Team:Uppsala/chromoproteins

From 2013.igem.org

(Difference between revisions)
 
(25 intermediate revisions not shown)
Line 13: Line 13:
</style>
</style>
 +
 +
<script type="text/javascript">
 +
/*Acts once the document is loaded*/ $(document).ready(function() { /*Move the tn-main-wrap as child of <body>*/ $("#tn-main-wrap-wrap").prependTo($("body")); /*Move the menubars in the tn-main-wrap*/ $("#menubar.left-menu").appendTo($("#tn-main-wrap")); $("#menubar.right-menu").appendTo($("#tn-main-wrap"));
 +
/*Spoiler JS*/ $(".tn-spoiler div").slideUp(); $(".tn-spoiler a").click(function(e) { e.preventDefault(); $(".tn-spoiler-active").removeClass("tn-spoiler-active"); $(this).parent().addClass("tn-spoiler-active"); $(".tn-spoiler").not(".tn-spoiler-active").children("div").slideUp(); $(".tn-spoiler-active").children("div").slideToggle(); });
 +
/*Add favicon*/ $("link[rel='shortcut icon']").remove(); $("head").append("<link rel='shortcut icon' type='image/png' href='https://static.igem.org/mediawiki/2013/6/6d/Uppsalas-cow-con.png'>"); });
 +
</script>
 +
 +
<link href="https://2013.igem.org/Team:Uppsala/lightbox-css-code.css?action=raw&ctype=text/css" type="text/css" rel="stylesheet">
 +
 +
<script src="https://2013.igem.org/Team:Uppsala/jquery-code.js?action=raw&ctype=text/javascript" type="text/javascript"></script>
 +
 +
<script src="https://2013.igem.org/Team:Uppsala/lightbox-code.js?action=raw&ctype=text/javascript" type="text/javascript"></script>
</head>
</head>
Line 27: Line 39:
<!-- Contains sub-logo picture -->
<!-- Contains sub-logo picture -->
-
<div id="igem_logo"><a href="https://2013.igem.org/Main_Page"><img class="igem_logo" src="https://static.igem.org/mediawiki/2013/5/59/IGEMlogo.png"></a></div>
+
<div id="igem_logo"><a href="https://2013.igem.org/Team:Uppsala"><img class="igem_logo" src="https://static.igem.org/mediawiki/2013/e/e0/Uppsala2013_IGEMlogo.png"></a></div>
-
<div id="igem"><a href="https://2013.igem.org/Main_Page"><img class="igem" src="https://static.igem.org/mediawiki/2013/9/9c/Uppsala_IGEM_log_blue.png"></a></div>
+
<div id="igem"><a href="https://2013.igem.org/Main_Page"><img class="igem" src="https://static.igem.org/mediawiki/2013/b/b8/Uppsala2013_Uppsala_IGEM_log_blue.png"></a></div>
 +
 
 +
<img class="slogan" src="https://static.igem.org/mediawiki/2013/a/ad/Uppsala2013_Header.png">
</div>  
</div>  
Line 44: Line 58:
<li><a href="https://2013.igem.org/Team:Uppsala/project" id="list_type1"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/a/aa/Uppsala2013_Project.png"></a>
<li><a href="https://2013.igem.org/Team:Uppsala/project" id="list_type1"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/a/aa/Uppsala2013_Project.png"></a>
<ul>
<ul>
-
<li><a href="https://2013.igem.org/Team:Uppsala/overview">Overview</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/chassi">Chassi</a>
<li><a href="https://2013.igem.org/Team:Uppsala/chassi">Chassi</a>
<ul>
<ul>
Line 50: Line 64:
<li><a href="https://2013.igem.org/Team:Uppsala/promoters">Promoters</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/promoters">Promoters</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/reporter-genes">Reporter genes</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/reporter-genes">Reporter genes</a></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/affinity-tags">Toxin-antitoxin system</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/toxin-antitoxin-system">Toxin-antitoxin system</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/vectors">Vectors</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/vectors">Vectors</a></li>
                                                                 <li><a href="https://2013.igem.org/Team:Uppsala/signal-peptide">Signal peptide</a></li>
                                                                 <li><a href="https://2013.igem.org/Team:Uppsala/signal-peptide">Signal peptide</a></li>
Line 57: Line 71:
                                                 <li><a href="https://2013.igem.org/Team:Uppsala/metabolic-engineering">Metabolic engineering</a>
                                                 <li><a href="https://2013.igem.org/Team:Uppsala/metabolic-engineering">Metabolic engineering</a>
                                                     <ul>
                                                     <ul>
-
                                                                 <li><a href="https://2013.igem.org/Team:Uppsala/p-coumaric-acid">P-coumaric acid</a></li>
+
                                                                 <li><a href="https://2013.igem.org/Team:Uppsala/p-coumaric-acid">p-Coumaric acid</a></li>
                                                                 <li><a href="https://2013.igem.org/Team:Uppsala/resveratrol">Resveratrol</a></li>
                                                                 <li><a href="https://2013.igem.org/Team:Uppsala/resveratrol">Resveratrol</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/lycopene">Lycopene</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/lycopene">Lycopene</a></li>
Line 63: Line 77:
                                                                 <li><a  
                                                                 <li><a  
href="https://2013.igem.org/Team:Uppsala/saffron">Saffron</a></li>
href="https://2013.igem.org/Team:Uppsala/saffron">Saffron</a></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/astraxantin">Astaxanthin</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/astaxanthin">Astaxanthin</a></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/zeaxantin">Zeaxanthin</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/zeaxanthin">Zeaxanthin</a></li>
</ul></li>
</ul></li>
</li>  
</li>  
Line 70: Line 84:
href="https://2013.igem.org/Team:Uppsala/miraculin">Miraculin</a></li>
href="https://2013.igem.org/Team:Uppsala/miraculin">Miraculin</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/chromoproteins">Chromoproteins</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/chromoproteins">Chromoproteins</a></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/safety">Safety experiment</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/safety-experiment">Safety experiment</a></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/result">Result</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/results">Results</a></li>
Line 78: Line 92:
<li><a href="https://2013.igem.org/Team:Uppsala/modeling" id="list_type1"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/6/63/Uppsala2013_Modeling.png"></a>
<li><a href="https://2013.igem.org/Team:Uppsala/modeling" id="list_type1"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/6/63/Uppsala2013_Modeling.png"></a>
<ul>
<ul>
-
<li><a href="https://2013.igem.org/Team:Uppsala/resveratrol-pathway">Resveratrol pathway </a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/P-Coumaric-acid-pathway">Kinetic model</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/modeling-tutorial">Modeling tutorial </a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/modeling-tutorial">Modeling tutorial </a></li>
 +
 +
<li><a href="https://2013.igem.org/Team:Uppsala/toxicity-model">Toxicity model</a></li>
</ul></li>
</ul></li>
<li><a href="https://2013.igem.org/Team:Uppsala/parts" id="list_type2"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/e/eb/Uppsala2013_parts.png"></a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/parts" id="list_type2"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/e/eb/Uppsala2013_parts.png"></a></li>
Line 88: Line 104:
<li><a href="https://2013.igem.org/Team:Uppsala/carotenoid-group">Carotenoid group</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/carotenoid-group">Carotenoid group</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/chassi-group">Chassi group</a></li>
<li><a href="https://2013.igem.org/Team:Uppsala/chassi-group">Chassi group</a></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/advisors">Advisors</a></li>
+
                                                <li><a href="https://2013.igem.org/Team:Uppsala/advisors">Advisors</a></li>
 +
</ul></li>
</ul></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/hp" id="list_type3"><img class="nav-text"      src="https://static.igem.org/mediawiki/2013/b/b8/Uppsala2013_HP.png"></a>
+
<li><a href="https://2013.igem.org/Team:Uppsala/human-practice" id="list_type3"><img class="nav-text"      src="https://static.igem.org/mediawiki/2013/b/b8/Uppsala2013_HP.png"></a>
<ul>
<ul>
-
<li><a href="https://2013.igem.org/Team:Uppsala/Yoghurtproducts">Yoghurt products</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/yoghurt">Yoghurt +</a></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/synbioday">SynBio day</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/synbioday">SynBioDay</a></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/safety">Bioethics and safety</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/biosafety-and-ethics">Biosafety and ethics</a></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/society">Society and outreach</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/public-opinion">Public opinion </a></li>
-
<li><a href="https://2013.igem.org/Team:Uppsala/highschool-outreach">High school outreach</a></li>
+
                                                <li><a href="https://2013.igem.org/Team:Uppsala/Outreach">High school & media </a></li>
-
                                                <li><a href="https://2013.igem.org/Team:Uppsala/outreach">Media outreach</a></li>
+
<li><a href="https://2013.igem.org/Team:Uppsala/bioart">BioArt</a></li>
 +
<li><a href="https://2013.igem.org/Team:Uppsala/LactonutritiousWorld">A LactoWorld</a></li>
 +
<li><a href="https://2013.igem.org/Team:Uppsala/killswitches">Killswitches</a></li>
 +
<li><a href="https://2013.igem.org/Team:Uppsala/realization">Patent</a></li>
</ul></li>
</ul></li>
<li><a href="https://2013.igem.org/Team:Uppsala/attribution" id="list_type4"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/5/5d/Uppsala2013_Attributions.png"></a></li>  
<li><a href="https://2013.igem.org/Team:Uppsala/attribution" id="list_type4"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/5/5d/Uppsala2013_Attributions.png"></a></li>  
<li><a href="https://2013.igem.org/Team:Uppsala/notebook" id="list_type3"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/3/36/Uppsala2013_Notebook.png"></a>
<li><a href="https://2013.igem.org/Team:Uppsala/notebook" id="list_type3"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/3/36/Uppsala2013_Notebook.png"></a>
                                     <ul>
                                     <ul>
-
                                         <li><a href="https://2013.igem.org/Team:Uppsala/protocol">Protocol</a></li>
+
                                         <li><a href="https://2013.igem.org/Team:Uppsala/safety-form">Safety form</a></li>
-
                                         <li><a href="https://2013.igem.org/Team:Uppsala/notebook">Lab journal</a></li>
+
                                         <li><a href="https://2013.igem.org/Team:Uppsala/protocols">Protocols</a></li>
                                     </ul></li>
                                     </ul></li>
</ul>
</ul>
Line 109: Line 129:
</div>
</div>
-
 
-
 
<div id="main_content"> <!-- Put content here -->
<div id="main_content"> <!-- Put content here -->
Line 117: Line 135:
<h1> Bringing color to the world of synthetic biology since 2011 </h1>
<h1> Bringing color to the world of synthetic biology since 2011 </h1>
-
<div id="chromoprotein_world"> <img class="chromoprotein_world" src="https://static.igem.org/mediawiki/2013/8/8d/Uppsala2013_Kromokarta.png"> </div>  
+
<div id="chromoprotein_world"> <a href="https://static.igem.org/mediawiki/2013/8/8d/Uppsala2013_Kromokarta.png" data-lightbox="roadtrip"><img class="chromoprotein_world" src="https://static.igem.org/mediawiki/2013/8/8d/Uppsala2013_Kromokarta.png"></a> </div>  
 +
 
 +
<br>
 +
 
 +
Something we have come to realise is that sometimes the most useful parts are also the simplest. IGEM Uppsala first began synthesising several chromoproteins from sea anemones and corals back in 2011 and transforming them into E. coli. The result was the growth of strikingly colourful bacterial colonies. Work on the chromoproteins continued during the 2012 project, however because of a mix up nothing was sent to the registry.
<br>
<br>
<br>
<br>
-
Something we have come to realise is that sometimes the most useful parts are also the simplest. IGEM Uppsala first began synthesising several chromo proteins from sea anemones and corals back in 2011 and transforming them into E. coli. The result was the growth of strikingly colourful bacterial colonies. This was expanded on during the 2012 project, however because of a mix up they were never sent to the registry.
+
Since then we have expanded the collection further and the interest in them has exploded. In this year alone around 10 teams have contacted us requesting our chromoproteins. They have been featured on the parts registry front page, published on the front cover of Nature reviews microbiology 10 year anniversary issue and been requested by NASA for possible future space applications.  
<br>
<br>
<br>
<br>
-
Since then the interest in them has exploded. In this year alone X teams have contacted us requesting our chromo proteins. They have been featured on the parts registry front page, published on the front cover of Nature reviews microbiology 10 year anniversary issue and been requested by NASA for possible future space applications.  
+
<div id="chromoprotein_n_reviews"> <a href="https://static.igem.org/mediawiki/2013/4/4b/Uppsala2013_Naturereviews.png" data-lightbox="roadtrip"><img class="chromoprotein_n_reviews" src="https://static.igem.org/mediawiki/2013/4/4b/Uppsala2013_Naturereviews.png"></a> </div>
-
<div id="chromoprotein_n_reviews"> <img class="chromoprotein_n_reviews" src="https://static.igem.org/mediawiki/2013/4/4b/Uppsala2013_Naturereviews.png"> </div>
+
<br>
 +
<br>
 +
 
 +
This is why iGEM Uppsala is proud to present our complete chromoprotein collection. We have sent the chromoproteins to the registry, assembled both with and without RBS and together with a range of popular promoters to make them as available and easy to use as possible. Our hope is that by providing a comprehensive list of different chromoproteins to the registry that others will be able to use them and continue to find new purposes for them. Below you can see some of our chromoproteins previewed.
<br>
<br>
<br>
<br>
-
This is why iGEM Uppsala is proud to present our complete chromo protein collection, sent into the registry with and without RBS and together with a range of popular promoters.
 
-
<div id="chromoprotein_all"> <img class="chromoprotein_all" src=""> </div>
+
<div id="chromoprotein_all"> <a href="https://static.igem.org/mediawiki/2013/3/36/Uppsala2013_chromoproteins.JPG" data-lightbox="roadtrip"><img class="chromoprotein_all" src="https://static.igem.org/mediawiki/2013/3/36/Uppsala2013_chromoproteins.JPG"></a></div>
 +
 
<br>
<br>
<br>
<br>
 +
<a id="l1"></a><h1> Complete chromoprotein collection </h1>
<a href="http://parts.igem.org/Part:BBa_K1033900">BBa_K1033900</a> - meffBlue, blue chromoprotein (incl RBS, J23110) <br>
<a href="http://parts.igem.org/Part:BBa_K1033900">BBa_K1033900</a> - meffBlue, blue chromoprotein (incl RBS, J23110) <br>
<a href="http://parts.igem.org/Part:BBa_K1033901">BBa_K1033901</a> - meffBlue, blue chromoprotein (incl RBS) <br>
<a href="http://parts.igem.org/Part:BBa_K1033901">BBa_K1033901</a> - meffBlue, blue chromoprotein (incl RBS) <br>
Line 179: Line 205:
<div id="bottom-pic">
<div id="bottom-pic">
-
<img class="bottom-pic" src="https://static.igem.org/mediawiki/2013/a/aa/Bottom_picture.png">
+
</div>
</div>

Latest revision as of 15:56, 28 October 2013


Uppsala iGEM 2013

iGEM Uppsala chromoprotein collection

Bringing color to the world of synthetic biology since 2011


Something we have come to realise is that sometimes the most useful parts are also the simplest. IGEM Uppsala first began synthesising several chromoproteins from sea anemones and corals back in 2011 and transforming them into E. coli. The result was the growth of strikingly colourful bacterial colonies. Work on the chromoproteins continued during the 2012 project, however because of a mix up nothing was sent to the registry.

Since then we have expanded the collection further and the interest in them has exploded. In this year alone around 10 teams have contacted us requesting our chromoproteins. They have been featured on the parts registry front page, published on the front cover of Nature reviews microbiology 10 year anniversary issue and been requested by NASA for possible future space applications.



This is why iGEM Uppsala is proud to present our complete chromoprotein collection. We have sent the chromoproteins to the registry, assembled both with and without RBS and together with a range of popular promoters to make them as available and easy to use as possible. Our hope is that by providing a comprehensive list of different chromoproteins to the registry that others will be able to use them and continue to find new purposes for them. Below you can see some of our chromoproteins previewed.



Complete chromoprotein collection

BBa_K1033900 - meffBlue, blue chromoprotein (incl RBS, J23110)
BBa_K1033901 - meffBlue, blue chromoprotein (incl RBS)
BBa_K1033902 - meffBlue, blue chromoprotein
BBa_K1033903 - tsPurple, purple chromoprotein (incl RBS, J23110)
BBa_K1033904 - tsPurple, purple chromoprotein (incl RBS, J23106)
BBa_K1033905 - tsPurple, purple chromoprotein (incl RBS)
BBa_K1033906 - tsPurple, purple chromoprotein
BBa_K1033907 - fwYellow, yellow chromoprotein (incl RBS, J23110)
BBa_K1033908 - fwYellow, yellow chromoprotein (incl RBS, J23106)
BBa_K1033909 - fwYellow, yellow chromoprotein (incl RBS)
BBa_K1033910 - fwYellow, yellow chromoprotein
BBa_K1033911 - scOrange, orange chromoprotein (incl RBS, J23110)
BBa_K1033912 - scOrange, orange chromoprotein (incl RBS, J23106)
BBa_K1033913 - scOrange, orange chromoprotein (incl. RBS)
BBa_K1033914 - amajLime, yellow-green chromoprotein (incl RBS & J23110)
BBa_K1033915 - amajLime, yellow-green chromoprotein (incl RBS)
BBa_K1033916 - amajLime, yellow-green chromoprotein
BBa_K1033917 - gfasPurple, purple chromoprotein (incl RBS, J23110)
BBa_K1033918 - gfasPurple, purple chromoprotein (incl RBS)
BBa_K1033919 - gfasPurple, purple chromoprotein
BBa_K1033920 - meffRed, red chromoprotein (incl RBS, J23110)
BBa_K1033921 - meffRed, red chromoprotein (incl RBS, J23106)
BBa_K1033922 - meffRed, red chromoprotein (incl RBS)
BBa_K1033923 - spisPink, pink chromoprotein (incl RBS, J23110)
BBa_K1033924 - spisPink, pink chromoprotein (incl RBS, J23106)
BBa_K1033925 - spisPink, pink chromoprotein (incl RBS)
BBa_K1033926 - asPink, pink chromoprotein (incl RBS, J23110)
BBa_K1033927 - asPink, pink chromoprotein (incl RBS)
BBa_K1033928 - aeBlue, blue chromoprotein (incl RBS, J23110)
BBa_K1033929 - aeBlue, blue chromoprotein (incl RBS)
BBa_K1033930 - amilCP, blue/purple chromoprotein (incl RBS)
BBa_K1033931 - amilGFP, yellow chromoprotein (incl RBS)

Retrieved from "http://2013.igem.org/Team:Uppsala/chromoproteins"