Team:Paris Saclay/Notebook/August/14

From 2013.igem.org

(Difference between revisions)
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===='''Objective : obtaining ...'''====
===='''Objective : obtaining ...'''====
-
=====1 - Gel electrophoresis to check the digestion of Bba_K1155004,Bba_K1155005, Bba_K1155006 by EcoRI and SpeI=====
+
=====1 - Electrophoresis to check the digestion of Bba_K1155004,Bba_K1155005, Bba_K1155006 by EcoRI and SpeI=====
Anaïs, Nadia
Anaïs, Nadia
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   We obtained fragments of the right size but in very few quantity. We do it again but this time we will use more quantity of enzymes AND ADN ?!
   We obtained fragments of the right size but in very few quantity. We do it again but this time we will use more quantity of enzymes AND ADN ?!
-
=====2 - Digestion of Bba_K1155004,Bba_K1155005, Bba_K1155006 by SpeI and EcoRI/SpeI=====
+
=====2 - Digestion of Bba_K1155000, Bba_K1155004,Bba_K1155005, Bba_K1155006 by SpeI and EcoRI/SpeI=====
Anaïs, Nadia
Anaïs, Nadia
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**ADN : 20µL
**ADN : 20µL
**H20 : 3µL  
**H20 : 3µL  
 +
 +
====3 - Electrophoresis to check the digestion of Bba_K1155000, Bba_K1155004,Bba_K1155005, Bba_K1155006 by SpeI and EcoRI/SpeI=====
 +
Anaïs, Nadia
 +
 +
{|
 +
| style="width:350px;border:1px solid black;" | [[]]
 +
| style="width:350px;border:1px solid black;vertical-align:top;" |
 +
*Well 1 : 5µL of BBa_K1155000 digested by SpeI
 +
*Well 2 : 5µL of BBa_K1155006 digested by SpeI
 +
*Well 3 : 5µL of BBa_K1155005 digested by SpeI
 +
*Well 4 : 5µL of BBa_K1155004 digested by SpeI
 +
*Well 5 : 6µL DNA Ladder
 +
*Well 6 : 5µL of BBa_K1155000 digested by EcoRI/SpeI
 +
*Well 7 : 5µL of BBa_K1155006 digested by EcoRI/SpeI
 +
*Well 8 : 5µL of BBa_K1155005 digested by EcoRI/SpeI
 +
*Well 9 : 5µL of BBa_K1155004 digested by EcoRI/SpeI
 +
*Gel : 1%
 +
|}
 +
 +
Expected sizes :
 +
 +
*PSB1C33 : 2070kb
 +
*NarK, NarG, NirB : 200kb
 +
*Pfnr :
=====3 - Electrophoresis of the digestion of Bba_K11550007 and Bba_K1155003 by XBaI and PstI=====
=====3 - Electrophoresis of the digestion of Bba_K11550007 and Bba_K1155003 by XBaI and PstI=====

Revision as of 22:45, 19 August 2013

Contents

Notebook : August 14

Lab work

A - Aerobic/Anaerobic regulation system

Objective : obtaining ...

1 - Electrophoresis to check the digestion of Bba_K1155004,Bba_K1155005, Bba_K1155006 by EcoRI and SpeI

Anaïs, Nadia

PSgel2 1408.jpg
  • Well 1 : 6µL DNA Ladder
  • Well 2 : 5µL of BBa_K1155006 digested by EcoRI/SpeI
  • Well 3 : 5µL of BBa_K1155005 digested by EcoRI/SpeI
  • Well 4 : 5µL of BBa_K1155004 digested by EcoRI/SpeI
  • Gel : 1%

Expected sizes :

  • PSB1C33 : 2070kb
  • NarK, NarG, NirB : 200kb
 We obtained fragments of the right size but in very few quantity. We do it again but this time we will use more quantity of enzymes AND ADN ?!
2 - Digestion of Bba_K1155000, Bba_K1155004,Bba_K1155005, Bba_K1155006 by SpeI and EcoRI/SpeI

Anaïs, Nadia

  • Digestion by SpeI :
    • Buffer : 2µL
    • SpeI : 2µL
    • ADN : 15µL
    • H20 : 1µL
  • Digestion by EcoRI and SpeI :
    • Buffer : 3µL
    • SpeI : 2µL
    • EcoRI : 2µL
    • ADN : 20µL
    • H20 : 3µL

3 - Electrophoresis to check the digestion of Bba_K1155000, Bba_K1155004,Bba_K1155005, Bba_K1155006 by SpeI and EcoRI/SpeI=

Anaïs, Nadia

[[]]
  • Well 1 : 5µL of BBa_K1155000 digested by SpeI
  • Well 2 : 5µL of BBa_K1155006 digested by SpeI
  • Well 3 : 5µL of BBa_K1155005 digested by SpeI
  • Well 4 : 5µL of BBa_K1155004 digested by SpeI
  • Well 5 : 6µL DNA Ladder
  • Well 6 : 5µL of BBa_K1155000 digested by EcoRI/SpeI
  • Well 7 : 5µL of BBa_K1155006 digested by EcoRI/SpeI
  • Well 8 : 5µL of BBa_K1155005 digested by EcoRI/SpeI
  • Well 9 : 5µL of BBa_K1155004 digested by EcoRI/SpeI
  • Gel : 1%

Expected sizes :

  • PSB1C33 : 2070kb
  • NarK, NarG, NirB : 200kb
  • Pfnr :
3 - Electrophoresis of the digestion of Bba_K11550007 and Bba_K1155003 by XBaI and PstI

Nadia

PSgel1 1408.jpg
  • Well 1 : 6µL DNA Ladder
  • Well 2 : 25µL of BBa_K115503 digested by XBaI/PstII
  • Well 3 : 25µL of BBa_K1155003 digested by XBaI/PstII
  • Well 4 : 25µL of BBa_K1155007 digested by XBaI/PstII
  • Well 5 : 25µL of BBa_K1155007 digested by XBaI/PstII
  • Gel : 1%