Team:Calgary/Notebook/Protocols/GibsonAssembly
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Gibson Assembly
Gibson Assembly
Protocol
- Assembly fragments were designed to have 35-40bp overhanging regions of complementary in the primers
- PCR fragments were generated using a KAPA HiFi polymerase reaction. Fragments were verified on an agarose gel and treated with DpnI restriction enzyme
- The following reaction was set up: 0.5 pmols of linear fragments, at least two fold excess of inserts and 75ng of vector backbone; 10μL of 2x NEB Gibson assembly master mix; water to bring entire reaction to 20μL
- Gibson reaction was run in a thermocycler at 50°C for 1 hour
- 2μL of the above reaction was transformed into NEB 5-alpha competent E.coli
- Cells on plates were subsequently screened using standard colony PCR and verification digest methods