Team:Evry/Modelmeta3

From 2013.igem.org

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<h2>Materials and methods</h2>
<h2>Materials and methods</h2>
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<u><b>Enzymes production</b></u><br/>
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The first equations are taken from the <a href="https://2013.igem.org/Team:Evry/Modelmeta1">sensing model</a> and the <a href="https://2013.igem.org/Team:Evry/Modelmeta2">inverter model</a>.
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<img src="https://static.igem.org/mediawiki/2013/e/e9/Metasys2.png"/><br/>
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The [mRNA] and [Enz] equations are alike. The prodction rates are K<sub>r</sub> for the mRNA and K<sub>p</sub> for the enzymmes, and both variables have a negative degadation term:<br/>
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<img src="https://static.igem.org/mediawiki/2013/3/31/Dmrnadenz.png"/>
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The [mRNA] and [Enz] equations are alike. The prodction rates are Kr for the mRNA and Kp for the enzymmes, and both variables have a negative degadation term:<br/>
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<u><b>Enterobactin production</b></u><br/>
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<img src="https://static.igem.org/mediawiki/2013/3/31/Dmrnadenz.png"/>
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<u>Finally:</u><br/>
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<b><u>The final system:</u></b><br/>
<img src="https://static.igem.org/mediawiki/2013/5/54/SystemeMetabolique.png"/>
<img src="https://static.igem.org/mediawiki/2013/5/54/SystemeMetabolique.png"/>
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Revision as of 18:07, 27 October 2013

Iron coli project

Final Enterobactin production model

Introduction

This is the final step of the Enterobactin production model. We just have to combine all the previous models and add the delay of enzymes production as well as the enterobactin production time.This model includes the synthetic sensing system, the inverter system and the chemical reactions leading to the enterobactin.

Observations

Goals

Materials and methods

Enzymes production
The first equations are taken from the sensing model and the inverter model.
The [mRNA] and [Enz] equations are alike. The prodction rates are Kr for the mRNA and Kp for the enzymmes, and both variables have a negative degadation term:

Enterobactin production

The final system:

Results

Conclusion

Models and scripts

References: