Team:Uppsala/attribution

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<title>Uppsala iGEM 2013</title>
<title>Uppsala iGEM 2013</title>
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<div id="cow-box"><a href="https://2013.igem.org/Team:Uppsala"><img class="home-knapp" src="https://static.igem.org/mediawiki/2013/e/ef/Uppsala2013_Home.png"><a/></div>
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<li><a href="https://2013.igem.org/Team:Uppsala/project" id="list_type1"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/9/92/Project.png"></a>
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<li><a href="https://2013.igem.org/Team:Uppsala/project" id="list_type1"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/a/aa/Uppsala2013_Project.png"></a>
<ul>
<ul>
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<li><a href="#">Result</a></li>
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<li><a href="#">Overview</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/chassi">Chassi</a>
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<li><a href="#">Chassi</a></li>
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<ul>
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<li><a href="#">Chromoprotein collection</a></li>
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                                                                <li><a href="https://2013.igem.org/Team:Uppsala/probiotics">Probiotics</a></li>
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<li><a href="#">Safety experiments</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/promoters">Promoters</a></li>
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<li><a href="#">Resveratrol</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/reporter-genes">Reporter genes</a></li>
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<li><a href="#">Caretnoids</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/toxin-antitoxin-system">Toxin-antitoxin system</a></li>
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<li><a href="#">Saffron</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/vectors">Vectors</a></li>
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<li><a href="#">Miraculin</a></li>
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                                                                <li><a href="https://2013.igem.org/Team:Uppsala/signal-peptide">Signal peptide</a></li>
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</ul></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/modeling" id="list_type1"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/3/3c/Modeling.png"></a>
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                                                <li><a href="https://2013.igem.org/Team:Uppsala/metabolic-engineering">Metabolic engineering</a>
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                                                    <ul>
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                                                                <li><a href="https://2013.igem.org/Team:Uppsala/p-coumaric-acid">p-Coumaric acid</a></li>
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                                                                <li><a href="https://2013.igem.org/Team:Uppsala/resveratrol">Resveratrol</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/lycopene">Lycopene</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/betacarotene">β-carotene</a></li>
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                                                                <li><a
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href="https://2013.igem.org/Team:Uppsala/saffron">Saffron</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/astaxanthin">Astaxanthin</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/zeaxanthin">Zeaxanthin</a></li>
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</ul></li>
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</li>
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                                                <li><a
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href="https://2013.igem.org/Team:Uppsala/miraculin">Miraculin</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/chromoproteins">Chromoproteins</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/safety-experiment">Safety experiment</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/results">Results</a></li>
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</ul></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/modeling" id="list_type1"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/6/63/Uppsala2013_Modeling.png"></a>
<ul>
<ul>
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<li><a href="#">Resveratrol pathway</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/P-Coumaric-acid-pathway">Kinetic model</a></li>
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<li><a href="#">Carotenoids pathway</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/modeling-tutorial">Modeling tutorial </a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/toxicity-model">Toxicity model</a></li>
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</ul></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/parts" id="list_type2"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/7/79/Parts.png"></a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/parts" id="list_type2"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/e/eb/Uppsala2013_parts.png"></a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/team" id="list_type2"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/3/32/Team.png"></a>
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<li><a href="https://2013.igem.org/Team:Uppsala/team" id="list_type2"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/a/a7/Uppsala2013_Team.png"></a>
<ul>
<ul>
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<li><a href="#">Resveratrol group</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/resveratrol-group">Resveratrol group</a></li>
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<li><a href="#">Carotenoid group</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/carotenoid-group">Carotenoid group</a></li>
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<li><a href="#">Chassi group</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/chassi-group">Chassi group</a></li>
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<li><a href="#">Instructors & supervisors</a></li>
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                                                <li><a href="https://2013.igem.org/Team:Uppsala/advisors">Advisors</a></li>
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</ul></li>
</ul></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/hp" id="list_type3"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/f/f5/HP.png"></a>
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<li><a href="https://2013.igem.org/Team:Uppsala/human-practice" id="list_type3"><img class="nav-text"       src="https://static.igem.org/mediawiki/2013/b/b8/Uppsala2013_HP.png"></a>
<ul>
<ul>
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<li><a href="#">Yoghurt products</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/yoghurt">Yoghurt +</a></li>
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<li><a href="#">Synbioday</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/synbioday">SynBioDay</a></li>
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<li><a href="#">Bioethics</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/biosafety-and-ethics">Biosafety and ethics</a></li>
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<li><a href="#">Safety</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/public-opinion">Public opinion </a></li>
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<li><a href="#">Society / Public opinion</a></li>
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                                                <li><a href="https://2013.igem.org/Team:Uppsala/Outreach">High school & media </a></li>
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<li><a href="#">High School Outreach</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/bioart">BioArt</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/LactonutritiousWorld">A LactoWorld</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/killswitches">Killswitches</a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/realization">Patent</a></li>
</ul></li>
</ul></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/attribution" id="list_type4"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/8/8d/Attributions.png"></a></li>  
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<li><a href="https://2013.igem.org/Team:Uppsala/attribution" id="list_type4"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/5/5d/Uppsala2013_Attributions.png"></a></li>  
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<li><a href="https://2013.igem.org/Team:Uppsala/notebook" id="list_type3"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/9/95/Notebook.png"></a></li>
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<li><a href="https://2013.igem.org/Team:Uppsala/notebook" id="list_type3"><img class="nav-text" src="https://static.igem.org/mediawiki/2013/3/36/Uppsala2013_Notebook.png"></a>
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                                    <ul>
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                                        <li><a href="https://2013.igem.org/Team:Uppsala/safety-form">Safety form</a></li>
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                                        <li><a href="https://2013.igem.org/Team:Uppsala/protocols">Protocols</a></li>
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                                    </ul></li>
</ul>
</ul>
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<div id="attribution_title"> <h1> Attributions <h1> </div>
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      <h1 class="main-title">Collaboration</h1>
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All of the work that was done during this project was both planned and executed by our iGEM team members. It all started of with some brainstorming sessions that began in the middle of May, although the actual lab work began in the beginning of June.
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During the summer we have worked very closely with the <a href="https://2013.igem.org/Team:Linkoping_Sweden"> Linköpings iGEM team 2013 </a>. Since it was their first year to participate in the competition we decided to do our best to provide them with any assistance they needed, such as providing them with parts, knowledge etc.
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In addition to assisting Linköpings iGEM team we have also sent biobricks to the following iGEM teams:
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<br>
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<br>
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</div>
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iGEM 2013 <a href="https://2013.igem.org/Team:UT-Tokyo"> UT-Tokyo: </a> <br>
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<a href="http://parts.igem.org/Part:BBa_K592010"> BBa_K592010 </a> - amilGFP, yellow chromoprotein <br>
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<a href="http://parts.igem.org/Part:BBa_K864401">  BBa_K864401 </a> - aeBlue, blue chromoprotein <br>
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<br>
 +
 +
iGEM 2013 <a href="https://2013.igem.org/Team:Braunschweig"> Braunschweig: </a> <br>
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<a href="http://parts.igem.org/Part:BBa_K1033930">BBa_K1033930</a> - amilCP, blue/purple chromoprotein (incl RBS) <br>
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<a href="http://parts.igem.org/Part:BBa_K592010"> BBa_K592010 </a> - amilGFP, yellow chromoprotein <br>
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<a href="http://parts.igem.org/Part:BBa_K592012"> BBa_K592012 </a> - eforRed, red/pink chromoprotein <br>
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<a href="http://parts.igem.org/Part:BBa_K592011"> BBa_K592011 </a> - cjBlue, green chromoprotein<br>
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<a href="http://parts.igem.org/Part:BBa_K864401">  BBa_K864401 </a> - aeBlue, blue chromoprotein <br>
 +
 +
<br>
 +
 +
iGEM 2013 <a href="https://2013.igem.org/Team:Tsinghua"> Tsinghua: </a>  <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592010"> BBa_K592010 </a> - amilGFP, yellow chromoprotein <br>
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<a href="http://parts.igem.org/Part:BBa_K592012"> BBa_K592012 </a> - eforRed, red/pink chromoprotein <br>
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<a href="http://parts.igem.org/Part:BBa_K592011"> BBa_K592011 </a> - cjBlue, green chromoprotein<br>
 +
<a href="http://parts.igem.org/Part:BBa_K864401">  BBa_K864401 </a> - aeBlue, blue chromoprotein <br>
 +
<a href="http://parts.igem.org/Part:BBa_K1033930">BBa_K1033930</a> - amilCP, blue/purple chromoprotein (incl RBS) <br>
 +
 +
<br>
 +
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iGEM 2013 <a href="https://2013.igem.org/Team:CU-Boulder"> CU Boulder: </a> <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592010"> BBa_K592010 </a> - amilGFP, yellow chromoprotein <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592012"> BBa_K592012 </a> - eforRed, red/pink chromoprotein <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592011"> BBa_K592011 </a> - cjBlue, green chromoprotein<br>
 +
<a href="http://parts.igem.org/Part:BBa_K864401">  BBa_K864401 </a> - aeBlue, blue chromoprotein <br>
 +
<a href="http://parts.igem.org/Part:BBa_K1033930">BBa_K1033930</a> - amilCP, blue/purple chromoprotein (incl RBS) <br>
 +
 +
<br>
 +
 +
iGEM 2013 <a href="https://2013.igem.org/Team:uOttawa"> uOttawa: </a>  <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592010"> BBa_K592010 </a> - amilGFP, yellow chromoprotein <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592012"> BBa_K592012 </a> - eforRed, red/pink chromoprotein <br>
 +
 +
<br>
 +
 +
iGEM 2013 <a href="https://2013.igem.org/Team:HokkaidoU_Japan"> HokkaidoU: </a> <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592009"> BBa_K592009 </a> - amilCP, blue chromoprotein (incl RBS) <br>
 +
<a href="http://parts.igem.org/Part:BBa_K1033931">BBa_K1033931</a> - amilGFP, yellow chromoprotein (incl RBS) <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592010"> BBa_K592010 </a> - amilGFP, yellow chromoprotein <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592012"> BBa_K592012 </a> - eforRed, red/pink chromoprotein <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592011"> BBa_K592011 </a> - cjBlue, green chromoprotein<br>
 +
<a href="http://parts.igem.org/Part:BBa_K864401">  BBa_K864401 </a> - aeBlue, blue chromoprotein <br>
 +
 +
<br>
 +
 +
iGEM 2013 <a href="https://2013.igem.org/Team:TU_Darmstadt"> TU Darmstadt: </a>  <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592012"> BBa_K592012 </a> - eforRed, red/pink chromoprotein <br>
 +
<a href="http://parts.igem.org/Part:BBa_K592011"> BBa_K592011 </a> - cjBlue, green chromoprotein<br>
 +
<a href="http://parts.igem.org/Part:BBa_K1033929">BBa_K1033929</a> - aeBlue, blue chromoprotein (incl RBS) <br>
 +
<a href="http://parts.igem.org/Part:BBa_K1033928">BBa_K1033928</a> - aeBlue, blue chromoprotein (incl RBS, J23110) <br>
 +
<a href="http://parts.igem.org/Part:BBa_K1033903"> BBa_K1033903 </a> - tsPurple, purple chromoprotein (incl RBS, J23110) <br>
 +
<a href="http://parts.igem.org/Part:BBa_K1033930">BBa_K1033930</a> - amilCP, blue/purple chromoprotein (incl RBS) <br>
 +
<a href="http://parts.igem.org/Part:BBa_K1033931">BBa_K1033931</a> - amilGFP, yellow chromoprotein (incl RBS) <br>
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 +
<br>
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 +
<h1> A special thanks </h1>
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 +
We would also like to thank other sources that have helped us, such as the <a href="https://2010.igem.org/Team:Slovenia"> Slovenian iGEM team 2010 </a> that supplied us with the genes needed for the production of carotenoid metabolites, <a href="https://2012.igem.org/Team:TU_Munich"> TU-Munichs iGEM team 2012 </a> that provided us with the gene 4CL for the production of 4-coumaryl-CoA, and <a href= "https://2012.igem.org/Team:WashU"> Wahington University's 2012 iGEM team WashU </a> that enabled our work with the saffron pathway. Last but not least we would also like to thank the School of chemical and Biomolecular Engineering, Cornell University for providing us with the genes involved in the production of the phenylpropanoid pathway. The article can be found at; <a href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3287197/pdf/gkr888.pdf"> Conrado RJ, Mori J et al (2011) </a>
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<h1> Other collaborations </h1>
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In addition to this we would also like to mention some fascinating requests that have been made by external sources:
 +
<ul>
 +
<li> Nature reviews request to display our chromoproteins on their <a href="http://www.nature.com/nrmicro/journal/v11/n10/covers/index.html"> front page </a> for their 10 year anniversary. </li>
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<li>National Aeronautics and Space Administrations (NASA) biotechnology department requested our chromoproteins as reporter genes for a project that is currently being worked on. </li>
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</ul>
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Latest revision as of 20:01, 27 October 2013

Collaboration

All of the work that was done during this project was both planned and executed by our iGEM team members. It all started of with some brainstorming sessions that began in the middle of May, although the actual lab work began in the beginning of June.

During the summer we have worked very closely with the Linköpings iGEM team 2013 . Since it was their first year to participate in the competition we decided to do our best to provide them with any assistance they needed, such as providing them with parts, knowledge etc.

In addition to assisting Linköpings iGEM team we have also sent biobricks to the following iGEM teams:

iGEM 2013 UT-Tokyo:
BBa_K592010 - amilGFP, yellow chromoprotein
BBa_K864401 - aeBlue, blue chromoprotein

iGEM 2013 Braunschweig:
BBa_K1033930 - amilCP, blue/purple chromoprotein (incl RBS)
BBa_K592010 - amilGFP, yellow chromoprotein
BBa_K592012 - eforRed, red/pink chromoprotein
BBa_K592011 - cjBlue, green chromoprotein
BBa_K864401 - aeBlue, blue chromoprotein

iGEM 2013 Tsinghua:
BBa_K592010 - amilGFP, yellow chromoprotein
BBa_K592012 - eforRed, red/pink chromoprotein
BBa_K592011 - cjBlue, green chromoprotein
BBa_K864401 - aeBlue, blue chromoprotein
BBa_K1033930 - amilCP, blue/purple chromoprotein (incl RBS)

iGEM 2013 CU Boulder:
BBa_K592010 - amilGFP, yellow chromoprotein
BBa_K592012 - eforRed, red/pink chromoprotein
BBa_K592011 - cjBlue, green chromoprotein
BBa_K864401 - aeBlue, blue chromoprotein
BBa_K1033930 - amilCP, blue/purple chromoprotein (incl RBS)

iGEM 2013 uOttawa:
BBa_K592010 - amilGFP, yellow chromoprotein
BBa_K592012 - eforRed, red/pink chromoprotein

iGEM 2013 HokkaidoU:
BBa_K592009 - amilCP, blue chromoprotein (incl RBS)
BBa_K1033931 - amilGFP, yellow chromoprotein (incl RBS)
BBa_K592010 - amilGFP, yellow chromoprotein
BBa_K592012 - eforRed, red/pink chromoprotein
BBa_K592011 - cjBlue, green chromoprotein
BBa_K864401 - aeBlue, blue chromoprotein

iGEM 2013 TU Darmstadt:
BBa_K592012 - eforRed, red/pink chromoprotein
BBa_K592011 - cjBlue, green chromoprotein
BBa_K1033929 - aeBlue, blue chromoprotein (incl RBS)
BBa_K1033928 - aeBlue, blue chromoprotein (incl RBS, J23110)
BBa_K1033903 - tsPurple, purple chromoprotein (incl RBS, J23110)
BBa_K1033930 - amilCP, blue/purple chromoprotein (incl RBS)
BBa_K1033931 - amilGFP, yellow chromoprotein (incl RBS)

A special thanks

We would also like to thank other sources that have helped us, such as the Slovenian iGEM team 2010 that supplied us with the genes needed for the production of carotenoid metabolites, TU-Munichs iGEM team 2012 that provided us with the gene 4CL for the production of 4-coumaryl-CoA, and Wahington University's 2012 iGEM team WashU that enabled our work with the saffron pathway. Last but not least we would also like to thank the School of chemical and Biomolecular Engineering, Cornell University for providing us with the genes involved in the production of the phenylpropanoid pathway. The article can be found at; Conrado RJ, Mori J et al (2011)

Other collaborations

In addition to this we would also like to mention some fascinating requests that have been made by external sources:
  • Nature reviews request to display our chromoproteins on their front page for their 10 year anniversary.
  • National Aeronautics and Space Administrations (NASA) biotechnology department requested our chromoproteins as reporter genes for a project that is currently being worked on.

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