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| /* Page Header */ | | /* Page Header */ |
| #page-header {background: url("https://static.igem.org/mediawiki/2013/a/ab/SCAU-Doubleborder.gif") repeat-x bottom; margin:0 0 20px; padding:0 15px 20px; position:relative;} | | #page-header {background: url("https://static.igem.org/mediawiki/2013/a/ab/SCAU-Doubleborder.gif") repeat-x bottom; margin:0 0 20px; padding:0 15px 20px; position:relative;} |
- | #page-header h1, #page-header strong {font-size: 26px;margin:0 0 5px;letter-spacing:-1px;color:#262626;font-decoration:none} | + | #page-header h1, #page-header strong {font-size: 26px;margin:0 0 5px;letter-spacing:-1px;color:#262626;font-decoration:none;border-bottom: 0px solid rgb(170, 170, 170);} |
| #page-header p { | | #page-header p { |
| margin:0; | | margin:0; |
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| /* =Homepage */ | | /* =Homepage */ |
| #callout {padding:0;float:left;margin:0 30px 0 0;width:300px;} | | #callout {padding:0;float:left;margin:0 30px 0 0;width:300px;} |
- | #callout h2 {text-decoration:none;font-size:38px;font-weight:bold;line-height:38px;margin:0 0 10px;text-transform:uppercase;letter-spacing:-2px;color:#212126;} | + | #callout h2 {font-size:38px;font-weight:bold;line-height:38px;margin:0 0 10px;text-transform:uppercase;letter-spacing:-2px;color:#212126;border-bottom: 0px solid rgb(170, 170, 170);} |
| #callout h3 { | | #callout h3 { |
| font-size:18px; | | font-size:18px; |
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| font-style:italic; | | font-style:italic; |
| font-size:center;} | | font-size:center;} |
- | #hpslider {background: url("") no-repeat center center;min-height: 250px;margin:10px 0 25px;float:left; width:580px;}
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- | .home .st_portfolio {margin-bottom:15px;}
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- | .home .post {background:none;margin-bottom:20px; }
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- | .home .st_portfolio .entry-thumb {margin:0 0 5px;}
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- | .home .post .entry-thumb {margin:0 0 10px;}
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| #home-portfolio ul, #home-blog ul, #home-blocks ul {list-style:none;padding:0;margin: 0 -15px 20px 0;} | | #home-portfolio ul, #home-blog ul, #home-blocks ul {list-style:none;padding:0;margin: 0 -15px 20px 0;} |
| #home-portfolio li {float:left;margin:0 15px 10px 0;width:216px;text-align:center;} | | #home-portfolio li {float:left;margin:0 15px 10px 0;width:216px;text-align:center;} |
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| color:#fff;} | | color:#fff;} |
| | | |
- | /* =Flexslider */
| + | #sponsor1{float:left;} |
- | | + | #sponsor2{float:right;} |
- | .flex-container a:active, .flexslider a:active, .flex-container a:focus, .flexslider a:focus {outline: none;}
| + | |
- | .slides, .flex-control-nav, .flex-direction-nav {margin: 0; padding: 0; list-style: none}
| + | |
- | /* FlexSlider Necessary Styles */
| + | |
- | .flexslider {width: 100%; margin: 0; padding: 0;}
| + | |
- | .flexslider .slides > li {display: none; -webkit-backface-visibility: hidden;}
| + | |
- | .flexslider .slides img {max-width: 100%; display: block;border-radius:2px;-moz-border-radius:2px;-webkit-border-radius:2px;}
| + | |
- | .flex-pauseplay span {text-transform: capitalize;}
| + | |
- | .slides:after {content: "."; display: block; clear: both; visibility: hidden; line-height: 0; height: 0;}
| + | |
- | html[xmlns] .slides {display: block;}
| + | |
- | * html .slides {height: 1%;}
| + | |
- | /* No JavaScript Fallback */
| + | |
- | .no-js .slides > li:first-child {display: block;}
| + | |
- | /* FlexSlider Styling */
| + | |
- | .flexslider {background: #fff; position: relative; zoom: 1;margin: 0 0 20px;}
| + | |
- | .flexslider .slides {zoom: 1;}
| + | |
- | .flexslider .slides > li {position: relative;}
| + | |
- | .flex-container {zoom: 1; position: relative;}
| + | |
- | /* Caption style */
| + | |
- | .flex-caption {background:#232326; padding: 10px; margin: 0; position: absolute; left: 20px; bottom: 20px; color: #fafafa; font-size: 13px; line-height: 18px;max-width: 55%;}
| + | |
- | /* Direction Nav */
| + | |
- | .flex-direction-nav { height: 0; position:absolute; bottom: 0; right:20px; }
| + | |
- | .flex-direction-nav li a {display: block; position: absolute; bottom: 20px; cursor: pointer; background:#232326; color:#fafafa; font-family:"Trebuchet MS", Arial, Helvetica, sans-serif; padding: 3px 10px; text-align:center;border-radius:2px;-moz-border-radius:2px;-webkit-border-radius:2px; }
| + | |
- | .flex-direction-nav li a:hover {text-decoration:none;}
| + | |
- | .flex-direction-nav li .next {right: 0;}
| + | |
- | .flex-direction-nav li .prev {right: 30px;}
| + | |
- | .flex-direction-nav li .disabled {opacity: .3; filter:alpha(opacity=30); cursor: default;}
| + | |
- | /* Control Nav */
| + | |
- | .flex-control-nav {position: absolute; bottom: 20px;text-align:right;right:90px;}
| + | |
- | .flex-control-nav li {margin: 0 0 0 5px; display: inline-block; zoom: 1; *display: inline;}
| + | |
- | .flex-control-nav li:first-child {margin: 0;}
| + | |
- | .flex-control-nav li a {width: 13px; height: 13px; display: block; background: url("../images/flex-control-nav.png") no-repeat; cursor: pointer; text-indent: 9999px;overflow: hidden; transition:none;-moz-transition:none;}
| + | |
- | .flex-control-nav li a:hover {background-position: 0 -13px;}
| + | |
- | .flex-control-nav li a.active {background-position: 0 -26px; cursor: default;}
| + | |
- | /* Flexslider - Gallery Post Format */
| + | |
- | .format-gallery .flex-direction-nav li a {bottom:10px;}
| + | |
- | .format-gallery .flex-direction-nav {right:10px;}
| + | |
| </style> | | </style> |
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| <nav id="primary-nav" role="navigation" class="clearfix"> | | <nav id="primary-nav" role="navigation" class="clearfix"> |
| <ul id="menu-primary-nav" class="nav sf-menu clearfix"> | | <ul id="menu-primary-nav" class="nav sf-menu clearfix"> |
- | <li class="current-menu-item"><a href="https://2013.igem.org/Team:SCAU-China" >Home</a></li> | + | <li><a href="https://2013.igem.org/Team:SCAU-China" >Home</a></li> |
| <li><a href="#">Team</a> | | <li><a href="#">Team</a> |
| <ul class="sub-menu"> | | <ul class="sub-menu"> |
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| </ul> | | </ul> |
| </li> | | </li> |
- | <li><a href="#">Project</a> | + | <li class="current-menu-item"><a href="#">Project</a> |
| <ul class="sub-menu"> | | <ul class="sub-menu"> |
| <li><a href="https://2013.igem.org/Team:SCAU-China/Project" >Overview</a></li> | | <li><a href="https://2013.igem.org/Team:SCAU-China/Project" >Overview</a></li> |
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| <li><a href="#">Results</a> | | <li><a href="#">Results</a> |
| <ul class="sub-menu"> | | <ul class="sub-menu"> |
- | <li><a href="https://2013.igem.org/Team:SCAU-China/Modeling" >Modeling</a></li>
| |
| <li><a href="https://2013.igem.org/Team:SCAU-China/Parts" >Biobricks</a></li> | | <li><a href="https://2013.igem.org/Team:SCAU-China/Parts" >Biobricks</a></li> |
| <li><a href="https://2013.igem.org/Team:SCAU-China/Achievements" >Achievements</a></li> | | <li><a href="https://2013.igem.org/Team:SCAU-China/Achievements" >Achievements</a></li> |
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| <li><a href="https://2013.igem.org/Team:SCAU-China/HP/Survey">Survey</a></li> | | <li><a href="https://2013.igem.org/Team:SCAU-China/HP/Survey">Survey</a></li> |
| <li><a href="https://2013.igem.org/Team:SCAU-China/HP/Communication">Communication</a></li> | | <li><a href="https://2013.igem.org/Team:SCAU-China/HP/Communication">Communication</a></li> |
- | <li><a href="https://2013.igem.org/Team:SCAU-China/HP/Game">card game Game</a></li> | + | <li><a href="https://2013.igem.org/Team:SCAU-China/HP/Game">card Game</a></li> |
| </ul> | | </ul> |
| </li> | | </li> |
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| | | |
| </header> | | </header> |
- | <!-- /#header -->
| + | |
| + | <!-- #page-header --> |
| + | <div id="page-header"> |
| + | <h1>OP Degradation</h1> |
| + | <p>Degradation of Parathion into PNP</p> |
| + | </div> |
| + | |
| <!-- #primary --> | | <!-- #primary --> |
- | <div id="primary" class="clearfix">
| + | <div id="primary" class="clearfix"> |
- | <!-- #content -->
| + | <section id="content1" role="main" class="clearfix fullwidth"> |
- | <section id="content1" role="main" class="fullwidth">
| + | <p style="word-break:break-all"> As there are no genes that can react to parathion specially, we need to degrade parathion firstly and then using biosensor to sense its product p-nitrophenol (PNP). The bacterial organophosphorus hydrolase enzyme hydrolyzes and detoxifies a broad range of toxic organophosphate pesticides by cleaving the various phosphorus-ester bonds. In the first part, we needed to use these enzymes to degrade parathion into PNP. </p> |
- | <div id="feature" class="clearfix">
| + | <center><p><img src="https://static.igem.org/mediawiki/2013/a/a3/SCAU-CHINA_1.jpg"></p></center> |
- | <div id="callout"> | + | <center><font size=-2>Parathion Degradation Pathway</font></center> |
- | <h2>Overview</h2>
| + | <p style="word-break:break-all"> As we search the registry of parts, we found a part that is related to our project: BBa_K215090 (OpdA). But we hoped to obtain various enzymes and display them onto the membrane using ice nucleation protein to construct an effective degradation system, so we decided to test another organophosphorus hydrolysis from Flavobacterium sp. </p> |
- | <p> Organophosphorus pesticides (OP), which are highly toxic, are still used in some developing countries. Many terrestrial and aquatic ecosystems across the world are contaminated with OP. Residues of OP in food are also often reported</p>
| + | <p style="word-break:break-all"> PNP has a strong absorbance at 397nm. Naturally, absorbance at 397nm can be measured to test the efficiencies of parathion degradation.At first, a standard curve which reflected the relationship between PNP concentration and absorbance at 397nm was required and we quickly drew it by setting a PNP concentration gradient and testing their absorbance. </p> |
- | <p> This year, our goal is to construct a system that can sensing and degrade organophosphorus pesticides.</p>
| + | <center><p><img src="https://static.igem.org/mediawiki/2013/6/6b/SCAU-CHINA_Chart1.jpg"></p></center> |
- | <p><a href="#">View Our Work →</a></p>
| + | <center><font size=-2>PNP Abosorbance Curve</font></center> |
- | </div>
| + | <p style="word-break:break-all"> And then, we transformed opd into E.coli and tested their function. As our expectation, the result showed that under the function of these gene, parathion successfully degraded into PNP and DEP. </p> |
- | <div id="hpslider" class="flexslider">
| + | <center><p><img src="https://static.igem.org/mediawiki/2013/0/0a/SCAU-CHINA_Chart2.jpg"></p></center> |
- | <script type="text/javascript" charset="utf-8">
| + | <center><font size=-2>Efficiency of OPH</font></center> |
- | jQuery(window).load(function() {
| + | <p style="word-break:break-all"> However,to standardize opd gene, we must mutate three sites. We do not have enough experiment time, so we have not standardize this part yet.</p> |
- | jQuery('#hpslider').flexslider({
| + | </section> |
- | keyboardNav: false,
| + | </div> |
- | prevText: "<",
| + | |
- | nextText: ">"
| + | |
- | });
| + | |
- | });
| + | |
- | </script>
| + | |
- | <ul class="slides">
| + | |
- | <li><img src="https://static.igem.org/mediawiki/2013/1/12/SCAU-China_slide1.jpg" alt="" /> </li>
| + | |
- | <li><img src="https://static.igem.org/mediawiki/2013/2/26/SCAU-China_slide2.jpg" alt="" /> </li>
| + | |
- | <li><img src="https://static.igem.org/mediawiki/2013/0/0d/SCAU-China_slide3.jpg" alt="" /> </li>
| + | |
- | </ul>
| + | |
- | </div>
| + | |
- | </div>
| + | |
- | <div id="home-blocks" class="clearfix">
| + | |
- | <h3 class="deco"><span class="outer"><span class="inner">Our Project</span></span></h3>
| + | |
- | <ul class="clearfix">
| + | |
- | <li>
| + | |
- | <h3><a href="https://2013.igem.org/Team:SCAU-China/Project/OPdegradation">OP Degradation</a></h3>
| + | |
- | <p> The bacterial organophosphorus hydrolase enzyme hydrolyzes and detoxifies a broad range of toxic organophosphate pesticides. In the first part, we need to use these enzymes to degrade parathion into PNP.</p>
| + | |
- | </li>
| + | |
- | <li>
| + | |
- | <h3><a href="https://2013.igem.org/Team:SCAU-China/Project/PNPsensor" >PNP Sensor</a></h3>
| + | |
- | <p> The second part is a biosensor of the hydrolysis product P-Nitrophenol (PNP). There is no operon that can react to parathion. We foucus on constructing a PNP sensor, which can reflect the existence of parathion.</p>
| + | |
- | </li>
| + | |
- | <li>
| + | |
- | <h3><a href="https://2013.igem.org/Team:SCAU-China/Project/PNPdegradation" >PNP Degradation</a></h3>
| + | |
- | <p> We also design a PNP degradation system. We use enzymes NphA1 and NphA2 to degrade PNP, but fail. We find another pathway to degrade PNP in 5 steps with 4 enzymes in Rhodococcus sp. Strain PN1. </p>
| + | |
- | </li>
| + | |
- | <li>
| + | |
- | <h3><a href="https://2013.igem.org/Team:SCAU-China/Project/SuicideSystem" >Suicide System</a></h3>
| + | |
- | <p> With the public increasingly concerned about biosafety, we conceived a suicide gene circuit to ensure these recombinanational bacteria can only survive in laboratories and not cause horizontal gene transfer.</p>
| + | |
- | </li>
| + | |
- | </ul>
| + | |
- | </div>
| + | |
- | <div id="home-blog" class="clearfix"> </div>
| + | |
- | </section>
| + | |
- | <!-- /#content -->
| + | |
- | </div>
| + | |
- | <!-- /#primary -->
| + | |
- | <!-- #footer -->
| + | |
- | <footer id="footer" class="clearfix">
| + | |
- | <p> Sponsors</p>
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- | <p><a href="http://www.scau.edu.cn"><img src="https://static.igem.org/mediawiki/2013/d/d3/Scau_sclo.png" alt="" width="396" height="111"></a> <a href="http://life.scau.edu.cn"><img src="https://static.igem.org/mediawiki/2013/f/fa/Scau_lifelogo.png" alt="" width="453" height="116"></a></p>
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- | </footer>
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- | <!-- /#footer -->
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| <!-- #footer-bottom --> | | <!-- #footer-bottom --> |
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| <nav id="footer-nav"> | | <nav id="footer-nav"> |
| <ul class="nav-footer"> | | <ul class="nav-footer"> |
- | <li><a href="https://2013.igem.org/Team:SCAU-China/Team" >About Us</a></li> | + | <li>If you can't browse, please use Chrome or Firefox.</li> |
| </ul> | | </ul> |
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