Team:Paris Saclay/Notebook/April/20

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{{Team:Paris_Saclay/incl_debut_generique}}
{{Team:Paris_Saclay/incl_debut_generique}}
='''Notebook : April 20'''=
='''Notebook : April 20'''=
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=='''General meeeting'''==
 
=='''Week end Brainstorming : 20&21 April 2013'''==
=='''Week end Brainstorming : 20&21 April 2013'''==
People there :  
People there :  
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Instructors and advisors : Sylvie, Philippe, Nguyen, Solenne
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* Instructors and advisors : Sylvie, Philippe, Nguyen, Solenne
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Students : Pierre-Louis, Gabriel, Zhou,  Nima,  Andy,  Damir, Kevin,  Jean-Rémy,  Xavier, Caroline, Anaïs, Eric, Abdou.
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* Students : Pierre-Louis, Gabriel, Zhou,  Nima,  Andy,  Damir, Kevin,  Jean-Rémy,  Xavier, Caroline, Anaïs, Eric, Abdou.
==='''Saturday 20th April :'''===
==='''Saturday 20th April :'''===
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'''<u>2. Proposition of projects</u> '''
'''<u>2. Proposition of projects</u> '''
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<u>a) Caroline’s Project : Seine’s depollution</u>  
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'''<u>a) Caroline’s Project : Seine’s depollution</u>'''
'''Problematic:''' PCBs are toxic, ecotoxic, carcinogenic and presents in the Seine in sediments.
'''Problematic:''' PCBs are toxic, ecotoxic, carcinogenic and presents in the Seine in sediments.
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'''Pros and cons :'''  
'''Pros and cons :'''  
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{| class="wikitable centre" width="80%"
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Seine = our environment to save Natural bacteria did it, why do it with E.Coli ?
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|+  
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Burkoderia Xenovorans : one way, 2 gens : easier Can it work ?
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|-
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Complete subject : chemistrie, biology, ethics … PCBs are in sediments, how to degrade it ?  
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! scope=col | +
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Concentration of PCBs in water too small
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! scope=col | -
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|-
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| width="33%" |
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Seine = our environment to save  
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| width="34%" |
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Natural bacteria did it, why do it with ''E. coli'' ?
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|-
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| width="33%" |
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''Burkoderia Xenovorans'' : one way, 2 gens : easier
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| width="34%" |
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Can it work ?
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|-
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| width="33%" |
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Complete subject : chemistrie, biology, ethics …
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| width="34%" |
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PCBs are in sediments, how to degrade it ?  
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|}
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 +
 
 +
 
'''Contacting ideas :''' Mr. Dubow to visit a water treatment plant
'''Contacting ideas :''' Mr. Dubow to visit a water treatment plant
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http://www.futura-sciences.com/fr/news/t/developpement-durable-1/d/pollution-fluviale-au-pcb-une-etude-sonne-lalerte_15709
http://www.futura-sciences.com/fr/news/t/developpement-durable-1/d/pollution-fluviale-au-pcb-une-etude-sonne-lalerte_15709
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<u>b) Nima’s Project</u>
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'''<u>b) Nima’s Project</u>'''
'''Problematic:''' Cambridge 2007 BOL : Bacteria Online https://2007.igem.org/wiki/index.php/Project  
'''Problematic:''' Cambridge 2007 BOL : Bacteria Online https://2007.igem.org/wiki/index.php/Project  
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'''Pros and Cons :'''  
'''Pros and Cons :'''  
-
+ -
 
-
Utility ?
 
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{| class="wikitable centre" width="80%"
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|+
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|-
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! scope=col | +
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! scope=col | -
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|-
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| width="33%" |
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Interristing subject and original
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| width="34%" |
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utility ?
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|}
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<u>c) N Guyen’s proposition : detection of Cs</u>
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'''<u>c) Nguyen’s proposition : detection of Cs</u>'''
'''Questions :'''  
'''Questions :'''  
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- Receptors known ?
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- Known Receptors ?
- Reaction that can be developed ?  
- Reaction that can be developed ?  
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Pros and cons :  
Pros and cons :  
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Tc and LA : radioactive forms
 
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Can we make the difference between Cs and radioactive Cs ?
 
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Cs present in our environment
 
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==='''Sunday 21th April : '''===
 
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Voting
 
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Seine pollution biobits Biotime keeper Cs detection
 
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Votes number 13 5 0 0
 
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arguments We can make it
 
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Interesting reflexion on the project for HP
 
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Interdisciplinary
 
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Social problem
 
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Attractive for sponsors Interesting
 
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We can take over biobricks
 
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Original
 
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{| class="wikitable centre" width="80%"
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|+
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|-
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! scope=col | +
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! scope=col | -
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|-
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| width="33%" |
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Environment project : attractiv
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| width="34%" |
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Tc and LA : radioactive forms
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|-
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| width="33%" |
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concrete utility
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| width="34%" |
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Can we make the difference between Cs and radioactive Cs ?
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|}
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Depollution Project adopted !
 
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<br>
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{| border="1" align="center"
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|[[Team:Paris_Saclay/Notebook|<big>Back to calendar</big>]]
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|[[Team:Paris Saclay/Notebook/April/21|<big>Next day</big>]]
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|}
{{Team:Paris_Saclay/incl_fin}}
{{Team:Paris_Saclay/incl_fin}}

Latest revision as of 23:55, 4 October 2013

Navigation Home Team Project Labwork Notebook Human practices

Notebook : April 20

Week end Brainstorming : 20&21 April 2013

People there :

  • Instructors and advisors : Sylvie, Philippe, Nguyen, Solenne
  • Students : Pierre-Louis, Gabriel, Zhou, Nima, Andy, Damir, Kevin, Jean-Rémy, Xavier, Caroline, Anaïs, Eric, Abdou.

Saturday 20th April :

1. Presentation of the simulation’s software of Damir

This is a htlm page that Damir did to follow any biological systems. This simple software can be use by everybody if they know the different constants of their system. (adresse ip) - Very good idea, we can develop it at the same time that the scientific project - Look if others software were done by igem teams - Find constants in literacy - Find people to help Damir

2. Proposition of projects

a) Caroline’s Project : Seine’s depollution

Problematic: PCBs are toxic, ecotoxic, carcinogenic and presents in the Seine in sediments.


The idea: create a biological system that can detect and degrade PCBs Others iGEM team worked on it : Clemson 2012, Lethbridge 2008 Bielfield 2012


Questions: - What chassis ?

- What genes and enzymes ? burkoderia, pseudomonas, http://www.ncbi.nlm.nih.gov/pubmed/23529656

- Can it possible to do ? Not to hard ? there a lot a genes and enzymes to combine

- Kind of action of the PCBs ?

- Safety : how to limit the spreading of the bacteria? Gemote ?


Pros and cons :

+ -

Seine = our environment to save

Natural bacteria did it, why do it with E. coli ?

Burkoderia Xenovorans : one way, 2 gens : easier

Can it work ?

Complete subject : chemistrie, biology, ethics …

PCBs are in sediments, how to degrade it ?



Contacting ideas : Mr. Dubow to visit a water treatment plant http://www.futura-sciences.com/fr/news/t/developpement-durable-1/d/pcb-la-frnce-contaminee_31534 http://www.futura-sciences.com/fr/news/t/developpement-durable-1/d/pollution-fluviale-au-pcb-une-etude-sonne-lalerte_15709

b) Nima’s Project

Problematic: Cambridge 2007 BOL : Bacteria Online https://2007.igem.org/wiki/index.php/Project


Idea : Make a analogy between internet and synbiology : intern and extern communication. Creation of an amplification system of flux with a binary system

Questions: - Degradation of the signal

- Order of the signals

- Storage of the signal

- How to restart the signal ?


Pros and Cons :

+ -

Interristing subject and original

utility ?


c) Nguyen’s proposition : detection of Cs


Questions :

- Known Receptors  ?

- Reaction that can be developed ?


Pros and cons :

+ -

Environment project : attractiv

Tc and LA : radioactive forms

concrete utility

Can we make the difference between Cs and radioactive Cs ?



Back to calendar Next day

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