Team:Paris Saclay/Notebook/August/8
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(Difference between revisions)
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=='''Lab work'''== | =='''Lab work'''== | ||
- | ==='''Aerobic/Anaerobic regulation system'''=== | + | ==='''A - Aerobic/Anaerobic regulation system'''=== |
- | ====''' | + | ===='''Obtaining the PSB3K3 backbone plasmid'''==== |
=====1 - Electrophoresis of BBa_J004450 digested by EcoRI/Pst1 to check if the digestion was right===== | =====1 - Electrophoresis of BBa_J004450 digested by EcoRI/Pst1 to check if the digestion was right===== | ||
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We let the plasmid precipitate during the night. | We let the plasmid precipitate during the night. | ||
+ | |||
+ | ===='''Obtaining RBS_LacZ+Term_PSB1C3'''==== | ||
+ | |||
+ | =====1 - Colony PCR on e.coli with RBS_LacZ+Term_PSB1C3 for 25 colonies===== | ||
+ | |||
+ | Anaïs | ||
+ | |||
+ | *Colony counting : | ||
+ | **Low concentration petri dish : 47 colonies | ||
+ | **High concentration petri dish : 145 colonies | ||
+ | |||
+ | *Preparation of 700µL of Master mix | ||
+ | **H<sub>2</sub>O : 590µL | ||
+ | **dNTP : 28µL | ||
+ | **VF2 primer : 3.5µL | ||
+ | **VR primer : 3.5µL | ||
+ | **DreamTaq buffer 10x : 70µL | ||
+ | **DreamTaq enzyme : 5µL | ||
+ | |||
+ | |||
{{Team:Paris_Saclay/incl_fin}} | {{Team:Paris_Saclay/incl_fin}} |
Revision as of 15:33, 9 August 2013
Contents |
Notebook : August 8
Lab work
A - Aerobic/Anaerobic regulation system
Obtaining the PSB3K3 backbone plasmid
1 - Electrophoresis of BBa_J004450 digested by EcoRI/Pst1 to check if the digestion was right
Damir, Nadia
IMAGE |
|
Expected sizes :
- PSB3K3 : 2750kb
- GFP : 1069kb
We obtained fragments of the right size. Now we can purify the PSB3K3 plasmid.
2 - Gel purification of the PSB3K3 plasmid from BBa_J004450 digested by EcoRI/Pst1
2.1 - Migration of the remaining 45µL of BBa_J004450 digested by EcoRI/Pst1
Anaïs
IMAGE |
|
Now we can do a gel purification of the highest band which contains the PSB3K3 plasmid.
2.2 - Electroelution of the highest band to extract the PSB3K3 plasmid from the gel
Nadia
Protocol : Electroelution
We let the plasmid precipitate during the night.
Obtaining RBS_LacZ+Term_PSB1C3
1 - Colony PCR on e.coli with RBS_LacZ+Term_PSB1C3 for 25 colonies
Anaïs
- Colony counting :
- Low concentration petri dish : 47 colonies
- High concentration petri dish : 145 colonies
- Preparation of 700µL of Master mix
- H2O : 590µL
- dNTP : 28µL
- VF2 primer : 3.5µL
- VR primer : 3.5µL
- DreamTaq buffer 10x : 70µL
- DreamTaq enzyme : 5µL