Team:TU-Munich/Results/Moss

From 2013.igem.org

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(Determination of growth rates for different liquid culture forms)
(Determination of growth rates for different liquid culture forms)
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In our approaches we tested mainly the influence of mixing and coupled to this of aeration on the growth of moss. For this purpose 500 mL flasks containing 250 mL Knob media were inoculated with 50 mL moss suspension which had been disrupted 24 h ago (corresponding a moss concentration of 130 mg dry mass per liter). In triplicates the growth conditions in standing, shaken and aerated flasks were determined for 9 days at room temperature and a normal dark/light rhythm (8/16h).
In our approaches we tested mainly the influence of mixing and coupled to this of aeration on the growth of moss. For this purpose 500 mL flasks containing 250 mL Knob media were inoculated with 50 mL moss suspension which had been disrupted 24 h ago (corresponding a moss concentration of 130 mg dry mass per liter). In triplicates the growth conditions in standing, shaken and aerated flasks were determined for 9 days at room temperature and a normal dark/light rhythm (8/16h).
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[[File:TUM_13__growth_conditions.png|thumb|left|400px| '''Figure 2:''' Determination of different growth conditions for wild type moss]]
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[[File:TUM13_growth_liquid_culture.png|thumb|left|400px| '''Figure 2:''' Determination of different growth conditions for wild type moss]]
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[[File:TUM13_growth_liquid_culture.png|thumb|right|500px| '''Figure 2:''' Determination of different growth conditions for wild type moss]]
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[[File:TUM_13__growth_conditions.png|thumb|right|400px| '''Figure 2:''' Determination of different growth conditions for wild type moss]]
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==Tolerance to relevant environmental pollutants and toxins==
==Tolerance to relevant environmental pollutants and toxins==

Revision as of 18:37, 4 October 2013


Growing Physcomitrella patens on solid materials

For implementation of the PhyscoFilter it is elementary to know about the mosses growth behavior on different surfaces. We therefore tried 5 different materials and came to the conclusion that the moss grows very well on all of them, but especially felt material would suit our plans for implementing the filter system in form of a remediation raft since the moss can easily cling to the fibers, which are also dense enough to prevent the moss from being washed away. Also the spongy properties of felt make it an ideal surface for the plant as it ensures a constant supply of water. The second best material is probably agar or metal grid on agar, but this has the disadvantage of being washed away gradually.

Determination of growth rates for different liquid culture forms

In parallel to the determination of growth conditions for solid materials we examined different growth conditions in liquid culture, too. In general the handling of liquid cultures of moss is more easy than the one of those growing on solid media as the moss can be disrupted mechanically with an Ultra-Turrax. That way homogenized cultures can be achieved very comfortably. Moreover the growth of moss in liquid suspension cultures provides an improved and constant nourishment of cells without any nutrition gradients and continuously pH adjusted. Even if the up scaling process up to volumes of around 20 L in standard stirred tank bioreactors is more convenient at a first glance, the further up scaling process is often limited by an insufficient light input resulting in suboptimal growth rates. This is physically determined as the volume increases in the third potency whereas the surface only increases in the second potency. Therefore larger suspension volumes require different and often technically more challenging bioreactor forms as tube reactors, plate or wave reactors. In our approaches we tested mainly the influence of mixing and coupled to this of aeration on the growth of moss. For this purpose 500 mL flasks containing 250 mL Knob media were inoculated with 50 mL moss suspension which had been disrupted 24 h ago (corresponding a moss concentration of 130 mg dry mass per liter). In triplicates the growth conditions in standing, shaken and aerated flasks were determined for 9 days at room temperature and a normal dark/light rhythm (8/16h).

Figure 2: Determination of different growth conditions for wild type moss
Figure 2: Determination of different growth conditions for wild type moss

Tolerance to relevant environmental pollutants and toxins

To test whether and how the moss reacts to toxins and pollutants, which can occur in waste and surface water and which our PhyscoFilter should remove, wild type plants were incubated in serial dilutions of the toxic substances. As a negative control distilled water was used. After 4, 7, 10 and 19 days the plants were screened with a light microscope, where one could easily differentiate between alive and dead plants. The latter occurred in two different phenotypes, one appearing transparent (dead moss 1) because it lost its chlorophyll, the other black (dead moss 2).

Figure 1: Toxicity assay for wild type moss
Table 1: Typical concentrations of toxic substances
Substance Application Concentration
Ampicillin Antibiotic agar plate 0.1 g/L[http://www.eeescience.utoledo.edu/Faculty/Sigler/Von_Sigler/LEPR_Protocols_files/Working%20concentrations%20and%20stock%20solutions.pdf[1]]
Chloramphenicol Antibiotic agar plate 0.025 g/L[http://www.eeescience.utoledo.edu/Faculty/Sigler/Von_Sigler/LEPR_Protocols_files/Working%20concentrations%20and%20stock%20solutions.pdf[1]]
Kanamycin Antibiotic agar plate 0.05 g/L[http://www.eeescience.utoledo.edu/Faculty/Sigler/Von_Sigler/LEPR_Protocols_files/Working%20concentrations%20and%20stock%20solutions.pdf[1]]
Tetracycline Antibiotic agar plate 0.01 g/L[http://www.eeescience.utoledo.edu/Faculty/Sigler/Von_Sigler/LEPR_Protocols_files/Working%20concentrations%20and%20stock%20solutions.pdf[1]]
Geneticin (G418) Antibiotic agar plate (for moss selection) 12.5 mg/L[http://www.plant-biotech.net[2]]
Diclofenac 1 tablet (25-50 mg) dissolved in 6 L (blood circuit) 4.2-8.3 mg/L
NaCl Sea water 3.5 g/L
Catechol Death of Arabidopsis 55 mg/L[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1586047/[3]]
Erythromycin 1 tablet (500 mg) dissolved in 6 L (blood circuit) 0.08 g/L

The result of this toxicity assay is, that wild type plants are not negatively affected by waste water treatment plant (WWTP) effluents, which were sampled from the local WWTPs Großlappen (waste water 1) and Garching (waste water 2). So the filter system could work effectively placed in the effluent stream of WWTPs or on surface water. However, sea water seems to influence the vitality of the moss, so the implementation of the PhyscoFilter in salt water is not recommended. Furthermore we can conclude that substances the genetically modified moss should degrade (Erythromycin, Catechol) or accumulate (Diclofenac) only affect the plant - if they do at all - at concentrations much higher than they occur naturally (see table 1). Also the assay indicates that it is possible to grow the plant on agar plates with often used antibiotics (Tetracycline, Ampicillin, Chloramphenicol, Kanamycin), since the working concentration has no influence on the moss. This can be very useful to prevent bacterial contamination of plates. As expected G418 shows toxic influence on wild type moss and can therefore be used as selection substance for transformed plants, though it takes a few days to take effect.

References:

http://www.eeescience.utoledo.edu/Faculty/Sigler/Von_Sigler/LEPR_Protocols_files/Working concentrations and stock solutions.pdf University of Toledo, Department of Environmental Sciences
http://www.plant-biotech.net plant-biotech.net
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1586047/ Liao,Y. et al, 2006 Liao,Y. et al, (2006). The Key Role of Chlorocatechol 1,2-Dioxygenase in Phytoremoval and Degradation of Catechol by Transgenic Arabidopsis. Plant Physiology, 142(2): 620–628.