Team:Paris Saclay/Notebook/July/12

From 2013.igem.org

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(Notebook : July 12)
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='''Notebook : July 12'''=
 
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==''summary''==
 
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For fnr regulator system:
 
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*Performed 4 transformations(3 terminator and 1 RBS+LacZ+terminator into competent cells).
 
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*Design of oligo for amplifying AmiCP+RBS.
 
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For PCBs sensor system:
 
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*Had the promoter BphR1 clone 5 and 6, promoter BphR2 clone 3 and 4, promoter BphA1 clone 5 to 8 in stock.
 
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*Plasmid DNA extraction from promoter BphR1 clone 5 and 6, promoter BphR2 clone 3 and 4, promoter BphA1 clone 5 to 8.
 
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=='''Lab work'''==
 
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A.aero/anaerobic regulation system:
 
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*BioBrick RBS+LacZ+terminator in plasmid PSB1C3
 
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<br>
 
<u>Transformation</u>
<u>Transformation</u>
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*Simple terminator BBa_B0010 into plasmid PSB1A2.
*Simple terminator BBa_B0010 into plasmid PSB1A2.
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see protocol Tranformation.
 
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B.PCBs sensor system:
 
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<p>The stock and extraction of promoter BphR1 clone 5 and 6, promoter BphR2 clone 3 and 4, promoter BphA1 clone 5 to 8 performed according to protocol. Please see protocol DNA extraction and sample stock.</p>
 
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{{Team:Paris_Saclay/incl_debut_generique}}
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='''Notebook : July 12'''=
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=='''Lab work'''==
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==='''A - Aerobic/Anaerobic regulation system''===
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===='''Objective : obtaining Bba_K1155003, Bba_K1155007'''====
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===='''1 -Transformation of Bba_I732019, Bba_B0015, Bba_B0017, Bba_B0010'''====
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Zhou
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{|
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| style="border:1px solid black;padding:5px;background-color:#DE;" |
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Transformation of 07/10/13 of Bba_B0010 and Bba_I732019 didn't works. We will do it again.
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|}
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Protocol : [[Team:Paris_Saclay/Protocols/Bacterial transformation|Bacterial transformation]]
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===='''1 -Design of RBS-AmilCP oligos'''====
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Abdou, Anaïs
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We used software gene manager to find the correct oligopeptides for amplification of RBS-Amil CP.
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==='''B - PCB sensor system'''===
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===='''Objective : obtaining Bba_K1155001, Bba_K1155002 and BphR2'''====
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===='''1 - Stock of clones 5, 6, 7, 8 for BphA1, clones 5, 6 for BphR1 and clones 3, 4 for BphR2'''====
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Zhou
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Used quantities :
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* Glycerol 85% : 425
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* Culture : 1µL
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===='''2 - Extraction of clones 5, 6, 7, 8 for BphA1, clones 5, 6 for BphR1 and clones 3, 4 for BphR2 from DH5α'''====
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Abdou, Sheng
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Protocol : [[Team:Paris_Saclay/extraction|High copy plamid extraction]]
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===='''3 - Streak of BphA1 and BphR2'''====
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Anaïs
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We strek 25 colonies of 07/10/13 transformation of BphA1 and BphR2 in new solid culture.
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|[[Team:Paris Saclay/Notebook/July/11|<big>Previous day</big>]]
|[[Team:Paris Saclay/Notebook/July/11|<big>Previous day</big>]]
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|<big>Next week</big>
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{{Team:Paris_Saclay/incl_fin}}

Revision as of 14:09, 25 September 2013


Transformation

We suspended the DNA with water from iGEM plate and performed several transformation.


  • BBa_I732019: LacZ+RBS+terminator into plasmid BBa_I732950(ampicillin resitant).
  • BBa_B0015: 2 terminators BBa_B0010+BBa_B0012(4F plate 3 kit 2013) into plasmid PSB1C3.
  • BBa_B0017: 2 terminators BBa_B0010+BBa_B0010 into plasmid PSB1C3.
  • Simple terminator BBa_B0010 into plasmid PSB1A2.








Contents

Notebook : July 12

Lab work

'A - Aerobic/Anaerobic regulation system

Objective : obtaining Bba_K1155003, Bba_K1155007

1 -Transformation of Bba_I732019, Bba_B0015, Bba_B0017, Bba_B0010

Zhou

Transformation of 07/10/13 of Bba_B0010 and Bba_I732019 didn't works. We will do it again.

Protocol : Bacterial transformation

1 -Design of RBS-AmilCP oligos

Abdou, Anaïs

We used software gene manager to find the correct oligopeptides for amplification of RBS-Amil CP.


B - PCB sensor system

Objective : obtaining Bba_K1155001, Bba_K1155002 and BphR2

1 - Stock of clones 5, 6, 7, 8 for BphA1, clones 5, 6 for BphR1 and clones 3, 4 for BphR2

Zhou

Used quantities :

  • Glycerol 85% : 425
  • Culture : 1µL

2 - Extraction of clones 5, 6, 7, 8 for BphA1, clones 5, 6 for BphR1 and clones 3, 4 for BphR2 from DH5α

Abdou, Sheng

Protocol : High copy plamid extraction

3 - Streak of BphA1 and BphR2

Anaïs

We strek 25 colonies of 07/10/13 transformation of BphA1 and BphR2 in new solid culture.

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