Team:Calgary/Notebook/References
From 2013.igem.org
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<h3>Detector</h3> | <h3>Detector</h3> | ||
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+ | <li>Boch, J., Scholze, H., Schornack, S., Landgraf, A., Hahn, S., Kay, S., … Bonas, U. (2009). Breaking the code of DNA binding specificity of TAL-type III effectors. <i>Science (New York, N.Y.), 326</i>(5959), 1509–12. doi:10.1126/science.1178811</li> | ||
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+ | <li>Bogdanove, A. J., Schornack, S., & Lahaye, T. (2010). TAL effectors: finding plant genes for disease and defense. <i>Current Opinion in Plant Biology, 13</i>(4), 394–401. doi:10.1016/j.pbi.2010.04.010</li> | ||
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+ | <li>Bogdanove, A. J., & Voytas, D. F. (2011). TAL effectors: customizable proteins for DNA targeting. <i>Science (New York, N.Y.), 333</i>6051), 1843–6. doi:10.1126/science.1204094</li> | ||
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+ | <li>Cong, L., Zhou, R., Kuo, Y., Cunniff, M., & Zhang, F. (2013). Comprehensive interrogation of natural TALE DNA-binding modules and transcriptional repressor domains. <i>Nature Communications</i>. doi:10.1038/ncomms1962.Comprehensive</li> | ||
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+ | <li>Meckler, J.F., Bhakta, M.S., Kim, M.S., Ovadia, R., Habrian, C.H., Zykovich, A., ... Baldwin, E.P. (2013). Quantitative analysis of TALE-DNA interactions suggests polarity effects. <i>Nucleic Acids Research</i>, 41(7), 4118–28. doi:10.1093/nar/gkt085</li> | ||
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+ | <li>Mussolino, C., & Cathomen, T. (2012). TALE nucleases: tailored genome engineering made easy. <i>Current Opinion in Biotechnology, 23</i>(5), 644–50. doi:10.1016/j.copbio.2012.01.013</li> | ||
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+ | <h3>Prussian Blue</h3> | ||
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+ | <li>Ford, A. G. C., Harrison, P. M., Rice, D. W., Smith, J. M. A., Treffry, A., White, J. L., & Yariv, J. (1984). Ferritin : design and formation of an iron-storage molecule source . <i>Philosophical Transactions of the Royal Society of London Series B, Biological Sciences</i>, 304(1121), 551-65. Retrieved from http://www.jstor.org/stable/2396121</li> | ||
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+ | <li>Harrison, P.-M., & Arosio, P. (1996). The ferritins: molecular properties, iron storage function and cellular regulation. <i>Biochimica et Biophysica Acta, 1275</i>(3), 161-203. doi:10.1016/0005-2728(96)00022-9</li> | ||
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+ | <li>Lawson, D. M., Artymiuk, P. J., Yewdall, S. J., Smith, J. M., Livingstone, J. C., Treffry, A., Luzzago, A., Levi, S., Arosio, P., Cesareni, G. (1991). Solving the structure of human H ferritin by genetically engineering intermolecular crystal contacts. <i>Nature, 349</i>(6309), 541–4. doi:10.1038/349541a0</li> | ||
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+ | <li>Zhang, W., Zhang, Y., Chen, Y., Li, S., Gu, N., Hu, S., Sun, Y., Chen, X., & Li, Q. (2013). Prussian blue modified ferritin as peroxidase mimetics and its applications in biological detection, <i>Journal of Nanoscience and Nanotechnology, 12</i>, 1–8. doi:10.1166/jnn.2012.6871</li> | ||
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+ | <li>Zhang, X.-Q., Gong, S.-W., Zhang, Y., Yang, T., Wang, C.-Y., & Gu, N. (2010). Prussian blue modified iron oxide magnetic nanoparticles and their high peroxidase-like activity. <i>Journal of Materials Chemistry, 20</i>(24), 5110. doi:10.1039/c0jm00174k</li> | ||
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<li>Apostolovic, B., & Klok, H.-A. (2008). pH-sensitivity of the E3/K3 heterodimeric coiled coil. <i>Biomacromolecules, 9</i>(11), 3173–80. doi:10.1021/bm800746e</li> | <li>Apostolovic, B., & Klok, H.-A. (2008). pH-sensitivity of the E3/K3 heterodimeric coiled coil. <i>Biomacromolecules, 9</i>(11), 3173–80. doi:10.1021/bm800746e</li> | ||
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<li>Blais, B.W., Gauthier, M., Descheênes, M., & Huszczynski G. (2012). Polyester cloth-based hybridization array system for identification of enterohemorrhagic <i>Escherichia coli</i> serogroups O26, O45, O103, O111, O121, O145, and O157. <i>Journal of Food Protection,</i> 75(9), 1691-7. doi: 10.4315/0362-028X.JFP-12-116</li> | <li>Blais, B.W., Gauthier, M., Descheênes, M., & Huszczynski G. (2012). Polyester cloth-based hybridization array system for identification of enterohemorrhagic <i>Escherichia coli</i> serogroups O26, O45, O103, O111, O121, O145, and O157. <i>Journal of Food Protection,</i> 75(9), 1691-7. doi: 10.4315/0362-028X.JFP-12-116</li> | ||
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<li>Bushart, S., Bradbury, D., Elder, G., Duffield, J., Pascual, I., & Ratcliffe, N. (2006). The development of magnetic molecules for the selective removal of contaminants. In <i>Waste Management Conference</i>. Tuczon, AZ. Retrieved from http://www.wmsym.org/archives/2006/pdfs/6190.pdf </li> | <li>Bushart, S., Bradbury, D., Elder, G., Duffield, J., Pascual, I., & Ratcliffe, N. (2006). The development of magnetic molecules for the selective removal of contaminants. In <i>Waste Management Conference</i>. Tuczon, AZ. Retrieved from http://www.wmsym.org/archives/2006/pdfs/6190.pdf </li> | ||
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<li>Chase-Topping, M., Gally, D., Low, C., Matthews, L., Woolhouse, M. (2008). Super-shedding and the link between human infection and livestock carriage of <i>Escherichia coli</i> O157. <i>Nature Reviews Microbiology</i>, 6(12):904-12. doi: 10.1038/nrmicro2029</li> | <li>Chase-Topping, M., Gally, D., Low, C., Matthews, L., Woolhouse, M. (2008). Super-shedding and the link between human infection and livestock carriage of <i>Escherichia coli</i> O157. <i>Nature Reviews Microbiology</i>, 6(12):904-12. doi: 10.1038/nrmicro2029</li> | ||
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<li>Cornish-Bowden, A. (2012). <i>Fundamentals of Enzyme Kinetics</i> (4th ed.). Weinheim, Germany: Wiley-Blackwell.</li> | <li>Cornish-Bowden, A. (2012). <i>Fundamentals of Enzyme Kinetics</i> (4th ed.). Weinheim, Germany: Wiley-Blackwell.</li> | ||
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<li>Feng, P., & Lampel, K.A. (1994). Genetic analysis of <i>uidA</i> expression in enterohaemorrhagic <i>Escherichia coli</i> serotype O157:H7. <i>Microbiology</i>, 140, 2101-2107.</li> | <li>Feng, P., & Lampel, K.A. (1994). Genetic analysis of <i>uidA</i> expression in enterohaemorrhagic <i>Escherichia coli</i> serotype O157:H7. <i>Microbiology</i>, 140, 2101-2107.</li> | ||
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<li>Fortin, N.Y., Mulchandani, A., & Chen, W. (2001). Use of real-time polymerase chain reaction and molecular beacons for the detection of <i>Escherichia coli</i> O157:H7. <i>Analytical Biochemistry</i> , 289(2), 281-8.</li> | <li>Fortin, N.Y., Mulchandani, A., & Chen, W. (2001). Use of real-time polymerase chain reaction and molecular beacons for the detection of <i>Escherichia coli</i> O157:H7. <i>Analytical Biochemistry</i> , 289(2), 281-8.</li> | ||
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<li>Gill, A., Martinez-Perez, A., McIIwham, S., & Blais, B. (2012). Development of a method for the detection of verotoxin-producing <i>Escherichia coli</i> in food. <i>Journal of Food Protection</i>, 75(5), 827-837.</li> | <li>Gill, A., Martinez-Perez, A., McIIwham, S., & Blais, B. (2012). Development of a method for the detection of verotoxin-producing <i>Escherichia coli</i> in food. <i>Journal of Food Protection</i>, 75(5), 827-837.</li> | ||
- | <li> | + | <li>Munro, H.N. (1990). Iron regulation of ferritin gene expression. <i>Journal of Cellular Biochemistry</i> 44(2), 107-115.</li> |
<li>He, Y., Zhang, S., Zhang, X., Baloda, M., Gurung, A. S., Xu, H., … Liu, G. (2011). Ultrasensitive nucleic acid biosensor based on enzyme-gold nanoparticle dual label and lateral flow strip biosensor.<i> Biosensors & Bioelectronics</i>, 26(5), 2018–24. doi:10.1016/j.bios.2010.08.079</li> | <li>He, Y., Zhang, S., Zhang, X., Baloda, M., Gurung, A. S., Xu, H., … Liu, G. (2011). Ultrasensitive nucleic acid biosensor based on enzyme-gold nanoparticle dual label and lateral flow strip biosensor.<i> Biosensors & Bioelectronics</i>, 26(5), 2018–24. doi:10.1016/j.bios.2010.08.079</li> | ||
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<li>Kong, Y., Yao, H., Ren, H., Subbian, S., Cirillo, S. L. G., Sacchettini, J. C., … Cirillo, J. D. (2010). Imaging tuberculosis with endogenous beta-lactamase reporter enzyme fluorescence in live mice. <i>Proceedings of the National Academy of Sciences of the United States of America, 107</i>(27), 12239–44. doi:10.1073/pnas.1000643107</li> | <li>Kong, Y., Yao, H., Ren, H., Subbian, S., Cirillo, S. L. G., Sacchettini, J. C., … Cirillo, J. D. (2010). Imaging tuberculosis with endogenous beta-lactamase reporter enzyme fluorescence in live mice. <i>Proceedings of the National Academy of Sciences of the United States of America, 107</i>(27), 12239–44. doi:10.1073/pnas.1000643107</li> | ||
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<li>Lee, J., Kim, S. W., Kim, Y. H., & Ahn, J. Y. (2002). Active human ferritin H/L-hybrid and sequence effect on folding efficiency in Escherichia coli. <i>Biochemical and Biophysical Research Communications</i>, 298(2), 225–9. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/12387819</li> | <li>Lee, J., Kim, S. W., Kim, Y. H., & Ahn, J. Y. (2002). Active human ferritin H/L-hybrid and sequence effect on folding efficiency in Escherichia coli. <i>Biochemical and Biophysical Research Communications</i>, 298(2), 225–9. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/12387819</li> | ||
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<li>Mercer, A.C., Gaj, T. Fuller, R.P., & Barbas, C.F. 3rd (2012). Chimeric TALE recombinases with programmable DNA sequence specificity. <i>Nucleic Acids Research</i>, 40(21), 11163-72. doi: 10.1093/nar/gks875</li> | <li>Mercer, A.C., Gaj, T. Fuller, R.P., & Barbas, C.F. 3rd (2012). Chimeric TALE recombinases with programmable DNA sequence specificity. <i>Nucleic Acids Research</i>, 40(21), 11163-72. doi: 10.1093/nar/gks875</li> | ||
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<li>Metelkin, E. A., Lebedeva, G. V., Goryanin, I. I., & Demin, O. V. (2009). A kinetic model of <i>Escherichia coli</i> β-galactosidase. <i>Biophysics</i>, 54(2), 156–162. doi:10.1134/S0006350909020067</li> | <li>Metelkin, E. A., Lebedeva, G. V., Goryanin, I. I., & Demin, O. V. (2009). A kinetic model of <i>Escherichia coli</i> β-galactosidase. <i>Biophysics</i>, 54(2), 156–162. doi:10.1134/S0006350909020067</li> | ||
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<li>Moore, J.T., Davis, S.T., & Dev, I.K. (1997). The development of beta-lactamase as a highly versatile genetic reporter for eukaryotic cells. <i>Analytical Biochemistry, 247</i>(2), 203–9. doi:10.1006/abio.1997.2092</li> | <li>Moore, J.T., Davis, S.T., & Dev, I.K. (1997). The development of beta-lactamase as a highly versatile genetic reporter for eukaryotic cells. <i>Analytical Biochemistry, 247</i>(2), 203–9. doi:10.1006/abio.1997.2092</li> | ||
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<li>Nakajima, Y., & Ohmiya, Y. (2010). Bioluminescence assays: multicolor luciferase assay, secreted luciferase assay and imaging luciferase assay. <i>Expert Opinion on Drug Discovery</i>, 5(9), 835–849. doi:10.1517/17460441.2010.506213</li> | <li>Nakajima, Y., & Ohmiya, Y. (2010). Bioluminescence assays: multicolor luciferase assay, secreted luciferase assay and imaging luciferase assay. <i>Expert Opinion on Drug Discovery</i>, 5(9), 835–849. doi:10.1517/17460441.2010.506213</li> | ||
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<li>Yoshitomi, K.J, Zapata, R. Jinneman, K.C., Weagant, S.D., & Fedio, W. (2012). Recovery of <i>E. coli</i> O157 strains after exposure to acidification at pH 2. <i> Letters in Applied Microbiology</i>, 54(6), 499-503. doi: 10.1111/j.1472-765X.2012.03250.x</li> | <li>Yoshitomi, K.J, Zapata, R. Jinneman, K.C., Weagant, S.D., & Fedio, W. (2012). Recovery of <i>E. coli</i> O157 strains after exposure to acidification at pH 2. <i> Letters in Applied Microbiology</i>, 54(6), 499-503. doi: 10.1111/j.1472-765X.2012.03250.x</li> | ||
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Revision as of 22:22, 28 October 2013