Team:Calgary/Notebook/Protocols/GelExtraction
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<li>Remove H<sub>2</sub>O</li> | <li>Remove H<sub>2</sub>O</li> | ||
<li>Add equal amounts of H2O and Binding Buffer (XP2) to the gel</li> | <li>Add equal amounts of H2O and Binding Buffer (XP2) to the gel</li> | ||
- | <li>Incubate mixture at | + | <li>Incubate mixture at 55°C for 7 mins</li> |
<li>Mix with vortex for 2 mins</li> | <li>Mix with vortex for 2 mins</li> | ||
<li>Place in the HiBind DNA Mini Column in the 2 mL tube</li> | <li>Place in the HiBind DNA Mini Column in the 2 mL tube</li> | ||
Line 32: | Line 32: | ||
<li>Wash the column with 700 µL of SPW buffer with added ethanol and spin down at 10,000xg for 1 min</li> | <li>Wash the column with 700 µL of SPW buffer with added ethanol and spin down at 10,000xg for 1 min</li> | ||
<li>Discard liquid</li> | <li>Discard liquid</li> | ||
- | <li>Wash the column with 700 | + | <li>Wash the column with 700 µL of SPW buffer again and spin down at 10,000xg for 1 min</li> |
<li>Discard the liquid</li> | <li>Discard the liquid</li> | ||
<li>Spin down the column at 13,000xg for 1 min to dry the column</li> | <li>Spin down the column at 13,000xg for 1 min to dry the column</li> |
Latest revision as of 00:18, 28 September 2013
Gel Extraction
Gel Extraction
This protocol is utilized in accordance to the manufacturer's protocol from Omega E.Z.N.A (EaZy Nucleic Acid Isolation)
Reagents and Materials
- Omega E.Z.N.A (EaZy Nucleic Acid Isolation) kit
- Agarose gel
- Blade
Protocol
- Place gel on the UV box
- Carefully extract the fragment suspended in the gel
- Mass gel fragments
- Place fragment into a 1.5 mL tube and add 4 µL of H2O
- Volume of water added to volume of gel is 200% however if fragment it small 1 mL of water will suffice
- Remove H2O
- Add equal amounts of H2O and Binding Buffer (XP2) to the gel
- Incubate mixture at 55°C for 7 mins
- Mix with vortex for 2 mins
- Place in the HiBind DNA Mini Column in the 2 mL tube
- Add 700 µL at 10,000xg for 1 min
- Discard liquid
- Add 300 µL Binding Buffer (XP2) into the HiBind DNA Mini Column and spin down at 10,000xg for 1 min
- Discard liquid
- Wash the column with 700 µL of SPW buffer with added ethanol and spin down at 10,000xg for 1 min
- Discard liquid
- Wash the column with 700 µL of SPW buffer again and spin down at 10,000xg for 1 min
- Discard the liquid
- Spin down the column at 13,000xg for 1 min to dry the column
- Elute in 50 µL of H2O and wait 1 min
- Spin down the column at 13,000xg for 1 min to dry the column
- Use a spectrophotometer to measure the concentration and the purity of your plasmid