Team:Duke/Modeling/Codes
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== Codes == | == Codes == | ||
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+ | Thermodynamic Model | ||
+ | #[https://2013.igem.org/Team:Duke/Modeling/Codes/Thermo1 P_bound vs. Number of Binding Sites (MATLAB)]. <br> | ||
+ | #[https://2013.igem.org/Team:Duke/Modeling/Codes/Thermo2 P_bound vs. Binding Strengths (MATLAB)]. | ||
+ | <br><br> | ||
+ | Kinetic Model | ||
+ | #[https://2013.igem.org/Team:Duke/Modeling/Codes/Kinetic1 Bifurcation Region for Different Promoter Strengths (Mathematica)].<br> | ||
+ | #[https://2013.igem.org/Team:Duke/Modeling/Codes/Kinetic2 Bifurcation Region for Different Binding Strengths (Mathematica)].<br> | ||
+ | #[https://2013.igem.org/Team:Duke/Modeling/Codes/Kinetic3 Bifurcation Region for Different Leakiness (Mathematica)].<br> | ||
- | <br><br><br> | + | <br> |
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+ | ==Navigate== | ||
+ | ====Modeling Pages==== | ||
+ | #[https://2013.igem.org/Team:Duke/Modeling/Cooperativity '''Cooperativity and Hill Equation'''] | ||
+ | #[https://2013.igem.org/Team:Duke/Modeling/Thermodynamic_Model_Intro '''Thermodynamic Model: Introduction'''] | ||
+ | #[https://2013.igem.org/Team:Duke/Modeling/Thermodynamic_Model_Application '''Thermodynamic Model: Application'''] | ||
+ | #[https://2013.igem.org/Team:Duke/Modeling/Kinetic_Model '''Kinetic Model'''] | ||
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+ | ====Supplementary Materials==== | ||
+ | #[https://2013.igem.org/Team:Duke/Modeling/Thermo_Derivation '''Derivation of the Thermodynamic Model'''] | ||
+ | #MATLAB/Mathematica Codes Used (You are here) | ||
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+ | <br><br> | ||
</div> | </div> |
Latest revision as of 04:59, 24 September 2013
Contents |
Mathematical Modeling of Bistable Toggle Switch
Codes
Thermodynamic Model
Kinetic Model
- Bifurcation Region for Different Promoter Strengths (Mathematica).
- Bifurcation Region for Different Binding Strengths (Mathematica).
- Bifurcation Region for Different Leakiness (Mathematica).
Modeling Pages
- Cooperativity and Hill Equation
- Thermodynamic Model: Introduction
- Thermodynamic Model: Application
- Kinetic Model
Supplementary Materials
- Derivation of the Thermodynamic Model
- MATLAB/Mathematica Codes Used (You are here)