Team:USTC CHINA/Notebook/Protocols/Colony PCR
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Colony PCR
Performed with Thermo Scientific Taq DNA Polymerase (recombinant), 5U/μl
Volume (μl) | |
10×Taq Buffer | 5 |
dNTP Mix, 2 mM each | 5 (0.2 mM of each) |
Forward primer | 0.1-1.0 μM |
Reverse primer | 0.1-1.0 μM |
25 mM MgCl2* | 1-4 mM |
Template DNA | Picked from the colony after transformation |
Taq DNA Polymerase | 0.25 U |
ddH2O | To 10 |
Total | 10 |
Final concentration of MgCl2(mM) | 1 | 1.5 | 2 | 2.5 | 3 | 4 |
Volume of 25 mM MgCl2 to be added for 10 μl reaction(μl) | 0.4 | 0.6 | 0.8 | 1.0 | 1.2 | 1.6 |
Step | Temperature, °C | Time | Number of cycles |
Initial denaturation | 95 | 10 min | 1 |
Denaturation | 95 | 30s | 25~40 |
Annealing | Tm-5 | 30s | 25~40 |
Extension | 72 | 1 min/kb | 25~40 |
Final Extension | 72 | 5-15 min | 1 |
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