Team:INSA Toulouse/contenu/lab practice/notebook/calendar/recomb

From 2013.igem.org

(Difference between revisions)
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Assembling PhiC31 mutated with the terminator into pSB1C3.<br><br>
Assembling PhiC31 mutated with the terminator into pSB1C3.<br><br>
19/07<br>
19/07<br>
-
Assembling of rbs.FimE with terminator into pSB1C3.<br>
+
Assembling of rbs.FimE with terminator into pSB1C3.<br><br>
-
Arrival of the synthesis.<br><br>
+
20/07<br>
20/07<br>
Verification of the clonage.<br><br>
Verification of the clonage.<br><br>
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15/08<br>
15/08<br>
Cloning:<br>
Cloning:<br>
-
- Tp901 in pSB1C3<br>
+
- Tp901.1 in pSB1C3<br>
  - Bxb1 in Psb1C3
  - Bxb1 in Psb1C3
<br><br>
<br><br>
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19/08<br>
19/08<br>
0,8% gel:<br>
0,8% gel:<br>
-
  - no insert for tp901 cloning<br>
+
  - no insert for Tp901.1 cloning<br>
-
- correct inserts for bxb1 after E/P restriction <br></li> </ul></li>
+
- correct inserts for Bxb1 after E/P restriction <br>
 +
20/08<br>
 +
Cloning :<br>
 +
-Bxb1 with terminator<br>
 +
-RBS+FimE+terminator with weak promoter<br>
 +
-weak promoter with RBS<br>
 +
21/08<br>
 +
Verification of Tp901.1 and PhiC31* in Strataclones by restriction with ClaI, NcOI and HindIII. Results are good.<br>
 +
22/08<br>
 +
In vivo amplification of PhiC31* and Tp901.1 in Strataclones<br>
 +
23/08<br>
 +
Gel extraction of PhiC31* and Tp901.1 from Strataclones<br>
 +
 
 +
 
 +
 
 +
 
 +
 
 +
<br></li> </ul></li>

Revision as of 14:06, 30 September 2013

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Calendar

Recombinases

July 2013

  • Week 6 (15-21 July)
    15/07
    Assembling Bxb1 with terminator by 3A assembling into pSB1A3
    Assembling FimE recombinase with rbs by 3A assembling into pSB1C3
    Mutagenese of PhiC31 from the Suiti Parts (A24) to delete the EcoRI restriction site
    PCR to extract Tp901.1 from the Bonnet parts

    16/07
    Purification of the PCR and verification by gel.
    Miniprep for the verification of the clonage, Bxb1.term and rbs.FimE.
    For the mutagenese of PhiC31, restriction by DpnI and transformation.

    17/07
    Assembling Tp901.1 with terminator by 3A assembling.
    PCR of extraction of the vector A24 with Phic31 mutated.

    18/07
    Assembling PhiC31 mutated with the terminator into pSB1C3.

    19/07
    Assembling of rbs.FimE with terminator into pSB1C3.

    20/07
    Verification of the clonage.

  • Week 7 (22-28 July)
    22/07
    Assembling PhiC31*...

August 2013

  • Week 8 (29-4 August)
    30/7
    PCR to extract the recombinase PhiC31 (after mutation to delete the EcoR1 site).
    31/07
    0,8% gels to confirm:
    - mutation and extraction of PCR products : some correct inserts
    Cloning:
    - PhiC31 in PSB1C3 carrying a terminator
    - PhiC31 + terminator in PSB1K3 with 3A method
    - PhiC31 in PSB1C3

  • Week 9 (5-11 August)
    05/08
    Minipreps then 0,8% gel : failed.
    08/08
    Still trying to clone : PhiC31 in PSB1C3
    09/08
    Minipreps and 0,8% gel:
    - correct length for Phic31, but not the right sequence according to more restrictions.

  • Week 10 (12-18 August)

  • 12/08
    New PCR to extract mutant PhiC31
    14/08
    Gel extraction of mutant PhiC31 and transfer into strata clone.
    15/08
    Cloning:
    - Tp901.1 in pSB1C3
    - Bxb1 in Psb1C3

  • Week 11 (19-25 August)
    19/08
    0,8% gel:
    - no insert for Tp901.1 cloning
    - correct inserts for Bxb1 after E/P restriction
    20/08
    Cloning :
    -Bxb1 with terminator
    -RBS+FimE+terminator with weak promoter
    -weak promoter with RBS
    21/08
    Verification of Tp901.1 and PhiC31* in Strataclones by restriction with ClaI, NcOI and HindIII. Results are good.
    22/08
    In vivo amplification of PhiC31* and Tp901.1 in Strataclones
    23/08
    Gel extraction of PhiC31* and Tp901.1 from Strataclones



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