Team:Evry/Notebook/w12

From 2013.igem.org

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<b>02/09/13</b></br>
<b>02/09/13</b></br>
To further improve the interpretability of the plate reading, we need to transfer our construction from a BL21 to a TOP10 strain. As a start, we transformed the following constructions:</br>
To further improve the interpretability of the plate reading, we need to transfer our construction from a BL21 to a TOP10 strain. As a start, we transformed the following constructions:</br>
-
<div style="text-align:center;">- AceB with LacI</div>
+
<div style="padding-left:10%;">- AceB with LacI</div>
-
<div style="text-align:center;">- FecA with GFP</div>
+
<div style="padding-left:10%;">- FecA with GFP</div>
-
<div style="text-align:center;">- FepA with GFP</div>
+
<div style="padding-left:10%;">- FepA with GFP</div>
-
<div style="text-align:center;">- FepA with LacI</div>
+
<div style="padding-left:10%;">- FepA with LacI</div>
<div style="text-align:center;">- Fes with GFP</div>
<div style="text-align:center;">- Fes with GFP</div>
<div style="text-align:center;">- Fes with LacI</div>
<div style="text-align:center;">- Fes with LacI</div>

Revision as of 16:11, 3 September 2013

Iron coli project

Week 12: 2nd September - 8th September

TECAN

02/09/13
To further improve the interpretability of the plate reading, we need to transfer our construction from a BL21 to a TOP10 strain. As a start, we transformed the following constructions:

- AceB with LacI
- FecA with GFP
- FepA with GFP
- FepA with LacI
- Fes with GFP
- Fes with LacI
- YbiL with GFP
- YbiL with LacI
- YncE with GFP
- YncE with LacI
- control positive with pSB1A3
- control negative

03/09/13

Plasmid 3

We launch another PC to get Enterobactins A, B, C, D, E and F genes. Add the recquired primers in each tube:
  1. EntA: primers 065 and 066
  2. EntB: primers 067 and 068
  3. EntC: primers 069 and 070
  4. EntD: primers 071 and 072
  5. EntE: primers 073 and 074
  6. EntF: primers 075 and 076
  7. Positive controle: primers 009 and 010
  8. Negative controle: primers 009 and 010
We use pEntC as our controle.
For more details about our primers, see the corresponding page.
We then prepared a master mix 1 with:
  • 9 x 27,5 = 247,5 µL of distilled water
  • 9 x 1 = 9 µL of dNTPs
  • 9 x 10 = 90 µL of Q5 Buffer
  • 9 x 0,5 = 4,5 µL of Q5 For the negative controle, we added 1 µL of distilled water in tube 8 and 39 µL of master mix 1.
    For other tubes (6 genes and positive controle), we added 8 µL of genomic DNA in the master mix 1. Then add 40 µL of master mix 1' in each tube.