a> &gt; <a href="https://2013.igem.org/Team:USTC_CHINA/Notebook">notebook</a> &gt; <a href="https://2013.igem.org/Team:USTC_CHINA/Notebook/Protocols">protocols</a></div></div>
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<div id="breadcrumb"><a href="https://2013.igem.org/Team:USTC_CHINA">Home</a> &gt; <a href="https://2013.igem.org/Team:USTC_CHINA/Notebook">Notebook</a> &gt; <a href="https://2013.igem.org/Team:USTC_CHINA/Notebook/Protocols">Protocols</a> &gt; <a href="https://2013.igem.org/Team:USTC_CHINA/Notebook/Protocols/Plasmid mini-prep">Plasmid mini-prep</a></div></div>
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<h1>Gel Extraction</h1>
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<h1>Plasmid mini-prep</h1>
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<p>Performed with AxyPrep 96-well DNA Gel Extraction Kit (type: AP-96-GX)
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<p><span>Performed with Shanghai Sangon Plasmid miniprep kit.</span></br>
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Protocol
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1. Preparation</br>
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1. Excise gel slice containing DNA fragment of interest.
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1) Make sure the RNase A has been added into Buffer P1;</br>
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2. Add 3×sample volume of Buffer DE-A.
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2) Make sure the ethanol has been added into Wash Solution;</br>
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Incubate at 75° C for 15-20 min or until gel melts completely.
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3) Make sure there is no deposit in Buffer P2 and P3;</br>
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Add 0.5 × Buffer DE-A volume of Buffer DE-B.
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2. Collect the deposit of bacteria from 1.5ml~5ml bacteria liquid (centrifuge at 8,000×g for 2 min).</br>
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<img src="https://static.igem.org/mediawiki/2013/4/4d/2013igemustc-china_Protocol1.png" width="580" height="200" />  
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3. Add 250μl Buffer P1 into the deposit and suspend it thoroughly.</br>
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3. Binding sample DNA(Centrifuge at 5,000 - 6,000×g for 5 min)
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4. Add 250μl Buffer P2, mix gently and keep standing in room temperature for 2~4min.</br>
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5. Add 350μl Buffer P3 and mix gently for 5~10 times.</br>
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4. Add 800 μl of Buffer W2 (5,000 - 6,000×g for 1 min)
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6. Precipitate the bacteria fragments (centrifuge at 12,000×g for 5~10 min) and extract the supernatant (centrifuge at 8,000×g for 30s).</br>
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Repeat wash with Buffer W2
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7. Add 500 μl Buffer DW1, centrifuge at 9,000×g for 30s</br>
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Centrifuge empty plate for 5 min at 5,000 - 6,000×g to remove residue W2.
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8. Add 500 μl Wash Solution, centrifuge at 9,000×g for 30s. Repeat this process for one more time. Centrifuge the empty bottle at 9,000×g for 60s.</br>
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9. Add 50~100μl Elution Buffer and collect the plasmid.</br></p>
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5. Elute with 50 μl of Eluent or Deionized Water.(5,000 - 6,000×g, 5min)
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<img src="https://static.igem.org/mediawiki/2013/3/3d/Plasmid_mini-prep11_%E5%89%AF%E6%9C%AC.png" width="265" height="443" />  </div>
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<img src="https://static.igem.org/mediawiki/2013/3/3c/Plasmid_mini-prep21_%E5%89%AF%E6%9C%AC.png" width="199" height="291" /> </div>
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<img src="https://static.igem.org/mediawiki/2013/7/7d/Prep31_%E5%89%AF%E6%9C%AC.png" width="231" height="208" /> </div>
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<div class="port-sidebar-border"><h>notebook</h></div>
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<div id="t1"><a href="https://2013.igem.org/Team:USTC_CHINA/Notebook/Timeline">timeline</a></div>
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<div id="t1"><a href="https://2013.igem.org/Team:USTC_CHINA/Notebook/Timeline">Timeline</a></div>
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<div id="t1"><a class="active" href="https://2013.igem.org/Team:USTC_CHINA/Notebook/Protocols">protocols</a></div></div>
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<div id="t1"><a class="active" href="https://2013.igem.org/Team:USTC_CHINA/Notebook/Protocols">Protocols</a></div></div>
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Latest revision as of 16:50, 27 September 2013

Plasmid mini-prep

Performed with Shanghai Sangon Plasmid miniprep kit.
1. Preparation
1) Make sure the RNase A has been added into Buffer P1;
2) Make sure the ethanol has been added into Wash Solution;
3) Make sure there is no deposit in Buffer P2 and P3;
2. Collect the deposit of bacteria from 1.5ml~5ml bacteria liquid (centrifuge at 8,000×g for 2 min).
3. Add 250μl Buffer P1 into the deposit and suspend it thoroughly.
4. Add 250μl Buffer P2, mix gently and keep standing in room temperature for 2~4min.
5. Add 350μl Buffer P3 and mix gently for 5~10 times.
6. Precipitate the bacteria fragments (centrifuge at 12,000×g for 5~10 min) and extract the supernatant (centrifuge at 8,000×g for 30s).
7. Add 500 μl Buffer DW1, centrifuge at 9,000×g for 30s
8. Add 500 μl Wash Solution, centrifuge at 9,000×g for 30s. Repeat this process for one more time. Centrifuge the empty bottle at 9,000×g for 60s.
9. Add 50~100μl Elution Buffer and collect the plasmid.