Team:TU-Delft/Notebook/2013/09/19/

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2. Colony PCR was done for the following: <br>
2. Colony PCR was done for the following: <br>
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3. Restriction digestion was carried out on: <br>
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3. The lysis experiment was carried out on a plate reader for 2 colonies from the pT7 Lysis transformed into BL21 plysS to check whether on inducing the pT7 promoter with IPTG, the cells lyse. The 10 X IPTG stock was made from 1000X IPTG stock (10 µL of 1000X IPTG in 990 µL of LB Broth). The loading of samples on the 96-well plate was done as follows:<br>
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&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;    pBAD Receiver with S+P <br>
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&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;    PCR Purified SUMO Peptide Tet R with X+P <br>
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&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;    Lysis device with E+X <br>
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&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;    pcI Ulp with E+S <br><br>
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4. The lysis experiment was carried out on a plate reader for 2 colonies from the pT7 Lysis transformed into BL21 plysS to check whether on inducing the pT7 promoter with IPTG, the cells lyse. The 10 X IPTG stock was made from 1000X IPTG stock (10 µL of 1000X IPTG in 990 µL of LB Broth). The loading of samples on the 96-well plate was done as follows:<br>
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The results can be seen in the page : <a href="https://2013.igem.org/Team:TU-Delft/Killswitch#lysis_experiment" >Lysis experiment</a> <br>
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The results can be seen in the page : <a href="https://2013.igem.org/Team:TU-Delft/Killswitch#lysis_experiment" target="blank";>Lysis experiment</a> <br>
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5. Liagtions were done for : <br>
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5. Ligations were done for : <br>
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&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;      pBAD Receiver + SUMO peptide Tet R <br>
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&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;      Lysis Device + pSB1C3 <br>
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&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;      Lysis device + pSB1C3 <br>
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&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;      pTet cI TT + pSB1C3 <br>
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&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;      pBAD Ulp TT + pT7 SUMO Signiferin <br>
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&nbsp;&nbsp;&nbsp;&nbsp; &nbsp;&nbsp;&nbsp;&nbsp;      pcI Ulp + pSB1C3 <br>
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6. Reinoculated pT7 Lysis in BL21 plysS for lysis experiment on plate reader. <br>
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6. Reinoculated the colonies from the colony PCR. <br>

Latest revision as of 09:09, 4 October 2013

Notebook

June
SunMonTueWedThuFriSat
1
2 3 4 5 6 7 8
9 10 11 12 13 14 15
16 17 18 19 20 21 22
23 24 25 26 27 28 29
30
July
SunMonTueWedThuFriSat
1 2 3 4 5 6
7 8 9 10 11 12 13
14 15 16 17 18 19 20
21 22 23 24 25 26 27
28 29 30 31










August
SunMonTueWedThuFriSat
1 2 3
4 5 6 7 8 9 10
11 12 13 14 15 16 17
18 19 20 21 22 23 24
25 26 27 28 29 30 31
September
SunMonTueWedThuFriSat
1 2 3 4 5 6 7
8 9 10 11 12 13 14
15 16 17 18 19 20 21
22 23 24 25 26 27 28
29 30













19th of September


Lab work

1. Restriction digestion is started for pTet cI TT with S+P and with pcI Ulp with X+P. 2. Colony PCR was done for the following:



3. The lysis experiment was carried out on a plate reader for 2 colonies from the pT7 Lysis transformed into BL21 plysS to check whether on inducing the pT7 promoter with IPTG, the cells lyse. The 10 X IPTG stock was made from 1000X IPTG stock (10 µL of 1000X IPTG in 990 µL of LB Broth). The loading of samples on the 96-well plate was done as follows:

Lane Cells (µL) 10 X IPTG (µL) LB Broth (µL)
Lane 1 0 10 90
Lane 2 5 1 94
Lane 3 5 2 93
Lane 4 5 3 92
Lane 5 5 4 91
Lane 6 5 5 90
Lane 7 5 6 89
Lane 8 5 7 88
Lane 9 5 8 87
Lane 10 5 9 86
Lane 11 5 10 85
Lane 12 5 0 95

The results can be seen in the page : Lysis experiment
5. Ligations were done for :
          Lysis Device + pSB1C3
          pTet cI TT + pSB1C3
          pcI Ulp + pSB1C3
6. Reinoculated the colonies from the colony PCR.