Team:TU-Munich/Project/Physcomitrella

From 2013.igem.org

Revision as of 13:47, 14 July 2013 by Earthnut (Talk | contribs)


Physcomitrella - A model organism for Bryophytes

Text
Text
Figure 3:



A new chassis for iGEM, including several advantages

Text
Text
figure




Working with Physcomitrella

Text
Text
figure



Transformation, Genome Integration and Selection

Text
Text
figure



BioBricks for Proteinexpression in Physcomitrella

Text
Text
figure





A synthetic receptor for the Moss

Text

SERK: The Template from P. patens

Text
figure

The Blueprint for our Synthetic Moss Receptor

Text
figure



References:

http://www.ncbi.nlm.nih.gov/pubmed/6327079 Edens et al., 1984

  1. http://www.ncbi.nlm.nih.gov/pubmed/6327079 Edens et al., 1984 Edens, L., Bom, I., Ledeboer, A. M., Maat, J., Toonen, M. Y., Visser, C., and Verrips, C. T. (1984). Synthesis and processing of the plant protein thaumatin in yeast. Cell, 37(2):629–33.



$(document).ready(function(){


// put the footer in the right place

$("#footer-box").prepend($("#social-footer"));


// implement image preloading

var images = new Array()

function preload() { 

   for (i = 0; i < preload.arguments.length; i++) {
       images[i] = new Image()
       images[i].src = preload.arguments[i]
   }

}


// preload menu backgrounds

preload( "TUM13_menu-highlight.png", 

        "TUM13_submenu-bg.png",
        "TUM13_submenu-highlight.png",
        "TUM13_tour-start-highlight.png",
        "TUM13_tour-previous-highlight.png",
        "TUM13_tour-next-highlight.png" );

// preload team pictures

if ( $("div#teamfield").length > 0 ) { preload( "TUM13_raven-front.png", 

        "TUM13_raven-top.png",
        "TUM13_raven-top-left.png",
        "TUM13_raven-left.png",
        "TUM13_raven-bottom-left.png",
        "TUM13_raven-bottom.png",
        "TUM13_raven-bottom-right.png",
        "TUM13_raven-right.png",
        "TUM13_raven-top-right.png",
        "TUM13_katrin-front.png",        // Katrin
        "TUM13_katrin-t.png",
        "TUM13_katrin-t-l.png",
        "TUM13_katrin-l.png",
        "TUM13_katrin-b-l.png",
        "TUM13_katrin-b.png",
        "TUM13_katrin-b-r.png",
        "TUM13_katrin-r.png",
        "TUM13_katrin-t-r.png",
        "TUM13_rosario-front.png",        // Rosario
        "TUM13_rosario-t.png",
        "TUM13_rosario-t-l.png",
        "TUM13_rosario-l.png",
        "TUM13_rosario-b-l.png",
        "TUM13_rosario-b.png",
        "TUM13_rosario-b-r.png",
        "TUM13_rosario-r.png",
        "TUM13_rosario-t-r.png",
        "TUM13_fabian-front.png",        // Fabian
        "TUM13_fabian-t.png",
        "TUM13_fabian-t-l.png",
        "TUM13_fabian-l.png",
        "TUM13_fabian-b-l.png",
        "TUM13_fabian-b.png",
        "TUM13_fabian-b-r.png",
        "TUM13_fabian-r.png",
        "TUM13_fabian-t-r.png",
        "TUM13_andreas-front.png",        // Andreas
        "TUM13_andreas-t.png",
        "TUM13_andreas-t-l.png",
        "TUM13_andreas-l.png",
        "TUM13_andreas-b-l.png",
        "TUM13_andreas-b.png",
        "TUM13_andreas-b-r.png",
        "TUM13_andreas-r.png",
        "TUM13_andreas-t-r.png",
        "TUM13_louise-front.png",        // Louise
        "TUM13_louise-t.png",
        "TUM13_louise-t-l.png",
        "TUM13_louise-l.png",
        "TUM13_louise-b-l.png",
        "TUM13_louise-b.png",
        "TUM13_louise-b-r.png",
        "TUM13_louise-r.png",
        "TUM13_louise-t-r.png",
        "TUM13_johanna-front.png",        // Johanna
        "TUM13_johanna-t.png",
        "TUM13_johanna-t-l.png",
        "TUM13_johanna-l.png",
        "TUM13_johanna-b-l.png",
        "TUM13_johanna-b.png",
        "TUM13_johanna-b-r.png",
        "TUM13_johanna-r.png",
        "TUM13_johanna-t-r.png",
        "TUM13_meike-front.png",        // Meike
        "TUM13_meike-t.png",
        "TUM13_meike-t-l.png",
        "TUM13_meike-l.png",
        "TUM13_meike-b-l.png",
        "TUM13_meike-b.png",
        "TUM13_meike-b-r.png",
        "TUM13_meike-r.png",
        "TUM13_meike-t-r.png",
        "TUM13_volker-front.png",        // Volker
        "TUM13_volker-t.png",
        "TUM13_volker-t-l.png",
        "TUM13_volker-l.png",
        "TUM13_volker-b-l.png",
        "TUM13_volker-b.png",
        "TUM13_volker-b-r.png",
        "TUM13_volker-r.png",
        "TUM13_volker-t-r.png",
        "TUM13_polte-front.png",        // Polte
        "TUM13_polte-t.png",
        "TUM13_polte-t-l.png",
        "TUM13_polte-l.png",
        "TUM13_polte-b-l.png",
        "TUM13_polte-b.png",
        "TUM13_polte-b-r.png",
        "TUM13_polte-r.png",
        "TUM13_polte-t-r.png",
        "TUM13_leonie-front.png",        // Leonie
        "TUM13_leonie-t.png",
        "TUM13_leonie-t-l.png",
        "TUM13_leonie-l.png",
        "TUM13_leonie-b-l.png",
        "TUM13_leonie-b.png",
        "TUM13_leonie-b-r.png",
        "TUM13_leonie-r.png",
        "TUM13_leonie-t-r.png",
        "TUM13_philipp-front.png",        // Philipp
        "TUM13_philipp-t.png",
        "TUM13_philipp-t-l.png",
        "TUM13_philipp-l.png",
        "TUM13_philipp-b-l.png",
        "TUM13_philipp-b.png",
        "TUM13_philipp-b-r.png",
        "TUM13_philipp-r.png",
        "TUM13_philipp-t-r.png",
        "TUM13_jeff-front.png",        // Jeff
        "TUM13_jeff-t.png",
        "TUM13_jeff-t-l.png",
        "TUM13_jeff-l.png",
        "TUM13_jeff-b-l.png",
        "TUM13_jeff-b.png",
        "TUM13_jeff-b-r.png",
        "TUM13_jeff-r.png",
        "TUM13_jeff-t-r.png",
        "TUM13_chris-front.png",        // Chris
        "TUM13_chris-t.png",
        "TUM13_chris-t-l.png",
        "TUM13_chris-l.png",
        "TUM13_chris-b-l.png",
        "TUM13_chris-b.png",
        "TUM13_chris-b-r.png",
        "TUM13_chris-r.png",
        "TUM13_chris-t-r.png",
        "TUM13_flo-front.png",        // Flo
        "TUM13_flo-t.png",
        "TUM13_flo-t-l.png",
        "TUM13_flo-l.png",
        "TUM13_flo-b-l.png",
        "TUM13_flo-b.png",
        "TUM13_flo-b-r.png",
        "TUM13_flo-r.png",
        "TUM13_flo-t-r.png" );

}

// Slideshows

$('.bxslider').bxSlider({ 

   responsive: false,
   auto: true,
   autoHover: true

});

$('.bxgallery').bxSlider({ 

   slideMargin: 10,
   minSlides: 3,
   maxSlides: 3,
   moveSlides: 1,
   slideWidth: 5000

});

$("ul.bxgallery img").slimbox({ loop: true }, function(el) { url = el.src; url = url.substring(0, url.lastIndexOf('/')); url = url.replace('/thumb/', '/'); // description = $(el).parents("div.thumbinner").children("div.thumbcaption").text(); return [url, ]; }, function(el) { return (this == el) || (this.parentNode.parentNode && (this.parentNode.parentNode == el.parentNode.parentNode)); });


// Counter and Countdown

function render_counter(c) { i = 0; iid = window.setInterval(function(){ if ( (c-i) > (c/200) ) { $('span#counter').html(i); i += Math.round(c/200); } else { $('span#counter').html(c); window.clearInterval(iid); } }, 10); }

if ($('span#counter').length > 0) { $.ajax({ url: "https://2013.igem.org/Special:PopularPages", success: function( html ) { dom = $.parseHTML(html); visitors = $(dom).find('a[title="Team:TU-Munich"]').parent().text(); visitors = visitors.substring(visitors.indexOf('(')+1); visitors = visitors.substring(0, visitors.indexOf(' ')); visitors = visitors.replace(',', ); render_counter(visitors); }, error: function( xhr, status ) { render_counter(4700); } }); }

if ($('span#countdown) { clock = window.setInterval(function(){ jetzt = new Date(); time_left = Date.UTC(2013, 9, 5, 4, 0, 0) - Date.UTC(jetzt.getUTCFullYear(), jetzt.getUTCMonth(), jetzt.getUTCDate(), jetzt.getUTCHours(), jetzt.getUTCMinutes(), jetzt.getUTCSeconds()); left_sec = (time_left/1000)%60; left_sec = (left_sec < 10) ? "0" + left_sec : left_sec; left_min = Math.floor(time_left/60000)%60; left_min = (left_min < 10) ? "0" + left_min : left_min; left_h = Math.floor(time_left/3600000)%24; left_h = (left_h < 10) ? "0" + left_h : left_h; left_d = Math.floor(time_left/86400000); left_d = (left_d == 1) ? left_d + " day" : left_d + " days"; $('span#countdown').html(left_d + " " + left_h + ":" + left_min + ":" + left_sec); }, 1000); }

// Animate teamfield

if ( $("div#teamfield").length > 0 ) {

var $members = $("div#teamfield a");

$("body").mousemove(function(event){ for (i=0; i<$members.length; i++) {

if ( $members.eq(i).offset().left > event.pageX ) { 

   if ( $members.eq(i).offset().top > event.pageY ) {

       $members.eq(i).removeClass();
       $members.eq(i).addClass("top-left");

   } else if ( $members.eq(i).offset().top <= event.pageY && ( $members.eq(i).offset().top + $members.eq(i).height() ) >= event.pageY ) {

       $members.eq(i).removeClass();
       $members.eq(i).addClass("left");

   } else if ( ( $members.eq(i).offset().top + $members.eq(i).height() ) < event.pageY ) {

       $members.eq(i).removeClass();
       $members.eq(i).addClass("bottom-left");

   }

} else if ( $members.eq(i).offset().left <= event.pageX && ( $members.eq(i).offset().left + $members.eq(i).width() ) >= event.pageX ) { 

   if ( $members.eq(i).offset().top > event.pageY ) {

       $members.eq(i).removeClass();
       $members.eq(i).addClass("top");

   } else if ( $members.eq(i).offset().top <= event.pageY && ( $members.eq(i).offset().top + $members.eq(i).height() ) >= event.pageY ) {

       $members.eq(i).removeClass();
       $members.eq(i).addClass("front");

   } else if ( ( $members.eq(i).offset().top + $members.eq(i).height() ) < event.pageY ) {

       $members.eq(i).removeClass();
       $members.eq(i).addClass("bottom");

   }

} else if ( ( $members.eq(i).offset().left + $members.eq(i).width() ) < event.pageX ) { 

   if ( $members.eq(i).offset().top > event.pageY ) {

       $members.eq(i).removeClass();
       $members.eq(i).addClass("top-right");

   } else if ( $members.eq(i).offset().top <= event.pageY && ( $members.eq(i).offset().top + $members.eq(i).height() ) >= event.pageY ) {

       $members.eq(i).removeClass();
       $members.eq(i).addClass("right");

   } else if ( ( $members.eq(i).offset().top + $members.eq(i).height() ) < event.pageY ) {

       $members.eq(i).removeClass();
       $members.eq(i).addClass("bottom-right");

   }

}

} });

}

});

Retrieved from "http://2013.igem.org/Team:TU-Munich/Project/Physcomitrella"