Team:Warsaw/Glossary

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{{:Team:Warsaw/Templates/StandardPageBegin|Project description}}
{{:Team:Warsaw/Templates/StandardPageBegin|Project description}}
__TOC__
__TOC__
-
 
==A==
==A==
* '''acrylamide''' – our subject of study
* '''acrylamide''' – our subject of study
Line 8: Line 7:
==C==
==C==
* '''cloning''' – on pSB1C3 of course!
* '''cloning''' – on pSB1C3 of course!
 +
* '''calm resignation''' – general mood two days prior to wiki freeze (see 'panic attack')
 +
*m'''Cherry''' - red fluorescent protein. We managed to succesfully clone C- and N-terminal BiFC fragments into pSB1C3 and deliver them to the Registry
 +
==D==
==D==
-
* '''despair''' - general mood in the few days prior to wiki freeze
+
* '''despair''' - general mood week prior to wiki freeze (see 'calm resignation')
==E==
==E==
-
* '''ethanol''' – lots of ethanol in cell lab (take a deep breath ladies and gentelmen)
+
* '''ethanol''' – lots of ethanol in cell lab (take a deep breath ladies and gentelmen - unless one of you is the designated driver)
==F==
==F==
 +
* '''FedEx''' - delivery services, which tried to take our precious samples, results of our hard work
* '''FluoSafe''' – our project
* '''FluoSafe''' – our project
 +
==G==
==G==
 +
* Airport de '''Gaulle'a''' - the place, where our parts got held up a few hours too long
* '''Generacja Przyszłości (eng. ''Generation of the Future'')''' – our grant
* '''Generacja Przyszłości (eng. ''Generation of the Future'')''' – our grant
 +
==H==
==H==
* '''HeLa and HEK''' – cells we worked with
* '''HeLa and HEK''' – cells we worked with
Line 23: Line 29:
==I==
==I==
-
* '''irritation''' - when this **** C-6 and C-12 cannot clone in pSB1C3 plasmid!
+
* '''irritation''' - when this **** C-m6 and C-m12 cannot clone in pSB1C3 plasmid!
==J==
==J==
-
* '''jamboree''' - we waiting for it
+
* '''Jamboree''' - we're waiting for it
==K==
==K==
-
* '''kill-switch''' - our safety witch wasn't synthetized on time
+
* '''kill-switch''' - our safety system which wasn't synthetized on time (see: 'lysis device' and 'MinC')
==L==
==L==
 +
* '''Lyon''' - we can send you postcard from jamboree
 +
* '''lysis device''' - another component of our kill-switch (see: 'MinC')
 +
==M==
==M==
-
* '''MinC''' - core of our kill-switch
+
* '''MinC''' - core of our kill-switch. Inhibits bacterial division.
==N==
==N==
 +
*'''N-terminal valine''' - acrylamide forms adducts on the N-terminus of hemoglobin alpha and beta chains. Adducts interfere with tetramer formation. We attempted to take advantage of this property while designing the hemoglobin-based acrylamide sensor.
 +
==O==
==O==
 +
*m'''Orange''' - we nearly managed to produce BiFC fragments form this fluorescent protein
 +
==P==
==P==
* '''PCR''' – polymerase chain reaction
* '''PCR''' – polymerase chain reaction
 +
* '''panic attack''' – begins approximately 12 h prior to wiki freeze
 +
==Q==
==Q==
 +
*'''questionable''' - large portion of our clones and PCR products
 +
==R==
==R==
* '''roGFP''' - redox-sensitive GFP
* '''roGFP''' - redox-sensitive GFP
==S==
==S==
-
* '''superfolder proteins'''
+
* '''superfolder proteins''' - improved derivatives of ''A. victoria''-based fluorescent proteins (green, yellow, blue and cyan). This part of our project actually succeded. They're brighter, fun to work with and considerably more stable (as a poet once said: 'harder, better, faster, stronger' - and our work with them still isn't over)
 +
 
==T==
==T==
* '''Toolbox (BiFC's)''' - one of our goals
* '''Toolbox (BiFC's)''' - one of our goals
==U==
==U==
 +
* '''ultraviolet''' - and GFP glows
 +
* '''The Unknown Sample''' - not all abbreviations are as obvious now as there were a month ago...
 +
==V==
==V==
* '''vacation''' - in lab all the time!
* '''vacation''' - in lab all the time!
==W==
==W==
-
* '''wirówka (eng. ''centrifuge'')''' – that we unintentionally! broke
+
* '''wirówka (eng. ''centrifuge'')''' – that we unintentionally broke!
 +
* '''wiki freeze''' – the ultimate deadline (see: "despair', 'calm resignation' and 'panic attack')
 +
 
==X==
==X==
 +
*'''X-Files''' - paranormal no longer seems impressive, once you've seen some of our results...
 +
==Y==
==Y==
 +
* '''yellow fluorescent proteins (sfYFP and SYFP2)''' - and their glowing rivalry!
 +
==Z==
==Z==
 +
*'''Zombie walk''' - team departs the lab following wiki freeze
{{:Team:Warsaw/Templates/StandardPageEnd}}
{{:Team:Warsaw/Templates/StandardPageEnd}}

Latest revision as of 03:46, 5 October 2013

Project description

Contents

A

  • acrylamide – our subject of study

B

  • BiFC – Bimolecular Fluorescent Complementation

C

  • cloning – on pSB1C3 of course!
  • calm resignation – general mood two days prior to wiki freeze (see 'panic attack')
  • mCherry - red fluorescent protein. We managed to succesfully clone C- and N-terminal BiFC fragments into pSB1C3 and deliver them to the Registry

D

  • despair - general mood week prior to wiki freeze (see 'calm resignation')

E

  • ethanol – lots of ethanol in cell lab (take a deep breath ladies and gentelmen - unless one of you is the designated driver)

F

  • FedEx - delivery services, which tried to take our precious samples, results of our hard work
  • FluoSafe – our project

G

  • Airport de Gaulle'a - the place, where our parts got held up a few hours too long
  • Generacja Przyszłości (eng. Generation of the Future) – our grant

H

  • HeLa and HEK – cells we worked with
  • hemoglobin - core of our sensor

I

  • irritation - when this **** C-m6 and C-m12 cannot clone in pSB1C3 plasmid!

J

  • Jamboree - we're waiting for it

K

  • kill-switch - our safety system which wasn't synthetized on time (see: 'lysis device' and 'MinC')

L

  • Lyon - we can send you postcard from jamboree
  • lysis device - another component of our kill-switch (see: 'MinC')

M

  • MinC - core of our kill-switch. Inhibits bacterial division.

N

  • N-terminal valine - acrylamide forms adducts on the N-terminus of hemoglobin alpha and beta chains. Adducts interfere with tetramer formation. We attempted to take advantage of this property while designing the hemoglobin-based acrylamide sensor.

O

  • mOrange - we nearly managed to produce BiFC fragments form this fluorescent protein

P

  • PCR – polymerase chain reaction
  • panic attack – begins approximately 12 h prior to wiki freeze

Q

  • questionable - large portion of our clones and PCR products

R

  • roGFP - redox-sensitive GFP

S

  • superfolder proteins - improved derivatives of A. victoria-based fluorescent proteins (green, yellow, blue and cyan). This part of our project actually succeded. They're brighter, fun to work with and considerably more stable (as a poet once said: 'harder, better, faster, stronger' - and our work with them still isn't over)

T

  • Toolbox (BiFC's) - one of our goals

U

  • ultraviolet - and GFP glows
  • The Unknown Sample - not all abbreviations are as obvious now as there were a month ago...

V

  • vacation - in lab all the time!

W

  • wirówka (eng. centrifuge) – that we unintentionally broke!
  • wiki freeze – the ultimate deadline (see: "despair', 'calm resignation' and 'panic attack')

X

  • X-Files - paranormal no longer seems impressive, once you've seen some of our results...

Y

  • yellow fluorescent proteins (sfYFP and SYFP2) - and their glowing rivalry!

Z

  • Zombie walk - team departs the lab following wiki freeze