Team:Bielefeld-Germany/Labjournal/Cultivation

From 2013.igem.org

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<br><b><u>M9 medium</u></b>
<br><b><u>M9 medium</u></b>
<p>For 1 L <b>M9 mineral medium</b> you need 867 mL sterile water <i>(for plates add 16 g Agar-Agar as well)</i>. Then add (in the following order:</p>
<p>For 1 L <b>M9 mineral medium</b> you need 867 mL sterile water <i>(for plates add 16 g Agar-Agar as well)</i>. Then add (in the following order:</p>
-
<p> - 300 µL 1 M CaCl2  
+
<p> - 300 µL 1 M CaCl2 </p>
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    <table border=1; style="margin-left:22px">
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</p>
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      <col width="150">
-
 
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      <col width="150">
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      <col width="100">
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<tr> <td align="center"><b>1 M CaCl2</b></td>  <td align="center">1 M CaCl2-H20</td>  <td align="center">14.70 g/100 mL</td> </tr>
 +
    </table>
<p> - 100 mL 5x M9 salt solution</p>  
<p> - 100 mL 5x M9 salt solution</p>  
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</table>
</table>
<br>
<br>
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<p> - 20 % glucose
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<p> - 20 % glucose</p>
     <table border=1; style="margin-left:22px">
     <table border=1; style="margin-left:22px">
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       <col width="150">
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<p>      For 500 mL stock solution add 100 g glucose to 440 mL water. Autoclave for 15 at 121° C</p>
<p>      For 500 mL stock solution add 100 g glucose to 440 mL water. Autoclave for 15 at 121° C</p>
<p> - 1 M MgSO4 </p>
<p> - 1 M MgSO4 </p>
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+
    <table border=1; style="margin-left:22px">
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      <col width="150">
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<tr> <td align="center"><b>MgSO4</b></td>  <td align="center">1 M MgSO4-7H20</td>  <td align="center">24.65 g/100 mL</td> </tr>
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    </table>
<p> - 1 mL biotin (1 mg/mL)</p>
<p> - 1 mL biotin (1 mg/mL)</p>
 +
    <table border=1; style="margin-left:22px">
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      <col width="150">
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      <col width="150">
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      <col width="100">
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<tr> <td align="center"><b>Biotin (1 mg/mL)</b></td>  <td align="center">biotin (1 mg/mL)</td>  <td align="center">50 mg/50 mL</td> </tr>
 +
    </table>
 +
<p>      For 50 mL stock solution dissolve 50 mg biotin in 45 mL water. Add water to a final volume of 50 mL. Sterilize the solution over a 0.22-µm filter. Prepare 1 mL aliquots and store at -20°.</p>
<p> - 1 mL thiamin (1 mg/mL)</p>
<p> - 1 mL thiamin (1 mg/mL)</p>
 +
    <table border=1; style="margin-left:22px">
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      <col width="150">
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      <col width="150">
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      <col width="100">
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<tr> <td align="center"><b>Thiamin (1 mg/mL)</b></td>  <td align="center">thiamin-HCl (1 mg/mL)</td>  <td align="center">50 mg/50 mL</td> </tr>
 +
    </table>
 +
<p>      For 50 mL stock solution dissolve 50 mg thiamin-HCl in 45 mL water. Add water to a final volume of 50 mL. Sterilize the solution over a 0.22-µm filter. Prepare 1 mL aliquots and store at -20°.</p>
<p> - 10 mL 100x trace elements solution <p>
<p> - 10 mL 100x trace elements solution <p>
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    <table border=0; style="margin-left:22px">
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      <col width="150">
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<tr> <td align="center"><b>100x trace elements solution </b></td>  <td align="center">EDTA</td>  <td align="center">5 g/L</td> <td align="center">13.4 mM</td></tr>
 +
<tr> <td align="center"></td>  <td align="center">FeCl3-6H2O</td>  <td align="center">0.83 g/L</td> <td align="center">3.1 mM</td></tr>
 +
<tr> <td align="center"></td>  <td align="center">ZnCl2</td>  <td align="center">84 mg/L</td> <td align="center">0.62 mM</td></tr>
 +
<tr> <td align="center"></td>  <td align="center">CuCl2-2H20</td>  <td align="center">13 mg/L</td> <td align="center">76 µM</td></tr>
 +
<tr> <td align="center"></td>  <td align="center">CoCl2-H2O</td>  <td align="center">10 mg/L</td> <td align="center">42 µM</td></tr>
 +
<tr> <td align="center"></td>  <td align="center">H3BO3</td>  <td align="center">10 mg/L</td> <td align="center">162 µM</td></tr>
 +
<tr> <td align="center"></td>  <td align="center">MnCl2-4H20</td>  <td align="center">1.6 mg/L</td> <td align="center">8.1 µM</td></tr>
 +
    </table>
 +
<p>      Dissolve 5g EDTA in 800 mL water and adjust the pH to 7.5 with NaOH. Then add the other components in the quantities mentioned below and add water to a final volume of 1L. Sterilize the solution over a 0.22µm filter</p>
 +
    <table border=0; style="margin-left:22px">
 +
      <col width="100">
 +
      <col width="150">
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      <col width="100">
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<tr> <td align="center"><b>100x trace elements solution </b></td>  <td align="center">EDTA</td>  <td align="center">5 g/L</td> <td align="center">13.4 mM</td></tr>
 +
<tr> <td align="center">498 mg</td>  <td align="center">FeCl3(anhydrous)</td>  <td align="center"></td></tr>
 +
<tr> <td align="center">84 mg</td>  <td align="center">ZnCl2</td>  <td align="center"></td></tr>
 +
<tr> <td align="center">765 µL</td>  <td align="center">0.1 M CuCl2-2H20</td>  <td align="center">1.70 g/100 mL</td> </tr>
 +
<tr> <td align="center">210 µL</td>  <td align="center">0.2 M CoCl2-H2O</td>  <td align="center">4.76 g/100 mL</td></tr>
 +
<tr> <td align="center">1.6 mL</td>  <td align="center">0.1 M H3BO3</td>  <td align="center">0.62 g/100 mL</td></tr>
 +
<tr> <td align="center">8.1 µL</td>  <td align="center"> 1M MnCl2-4H20</td>  <td align="center">19.8 g/100 mL</td></tr>
 +
    </table>
<br><br><br><br>
<br><br><br><br>

Revision as of 14:41, 5 September 2013






Cultivation


Chloramphenicol stock solution

-Solubilize 20 mg mL-1 Chloramphenicol in 100 % Ethanol

-Store at -20 °C


DNA loading buffer

- 50 % (v/v) glycerol

- 1 mM EDTA

- 0.1 % (w/v) bromphenol blue

- Solve in ddH2O


LB medium

- 10 g Trypton

- 5 g yeast extract

- 10 g NaCl

- 12 g Agar-Agar (for plates)

- Adjust pH to 7.4


M9 medium

For 1 L M9 mineral medium you need 867 mL sterile water (for plates add 16 g Agar-Agar as well). Then add (in the following order:

- 300 µL 1 M CaCl2

1 M CaCl2 1 M CaCl2-H20 14.70 g/100 mL

- 100 mL 5x M9 salt solution

10x M9 salt solution
Na2HPO4-2H2O 75.2 g/L
KH2PO4 30 g/L
NaCl 5 g/L
NH4Cl 5 g/L

- 20 % glucose

20 % Glucose 20 % (w/v)glucose 200 g/L

For 500 mL stock solution add 100 g glucose to 440 mL water. Autoclave for 15 at 121° C

- 1 M MgSO4

MgSO4 1 M MgSO4-7H20 24.65 g/100 mL

- 1 mL biotin (1 mg/mL)

Biotin (1 mg/mL) biotin (1 mg/mL) 50 mg/50 mL

For 50 mL stock solution dissolve 50 mg biotin in 45 mL water. Add water to a final volume of 50 mL. Sterilize the solution over a 0.22-µm filter. Prepare 1 mL aliquots and store at -20°.

- 1 mL thiamin (1 mg/mL)

Thiamin (1 mg/mL) thiamin-HCl (1 mg/mL) 50 mg/50 mL

For 50 mL stock solution dissolve 50 mg thiamin-HCl in 45 mL water. Add water to a final volume of 50 mL. Sterilize the solution over a 0.22-µm filter. Prepare 1 mL aliquots and store at -20°.

- 10 mL 100x trace elements solution

100x trace elements solution EDTA 5 g/L 13.4 mM
FeCl3-6H2O 0.83 g/L 3.1 mM
ZnCl2 84 mg/L 0.62 mM
CuCl2-2H20 13 mg/L 76 µM
CoCl2-H2O 10 mg/L 42 µM
H3BO3 10 mg/L 162 µM
MnCl2-4H20 1.6 mg/L 8.1 µM

Dissolve 5g EDTA in 800 mL water and adjust the pH to 7.5 with NaOH. Then add the other components in the quantities mentioned below and add water to a final volume of 1L. Sterilize the solution over a 0.22µm filter

100x trace elements solution EDTA 5 g/L 13.4 mM
498 mg FeCl3(anhydrous)
84 mg ZnCl2
765 µL 0.1 M CuCl2-2H20 1.70 g/100 mL
210 µL 0.2 M CoCl2-H2O 4.76 g/100 mL
1.6 mL 0.1 M H3BO3 0.62 g/100 mL
8.1 µL 1M MnCl2-4H20 19.8 g/100 mL





TAE buffer

For 1 L of 50 x TAE buffer you need:

- 242.48 g Tris

- 41.02 g Sodiumacetate

- 18.612 g EDTA

- Adjust pH to 7.8 with acetic acid

- Solve in dH2O

10 mL of the stock is diluted in 1 L dH2O for the gel electrophoresis (0.5 x TAE buffer)