Team:Heidelberg/Project/AchievementsSoftware

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<div class="container">
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        <div id="header">
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                        <h1 style="display:inline-block"><span style="font-size:150%;color:#333333;"> Achievements.</span> <span class="text-muted" style="font-size:90%">Medal Requirements for Software Teams.</span></h1>
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                            /(bb|[^b]{2})/
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                <div class="col-sm-12" style="text-align:justify">
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                  Although our team did not register as a software team we strongly believe in the concept of standardizing the workflow of software development. We not only want other teams to be able to use our software for the Design of NRP sequences but also give them the opportunity to further develop the software and deploy it for their complementary tools. In this respect, we aimed to fulfill all software requirements raised in iGEM. In addition, we tried to contact well-know scientists in the field of NRPS research to get as much feedback as possible to improve our software according to the current needs. For this reason, we contacted Mohamed Marahiel who responded positively to our approach: <b><i>'I&nbsp;was very impressed by the project performance and the excellent work all of you have realized until now.’</i></b> Jacques Ravel -founder of the Maryland tool- said about our software: <b><i>‘[...] there is no questions, that something like this is very much needed!’</i></b> Well, we think there is nothing much to add but: Enjoy creating your own synthetic NRP with the <a href="http://igem2013.bioquant.uni-heidelberg.de/NRPSDesigner/" >NRPSDesigner</a>!
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    </div>
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    <div class="row" style="margin-top:4%; display:table-row;">
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        <div id="bronzemedal" class="medal">
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            <h8><b>Bronze Medal</b> Requirements</h8>
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            <div>
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                <div class="requirement">
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                    <span class="check"></span>
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                    <span class="requirement">Team is registered!</span>
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                    <span class="btn btn-default btn-lg medal-requirement glyphicon glyphicon-hand-right" style="font-size: 11px;" data-title="iGEM Team Heidelberg" data-content='The Team Heidelberg is finally back in the iGEM competition this year. If you want to know more about our team visit our &lt;a href="https://2013.igem.org/Team:Heidelberg/Team"&gt;&lt;b&gt;team-page&lt;/b&gt;&lt;/a&gt;!'></span>
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                </div>
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                <div class="requirement">
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                    <span class="check"></span>
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                    <span class="requirement">Project description of the Philosopher's Stone online!</span>
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                    <span class="btn btn-default btn-lg medal-requirement glyphicon glyphicon-hand-right" style="font-size: 11px;" data-title="Project description" data-content='Our project description is available on the &lt;a href="https://2013.igem.org/Team:Heidelberg/Project"&gt;&lt;b&gt;Project website&lt;/b&gt; &lt;/a&gt; were you can also get a basic overview.'></span>
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                </div>
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                <div class="requirement">
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                    <span class="check"></span>
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                    <span class="requirement">Poster is prepared for the European Jamboree in Lyon!</span>
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                    <span class="btn btn-default btn-lg medal-requirement glyphicon glyphicon-hand-right" style="font-size: 11px;" data-title="Poster presentation at European jamboree" data-content='We are looking forward to see you at the poster presentation!'></span>
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                </div>
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                <div class="requirement">
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                    <span class="check"></span>
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                    <span class="requirement">NRPSDesigner software is in the Registry of Software Tools!</span>
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                    <span class="btn btn-default btn-lg medal-requirement glyphicon glyphicon-hand-right" style="font-size: 11px;" data-title="Source code" data-content='The NRPSDesigner source code and installation instructions are available on &lt;a href="https://github.com/igemsoftware/Heidelberg_2013"&gt;&lt;b&gt;GitHub&lt;/b&gt;&lt;/a&gt;!'></span>
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                </div>
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            </div>
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        </div>
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        <div id="silvermedal" class="medal">
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            <h8><b>Silver Medal</b> Requirements</h8>
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            <div>
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                <div class="requirement">
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                    <span class="check"></span>
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                    <span class="requirement">Draft of the next version is available!</span>
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                    <span class="btn btn-default btn-lg medal-requirement glyphicon glyphicon-hand-right" style="font-size: 11px;"  data-title="NRPSDesigner 1.1 and 2.0"  data-placement="bottom" data-content='A &lt;a href="/Team:Heidelberg/Project_Software#outlook"&gt;&lt;b&gt;draft specification&lt;/b&gt;&lt;/a&gt; of the next minor and major NRPSDesigner version was developed.'></span>
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                </div>
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                <div class="requirement">
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                    <span class="check"></span>
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                    <span class="requirement">A video tutorial is online!</span>
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                    <span class="btn btn-default btn-lg medal-requirement glyphicon glyphicon-hand-right" style="font-size: 11px;" data-placement="bottom"  data-title="Video tutorial" data-content=''></span>
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                </div>
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            </div>
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        </div>
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            <div id="goldmedal" class="medal">
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            <h8><b>Gold Medal</b> Requirements</h8>
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            <div>
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                <div class="requirement">
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                    <span class="check"></span>
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                    <span class="requirement">Another iGEM team used our software!</span>
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                    <span class="btn btn-default btn-lg medal-requirement glyphicon glyphicon-hand-right" style="font-size: 11px;" data-title="Collaboration" data-placement="left" data-content="The &lt;a href='/Team:Edinburgh/Collaboration#heidelberg'&gt;&lt;b&gt;Edinburgh iGEM team&lt;/b&gt;&lt;/a&gt; used the NRPSDesigner with the Enterobactin and Bacillibactin pathways."></span>
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                </div>
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                <div class="requirement">
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                    <span class="check"></span>
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                    <span class="requirement">SBOL is used!</span>
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                    <span  class="btn btn-default btn-lg medal-requirement glyphicon glyphicon-hand-right" style="font-size: 11px;" data-title="SBOL" data-placement="left"  data-content='The back-end and front-end of the NRPSDesigner communicate using the &lt;a href="/Team:Heidelberg/OpenSource#sbol"&gt;&lt;b&gt;SBOL&lt;/b&gt;&lt;/a&gt; standard. Additionally, users can download their designed constructs in SBOL format.'></span>
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                </div>
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                <div class="requirement">
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                    <span class="requirement">Open Source!</span>
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                    <span  class="btn btn-default btn-lg medal-requirement glyphicon glyphicon-hand-right" style="font-size: 11px;" data-title="Gibthon" data-placement="left"  data-content='NRPSDesigner includes a customized version of the &lt;a href="http://gibthon.org"&gt;&lt;b&gt;Gibthon construct designer&lt;/b&gt;&lt;/a&gt; by iGEM Cambridge &lt;a href="https://2010.igem.org/Team:Cambridge"&gt;2010&lt;/a&gt; and &lt;a href="https://2011.igem.org/Team:Cambridge"&gt;2011&lt;/a&gt;.'></span>
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Latest revision as of 23:59, 28 October 2013

Although our team did not register as a software team we strongly believe in the concept of standardizing the workflow of software development. We not only want other teams to be able to use our software for the Design of NRP sequences but also give them the opportunity to further develop the software and deploy it for their complementary tools. In this respect, we aimed to fulfill all software requirements raised in iGEM. In addition, we tried to contact well-know scientists in the field of NRPS research to get as much feedback as possible to improve our software according to the current needs. For this reason, we contacted Mohamed Marahiel who responded positively to our approach: 'I was very impressed by the project performance and the excellent work all of you have realized until now.’ Jacques Ravel -founder of the Maryland tool- said about our software: ‘[...] there is no questions, that something like this is very much needed!’ Well, we think there is nothing much to add but: Enjoy creating your own synthetic NRP with the NRPSDesigner!
Bronze Medal Requirements
Team is registered!
Project description of the Philosopher's Stone online!
Poster is prepared for the European Jamboree in Lyon!
NRPSDesigner software is in the Registry of Software Tools!
Silver Medal Requirements
Draft of the next version is available!
A video tutorial is online!
Gold Medal Requirements
Another iGEM team used our software!
SBOL is used!
Open Source!
Thanks to

Retrieved from "http://2013.igem.org/Team:Heidelberg/Project/AchievementsSoftware"